Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00108 TATTTTGCAGATTGTTACGACCCTTTGGATCCAAATGGAAACATTACAGTTACTTTTGACATCCATTCATGGACACCAGGTGGCTATTTGGCGAGAGTGACTATCCAGAATTACTATCTCTATCGACATGTCAACCAGCCTGGTTGGAACTTGGGGTGGACATGGAGAAATCAGGAGATAATTTTGTCGATGAAAGGTGCTTTTGCTACAAAGCAAGGAAATTGTTCATCTTTCAAGTTTGAGGAACAAGCACCACACTCCTGCGAGAAGAATCCTCGAGTACTCGATCTCTTGCCTGAAGCCTCCCCGGAAAATCGATCGGAGAACTGCTGTAGAGCCGGCCTTCTGTCTGCTTTGGCTACTGACCCTTCCAAGTCATTCTCGTCTTTTGACATTAGAGTTGGCAACTTGGGTTCAAATAATTCAGAGCAACCTCCAGCCAATCTCACTCTACTTGCACCCAGTCGAGGTTACACTTGTAGCCCTCTCGTGGACACAGATCCATCTGTTTCTTCAGTCATCGGAGGAAGAAGGAAAATTCAGGTTTACAGAACATGGAAATCGACCTGCACTTACTCGAACTTTTTGGCAAATAAAACACCCGTTTGTTGTGTTTCTCTCTCTACATTTTACAATCCGAAGGTCACTCCATGTCCATTGTGTAGCTGTGGATGCAGAGACATGGATCAAACCACTGTTTCATGTATAAGGCCTTCGTCATCGATATCGTCATTATCGTCCTTGAATTCTAAGGATGGTCTGGACATGGTCCGATGCACAGACCATATGTGCCCGGTTGGAGTCCATTGGCATATAAAGAACAATTATGTAGATCATTGGAGGGTTAAACTGACAGTTTCTAACTATAACTATAACAGGAGCTACACAGATTGGAACATCCTGGTTCAACATCCTGGTTTTCGACAGCCAACAAGAACATTTAGCTTCAACAGTTCAGCTATTCCATCTGTTGCATATGAAGATGCAGTAGCTGTATTTTGGGGGATAGAATCGTATAATATTGAGCTATTGCAGGCCGATGCGGAGAAAGTTGGTTTTGTGACGACGGAGATACTGCTGAGGAAAGATCCGGAGTCTTTCACTCTGAGCAACGGCTGGGGTTTTCCTCGAAGAATATACTTCAATGGCGACGACTGTCAAATGTCTTTGCCGAATTCCTTTCCGACGTTGCCGAATTCTAGTTTTAAGAATCATCCTTCTTCTTTGATCTTCCTACTGTTCTTCTTTGTCTTGTGCATGTAA 1263 43.63 YFADCYDPLDPNGNITVTFDIHSWTPGGYLARVTIQNYYLYRHVNQPGWNLGWTWRNQEIILSMKGAFATKQGNCSSFKFEEQAPHSCEKNPRVLDLLPEASPENRSENCCRAGLLSALATDPSKSFSSFDIRVGNLGSNNSEQPPANLTLLAPSRGYTCSPLVDTDPSVSSVIGGRRKIQVYRTWKSTCTYSNFLANKTPVCCVSLSTFYNPKVTPCPLCSCGCRDMDQTTVSCIRPSSSISSLSSLNSKDGLDMVRCTDHMCPVGVHWHIKNNYVDHWRVKLTVSNYNYNRSYTDWNILVQHPGFRQPTRTFSFNSSAIPSVAYEDAVAVFWGIESYNIELLQADAEKVGFVTTEILLRKDPESFTLSNGWGFPRRIYFNGDDCQMSLPNSFPTLPNSSFKNHPSSLIFLLFFFVLCM 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 775393 777147 + Bpe005348.1 Bpe12g00108 112121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00108 420 PANTHER COBRA-LIKE PROTEIN 3 417 - -
Bpe12g00108 420 PANTHER PROTEIN COBRA 3 417 IPR006918 GO:0010215|GO:0031225
Bpe12g00108 420 PIRSF COBRA 1 420 IPR006918 GO:0010215|GO:0031225
Bpe12g00108 420 Pfam COBRA-like protein 29 193 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00746 Bpe12g00108 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00047 Bpe-Chr11:339267 Bpe12g00108 Bpe-Chr12:775393 8.24E-131 dispersed
Bpe12g00108 Bpe-Chr12:775393 Bpe12g00518 Bpe-Chr12:11027190 1.34E-132 dispersed
Bpe12g00108 Bpe-Chr12:775393 Bpe07g00746 Bpe-Chr7:13997688 1.59E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00108 - - jre:109006563 595.119