Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00111 ATGTCGGCAAAAGTGTCTCCATGGGCAAAGCCTGGTGCTTGGGCTCTCGATTCGGAAGAGCACGAAGCCGAACTTCTTGCAGAAACTCAACAAAACCAGAACGGTCACCCTACCTCTGATTTTCCCTCTCTAGCCGCGGCCGCCGCCAAACCGAAGAAGAAGAAAGGCCAAACCATCTCCTTAGCCGAGTTTACTACCTATGGAGGTCCCAAGCCTCCAGCTTTCTCCACCCAGCCAGCGGGTCTCACCCGCGAAGATCTCCTGAATCTTCCCACTGGCCCTCGTGAGAGAACTGCTGAGGAGCTTGACCGGAGTCGGCTCGGCGGTGGGTTCAGGAATTACGGCTCGAATGGTTCTTATGATCGGAGCAATAGATACTCCACTAGCGATGATTCGTCTAATTCGAGATGGGGTTCGTCTAGGGTTTCTGATGAGACGAGGAGGAGCAATGGTGGTTTTGGAAAGGAATTTGCGAGGGAAGCGGCTCCATCTAGGGCTGATGAGATAGACAACTGGGCTGCGGGGAAAAGGCCAATTGTGAGCAATGGGTTTGAGAAGAGGGACAAAGGATGGTTTTCTGATACTGCGTCCTCAAAAGCAGACGAATCTGATAGCTGGGTTTCTAGCAAGAGCTTTAGACCTTCGGAGACTCGGAAATTCAGTAGCAATGGGAGTTTTGACCGAGAACGGAGAGGAGGAGGGTTCACCTCTAATGTGGCTGGGGTTGACTCGGATAAGTGGGGGAAGAAGGAGGGTATTATTGCTAGAAGCGTAGGTGAGAGACCGAGGCTTAATTTGCAACCTCGTACTGTGCCTCTAAGCAATGATGGAAAGCCAGAGGTTTTAGAGAACATGGCAAAGCCTAAAGTTTCCAATCCGTTCGGGGAGGCGAGGCCAAGAGAGGAGGTTTTGGCGGGAAAGGGACAAGATTGGAAGAAGATTGATGAGCAGTTTGGGTTGATGAAGGTAAAGGATGCGGAGAATGTGGAAAAGCTTAATGGAGACTCTCATTGGAAAAGAAGTTCCGACAATGGGATTAGCAGGCTCTCTGAAGATCGAGCTGAGAGAACTTGGAGGAAGCCTGATTCCGTAGAGACTCATCCCAAAAGGTTGGTTCATCTAGTATCTTGA 1131 50.57 MSAKVSPWAKPGAWALDSEEHEAELLAETQQNQNGHPTSDFPSLAAAAAKPKKKKGQTISLAEFTTYGGPKPPAFSTQPAGLTREDLLNLPTGPRERTAEELDRSRLGGGFRNYGSNGSYDRSNRYSTSDDSSNSRWGSSRVSDETRRSNGGFGKEFAREAAPSRADEIDNWAAGKRPIVSNGFEKRDKGWFSDTASSKADESDSWVSSKSFRPSETRKFSSNGSFDRERRGGGFTSNVAGVDSDKWGKKEGIIARSVGERPRLNLQPRTVPLSNDGKPEVLENMAKPKVSNPFGEARPREEVLAGKGQDWKKIDEQFGLMKVKDAENVEKLNGDSHWKRSSDNGISRLSEDRAERTWRKPDSVETHPKRLVHLVS 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 798647 799777 + Bpe005351.1 Bpe12g00111 112124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00111 376 MobiDBLite consensus disorder prediction 294 308 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 148 170 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 183 242 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 116 147 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 259 308 - -
Bpe12g00111 376 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 365 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 329 376 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 196 221 - -
Bpe12g00111 376 MobiDBLite consensus disorder prediction 1 170 - -
Bpe12g00111 376 Pfam Plant specific eukaryotic initiation factor 4B 7 322 IPR010433 GO:0003743
Bpe12g00111 376 MobiDBLite consensus disorder prediction 329 369 - -
Bpe12g00111 376 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 365 IPR010433 GO:0003743
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00111 Bpe15g00825 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00801 Bpe-Chr10:14145213 Bpe12g00111 Bpe-Chr12:798647 1.18E-33 dispersed
Bpe12g00111 Bpe-Chr12:798647 Bpe15g00825 Bpe-Chr15:18337642 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00111 - - cmo:103497303 408.297