Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00129 ATGTTATCGAAATTAGTAAACTTGCTGACGGCCTGTTTCCGGTCTCGGTCGGATGGAATAGTCGGTTCCGTAGCCGGATTCAGACAGGAAGGGATGCTTTGGTACAAAGACATCGGACATCATCTGAACGGTGAGTTTTCAATGGCTGTAGTTCAAGCCAACAATTTACTCGAGGATCAGAGCCAGGTTGAGTCGGGAAGCTTGAGCTCGAATGATTCTGGTCCGTATGGTGTATTTGTGGGCGTATACGACGGCCATGGAGGACCCGAGGCTTCTCGCTATCTAACCGACCACCTCTTACAACATCTCAAGAGGTTTGCTTCTGAGAGCCGCTCCATGTCTGTTGACGTAATTCGCAAGGCAATTCAAGCAACCGAGGAGGGTTTTACAGCTCTGGTCGCAGAACAATGGCAGATGAAACCGCGAATCGCAACTGTTGGATCTTGCTGTCTCGTCGGGGTCATATGCAGCGAATATCTTTACATCGCCAACCTCGGCGATTCTCGTGCTGTTTTGGGACGAGAGATGAAAGAGACGGGGGAGGTTCTGGCGATTCAATTGTCAGCCGAGCACAATGCGAGTATAGAGTCTGTGAGACAAGAGCTGCAATCTTTGCATCCCGATGACTCAGAAATTGTCGTCTTGAAGCATAACGTTTGGCGCGTTAAGGGTCTGATTCAGATTTCTCATTCTATTGGCGACGTGTATCTAAAAAACCCTGAGTTCAATCGAGAACCTCCGTACAAAAAGTTCAGCCTCCGCAAATCGTCCAATAAGCCGATTTTGAGCTCAGAACCTTCCATTTCCGCGGTTCAGTTGCAAGCACACGATCGATTTATTATATTTGCATCGGACGGCCTCTGGGAACAGTTGACCAATCAGGAAGCAGTTGATATAGTTCAGCAACAACCACATAGTGGAAGTGCAAGGAGGGTGGTGAGAGCTGCTATGCAAGAAGCAGCAAGGAAGAGAGAAATGAGATATTCCGACTTGAAGAAGATCCATAGAGGGGTCCGGAGGCATTTCCACGATGATATCACGGTGATTATCGTATTTCTCGACTCTAACTTGATTTGCCGGGCGTGCTCGGCAAAGGGTTCGACTGTGTCAGTGAGAGGAGGGGGAATTCATCTCCCACATAACACCTTGATCCCC 1155 48.57 MLSKLVNLLTACFRSRSDGIVGSVAGFRQEGMLWYKDIGHHLNGEFSMAVVQANNLLEDQSQVESGSLSSNDSGPYGVFVGVYDGHGGPEASRYLTDHLLQHLKRFASESRSMSVDVIRKAIQATEEGFTALVAEQWQMKPRIATVGSCCLVGVICSEYLYIANLGDSRAVLGREMKETGEVLAIQLSAEHNASIESVRQELQSLHPDDSEIVVLKHNVWRVKGLIQISHSIGDVYLKNPEFNREPPYKKFSLRKSSNKPILSSEPSISAVQLQAHDRFIIFASDGLWEQLTNQEAVDIVQQQPHSGSARRVVRAAMQEAARKREMRYSDLKKIHRGVRRHFHDDITVIIVFLDSNLICRACSAKGSTVSVRGGGIHLPHNTLIP 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 923008 924741 + Bpe024873 Bpe12g00129 112142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00129 385 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
Bpe12g00129 385 Gene3D - 35 360 IPR036457 -
Bpe12g00129 385 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Bpe12g00129 385 PANTHER ALPHABET, ISOFORM E-RELATED 6 381 - -
Bpe12g00129 385 SUPERFAMILY PP2C-like 54 354 IPR036457 -
Bpe12g00129 385 SMART PP2C_4 37 351 IPR001932 -
Bpe12g00129 385 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 381 - -
Bpe12g00129 385 CDD PP2Cc 46 353 IPR001932 -
Bpe12g00129 385 Pfam Protein phosphatase 2C 71 323 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00296 Bpe12g00129 CCT
Bpe12g00129 Bpe15g00803 CCT
Bpe07g00712 Bpe12g00129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00799 Bpe-Chr5:21338717 Bpe12g00129 Bpe-Chr12:923008 1.85E-143 dispersed
Bpe12g00129 Bpe-Chr12:923008 Bpe15g01084 Bpe-Chr15:20034102 1.07E-163 dispersed
Bpe12g00129 Bpe-Chr12:923008 Bpe15g00803 Bpe-Chr15:18230296 0 wgd
Bpe12g00129 Bpe-Chr12:923008 Bpe05g00296 Bpe-Chr5:16261037 0 wgd
Bpe12g00129 Bpe-Chr12:923008 Bpe07g00712 Bpe-Chr7:13703790 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00129 - K01102 pop:7453657 595.89