Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00139 ATGGCCTGGTTTCTCTGGTTTCTCTTCTTTCTATTTTCGTCTGTAACTGCTTGCGATCGCTGCGTTCATCAATCCAGAGCTGCTTATTTCTCTAAAGCTTCAGCTCTTTCGGTTGGAGCTTGTGGATATGGCTCTTTGGCATTGGGCTTTAACAGTGGACACCTTGCTGCTGGTGTGCCTACCCTTTACAAGGAAGGAGCTGGCTGTGGCGCTTGCTTTCAGATAAGATGCAAGAACACCAATCTCTGCTCAAGAACGGGAACTAAAGTGATATTGACCGATCTCAACACAGATAACCAAACAGATTTTGTTCTGACTAGCAGAGCCTTTGCTGCAATGGCTCAAAAGGGCAAGGACAAGGACATTCTGAAACGTGGAATTGTCGACGTCGAATACAAGAGAGTACCATGCGAGTATAAAAATCAAAACTTGGGCGTGCGAGTGGAAGAATCAAGCAAAAAACCATATTATCTAGCAATCAAATTCCTAAACCAGGGCGGCCAAACAGAAATAGTGGGCGTTGATGTAGCTCGGGTGGGTTCGTCAAATTGGAGCTTCCTGAGTAGAAACCATGGCGCAGTGTGGGATACAAGTAGAGTACCAGACGGAGCCCTGCAATTTCGAATGGTGGTGACTTCTGGGTACGATGGAAAATGGATTTGGGCGAAGAGTGTTCTTCCAGAAGACTGGAAATCAGGCGTCACTTATGATTCTGGAGTTCAAATCGATGACATTGCACAAGAGGGTTGCTTTCCTTGCGACCAAGGACATTGGAAATGA 780 46.03 MAWFLWFLFFLFSSVTACDRCVHQSRAAYFSKASALSVGACGYGSLALGFNSGHLAAGVPTLYKEGAGCGACFQIRCKNTNLCSRTGTKVILTDLNTDNQTDFVLTSRAFAAMAQKGKDKDILKRGIVDVEYKRVPCEYKNQNLGVRVEESSKKPYYLAIKFLNQGGQTEIVGVDVARVGSSNWSFLSRNHGAVWDTSRVPDGALQFRMVVTSGYDGKWIWAKSVLPEDWKSGVTYDSGVQIDDIAQEGCFPCDQGHWK 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1030370 1031927 + Bpe005379.1 Bpe12g00139 112152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00139 259 SUPERFAMILY PHL pollen allergen 142 238 IPR036749 -
Bpe12g00139 259 SUPERFAMILY Barwin-like endoglucanases 7 141 IPR036908 -
Bpe12g00139 259 SMART dpbb_1 56 132 IPR007112 -
Bpe12g00139 259 Pfam Expansin C-terminal domain 146 227 IPR007117 -
Bpe12g00139 259 Gene3D - 139 242 IPR036749 -
Bpe12g00139 259 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Bpe12g00139 259 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Bpe12g00139 259 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Bpe12g00139 259 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Bpe12g00139 259 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Bpe12g00139 259 PANTHER EXPANSIN-LIKE A1-RELATED 5 255 - -
Bpe12g00139 259 Pfam Lytic transglycolase 56 132 IPR009009 -
Bpe12g00139 259 Gene3D - 12 138 IPR036908 -
Bpe12g00139 259 PANTHER EXPANSIN-B3 5 255 - -
Bpe12g00139 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 238 IPR007117 -
Bpe12g00139 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00625 Bpe-Chr11:4802085 Bpe12g00139 Bpe-Chr12:1030370 5.33E-34 dispersed
Bpe12g00139 Bpe-Chr12:1030370 Bpe14g00659 Bpe-Chr14:5299134 7.49E-31 dispersed
Bpe12g00139 Bpe-Chr12:1030370 Bpe15g00792 Bpe-Chr15:18164351 2.36E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00139 - - hbr:110657210 427.172