Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00152 ATGAATTTGTATGATCTTTTTTCTCTTTGTGACAGGGGGCTTGACTTTATCATTCTCATCATAAATATGGTTTTGGTCGTTTTGTCATTTATTCTCTGCTTCTTAACACTCTCAGAAGAGGTCTCCAGACCTGATGTCGTGGAAGTCGGGGCTATTATTACATTTGGCACCATTAATGGAGAAGTCTCGAAAATTGCATTGAAGGCTGCTGAAAATGATGTGAATTCTGATCCGAGCATTCTTGGGCGGAGTAAATTGTCCATATCCATGTACAACTCCAACTTCAGTGGTTTTCTTGGAATTATTGGGGCATTAAACTACATGGAGTCTAATACTGTAGCTATAATTGGTCCACAAAGCTCGGTGTTGGCTCATGCACTAGCCCCTCTTGCAAATGAGCTTCACATCCCCTTGTTGTCATTTACAGCCCTCGACCCTGCTCTTTCTTCTTTACAGTATCCATACTTTGTTCAAACAGCTCCAAATGATAAGTTCCAGATGACCGCCATTGCAGATATGATTAGTTATTACGGTTGGGGCGAGGTTATTGCCATTTATAGTGATGATGATCAGAGCCGAAATGGTATAAGTGCATTAGGCGACAAGCTTGTGCAGATAAGCTGCAAATTTTCCTACAAAGCAGCCCTTCCTCCTGACCCGACATCTACCAGGTTTCAAGTGCAGCACGAATTAATGAAAATTAAAATGATGGAAACTCGAGTAATTGTGCTGAACACCTTCAATACTACAGGTCTCTTGGTTTTTGACGTTGCCAAAAATCTGGGAATGATGGAAAGTGGGTATGTCTGGATTACTTCGACCTGGCTATCCACAGTTTTGGATTCAACTTCGCCACTTTCTACCAAGATTGCTGAGTCTGTCCAAGGTGTTCTCACGCTTCGACCACACACCCTGGATTCAAAAGGAAAAAAATCTTTCATATCGCGATGGAACAAACTTAGTAACGGCTCCATTGGATTGAATCCTTATGGTCTCTATGCATATGATACCGTTTGGATGATTGCTCGTGCAGTGAAAAGGTTATTTGATCAAGGAGGTACTATTTCATTTTCCAATTCTGCATATTATAGCAATCTTGGGGAAGGGACCATGAATTTTAGTGCTTTAAGCATATTTGATGAAGGAGAGCAATTGCTTAACAACATATTGAAGACCAATATGACTGGCCTGACAGGGTCTATTCAATTTACTTCGGACAGATCCTTTTTATACCCTTCCTATGACATTATAAATGTAATGAAAACAGGTTATCAACGAATTGGATACTGGTCTAACTATTCTGGATTGTCTGTTTTGCCTCCTGAGACATTATATGGAAAACAATACAACCTTTCAAACCAATTTCTGAGCGATGTAATATGGTCTGGAGGTACAACAACAAAGCCTCGTGGATGGATTTTTCAAAACAATGGGATGCCATTAAGAATTGGTGTTCCAAAGAGAGCTAGTTTTCGTGAGTTTGTCTCTCAAGTTAACGGCACCAGTGCAGTCCAAGGATATTGCATTGATGTTTTTCTTGCTGCCATAAAACTACTTCCTTATCCAGTTCCTTATGAATTTATTTTGGTCGGAGATGGTCGTGAAAATCCAAGCTACGATGAACTTGTAAATATGGTCACATCTGGGACCATTGATGGTGCTGTAGGTGATATTGCTATTGACACAACGCGATCAAAGGCTGTGGATTTCACTCAACCTTATGCAGAGTCAGGGCTCGTGGTGGTGGCTCGGGTCAAAAAGTTGAATTCTAGTGCTTGGGTATTTACAAAGCCATTTACGCTAATGATGTGGATGGTCATCTTACTTTTGTTTCTCATTGTTGGAGCAGTTGTGTGGATTCTAGAACATAGAAGAAATGACGAGTTCCAAGGGCCACCTAGTAAACAAATTGCTACAATTTGCTGGTTTAGCTTCTGCACTATGTTTTTTGCGCATAGAGAAAATATGGTGAGCTCACTTGGTCGCATGGTGCTAATCGTCTGGCTCTTTGTCGTTCAAATCATCACCTCAAGCTACACTGCTAGCCTGACCTCAATACTCACAGTGCAACAGCTTTCCTCACCCATCTCTGGGATTGAAACTTTAATAACTAGCGATGTGCCCATAGGATTCCAAGTAGGTTCTTTTGCAGAAAACTATTTGAACAAGGAGCTGGATATCCCGAAATCAAGGCTTATCGCTCTTGGCACCCCAGAAGATTATGCTAATGCCCTCGATAGAGGAATTGTCGGTGCTGTGGTTGATGAAAAGCCATACATTGAACTCTTTCTGTCTGAATATTGCAAATTCTCTGTCAGAGGACAGGAGTTCACAAGAAGGGGGTGGGGATTTGCATTTCCACAAGGGTCGCATTTGGCCGTTGATATGTCGACTGCAATTCTCACGCTATCAGAGAACGGAAATCTTCGAAAAATTCATGAAAAATGGTTTACAAGGGAAGGTTGCAGTGGTCAAAGTGCTGAAGTTGTTGATCAGCTTCGTTTACAAAGCTTCGGGGGAATATTCATCATTTGCGTAGTTTCCTGTTTTTTTGCTTTATTTATACATTTCTGTATCATCTTCTACAAGTTCAGGCAACATAACAAAGAGGGCCCGGATTCTCCGATCGTACAAACTTCTCGCTCCCCCTGCCTTCAAACTTTCATTTGCTTTATTGATAGAAAGGAAGACGAGCAGAAAAGCAAGCCTAAATGCAAGCATTTAGATGGAGAATAA 2736 41.19 MNLYDLFSLCDRGLDFIILIINMVLVVLSFILCFLTLSEEVSRPDVVEVGAIITFGTINGEVSKIALKAAENDVNSDPSILGRSKLSISMYNSNFSGFLGIIGALNYMESNTVAIIGPQSSVLAHALAPLANELHIPLLSFTALDPALSSLQYPYFVQTAPNDKFQMTAIADMISYYGWGEVIAIYSDDDQSRNGISALGDKLVQISCKFSYKAALPPDPTSTRFQVQHELMKIKMMETRVIVLNTFNTTGLLVFDVAKNLGMMESGYVWITSTWLSTVLDSTSPLSTKIAESVQGVLTLRPHTLDSKGKKSFISRWNKLSNGSIGLNPYGLYAYDTVWMIARAVKRLFDQGGTISFSNSAYYSNLGEGTMNFSALSIFDEGEQLLNNILKTNMTGLTGSIQFTSDRSFLYPSYDIINVMKTGYQRIGYWSNYSGLSVLPPETLYGKQYNLSNQFLSDVIWSGGTTTKPRGWIFQNNGMPLRIGVPKRASFREFVSQVNGTSAVQGYCIDVFLAAIKLLPYPVPYEFILVGDGRENPSYDELVNMVTSGTIDGAVGDIAIDTTRSKAVDFTQPYAESGLVVVARVKKLNSSAWVFTKPFTLMMWMVILLLFLIVGAVVWILEHRRNDEFQGPPSKQIATICWFSFCTMFFAHRENMVSSLGRMVLIVWLFVVQIITSSYTASLTSILTVQQLSSPISGIETLITSDVPIGFQVGSFAENYLNKELDIPKSRLIALGTPEDYANALDRGIVGAVVDEKPYIELFLSEYCKFSVRGQEFTRRGWGFAFPQGSHLAVDMSTAILTLSENGNLRKIHEKWFTREGCSGQSAEVVDQLRLQSFGGIFIICVVSCFFALFIHFCIIFYKFRQHNKEGPDSPIVQTSRSPCLQTFICFIDRKEDEQKSKPKCKHLDGE 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1122423 1126867 + Bpe005389.2 Bpe12g00152 112165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00152 911 SMART GluR_14 482 819 IPR001320 GO:0015276|GO:0016020
Bpe12g00152 911 PIRSF IGluLR_plant 18 907 IPR017103 -
Bpe12g00152 911 Gene3D - 162 436 - -
Bpe12g00152 911 CDD PBP1_GABAb_receptor_plant 49 438 IPR044440 -
Bpe12g00152 911 SUPERFAMILY Periplasmic binding protein-like II 459 819 - -
Bpe12g00152 911 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 901 - -
Bpe12g00152 911 Gene3D - 65 411 - -
Bpe12g00152 911 Pfam Receptor family ligand binding region 65 419 IPR001828 -
Bpe12g00152 911 Pfam Ligand-gated ion channel 819 848 IPR001320 GO:0015276|GO:0016020
Bpe12g00152 911 CDD GluR_Plant 480 817 - -
Bpe12g00152 911 Gene3D - 476 590 - -
Bpe12g00152 911 Gene3D - 759 824 - -
Bpe12g00152 911 Gene3D - 591 722 - -
Bpe12g00152 911 SUPERFAMILY Periplasmic binding protein-like I 42 472 IPR028082 -
Bpe12g00152 911 Pfam Bacterial extracellular solute-binding proteins, family 3 501 818 IPR001638 -
Bpe12g00152 911 PANTHER GLUTAMATE RECEPTOR 3.3 29 901 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00162 Bpe-Chr6:3173812 Bpe12g00152 Bpe-Chr12:1122423 0 dispersed
Bpe07g00608 Bpe-Chr7:12814747 Bpe12g00152 Bpe-Chr12:1122423 8.46E-06 dispersed
Bpe12g00152 Bpe-Chr12:1122423 Bpe14g00389 Bpe-Chr14:3656201 2.81E-107 dispersed
Bpe12g00152 Bpe-Chr12:1122423 Bpe14g00707 Bpe-Chr14:5512767 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00152 K05387 - rcu:8270549 1237.25