Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00162 ATGGCATTTGAAAGCGAAAACACTATCGCTTCAATGGCGGACTACAAAGATCATGTATCTTCATTGAATAATTTAACAGAAGCGAGAATTGCAACTACAGAATTAGGATTAGAAACGAAGCCAGAAGCAGGAGAGGGAAGCGTCGGAGCCATGATACGAAACATGAAGAGAGAACGGGAGGACGGAAATCCGAGCGAAAATGCAGAAGAGGGATCAGAATTGACTGAGAAATCACCGGGGGAGACGTCCCCTGCGTTTTCGCATGGGTTGAAAGACGCTTTGGCTGGGCTTCAACAAGCATTTGTGGTTTCTGACGCTACCAAACCAGACTGTCCTATTTTTTGCGCTAGTACTGGGTTTTTAACCATGACTGGCTATTCTTCAGAGGAAGTCATTGGAAGGAACTGTCGATTTCTGCAGGGACCAGAGACAGACAAGAATGAAGTGGACAAAATCAGAGACGCCATTAAAAATGAAAAGAGCTACTGTGGAAGGCTCTTGAACTACAGGAAAAATGGCTCTTCTTTCTGGAATCTTCTGACCATAGCCCCCATCAGAGATGATCTTGGCAAAGTCATCTTATTTATTGGAATGCAGGTGGAGGTGAAAAAATTCGATGTGAAGGACAAGCCATTGCATCCAAATGAGTTGGCAAAGTCTCCAATTAGTCAGGGTACTTCTCAAAAGGAGAGTGTTTTGGGCTCAATTACAGAGGTTGTTCAGACTGAGCTTGACTTTGTTTTGCCCGAGTCTGCTGAAGCTGACAATTTTAATGAGGACCATAGAGATTACTTTCCTCGGTCGAGGTCCTACGTTGATAGAGGCAAGATATCTAGATTATCACGTAGCATTTCCTTTAAGGGAGAACGGTCTATGTCTCTCAGCCTTCCAGGGAAATATAATCAACTTCCTGAAATCGAACAACATGTTTTAACGTCCAAGAATGTTTTAAGTACCGAAAGTTTAGATTATTTTGAAAGAGAAGCAGAAAGAAGCCAAGGAATTGATTTAGCAACTGCATTAGAGCGGTTTGAAAAGAATTTTGTGATTACAGATCCCAGACTTCCTGATAACCCGATCATATTTGCATCTGATAGCTTTCTTAGATTGACAGAATATTCACGCAAAGAAATTTTGGGAAGAAACTGTCGATTTCTTCAAGGAGTTGAAACAGATCAAGCAACTGTCTCAAACATAAGCTATGCTATCAGAGGACAGAAAGAAATTACTGTTCAATTGTTAAACTATACAAAGAGTGGTAAAAAATTTTGGAATTTATTCCACTTGCAACCAATGCGCCATCAGAAGGGTGATCTCCAATACTTTATCGGTGTCCAACTTGATGTCAGCAGTTATGTAAATCCTTCAACGAAACTGCTGTCAGACAAAACAGAGCAAGAAAATGTTTTTATGGTCAAAAGCATTGCAGAAAAAGTTGACAAGGCTGTCAGAAAACTTCCTAATGCTCACTTGAGGCTGGAGGAATTGATGTTAATTTATTCTCAGCCAATCTTCCCAAGGCCTCACAAGAAGGACACTCCTTCTTGGGTGGAAATACAAAAGATTACAGCACGTGGTGAGAAAATTGGGCTTCAGCATTTTAAGCCAATTAAACCATTAGGATATGGAGACGCCGGAAGTGTACATCTGGTGGAATTGGAAGGCACGAGCGAACTTTATGCAGTGAAAGCAATGAAAAAATCGATTCACCGAGCGTGCACCGAGAGGGAAATAATTGCACTTCTCGATCATCCTTTTCTTCCAACCTTGTACTCTTCATTTCAGACTCCGACACATTTTTGTTTGGTAACGGATTTTTATCCTGGTGGAGAGTTATTTGACTTGCTTGACAAGCAGCCAATGAAAATGTTTAATGAGGAATCTGCAAGATTTTATGCTGCAGAGGTTGTGGTTGGCTTGGAGTACCTTCACTGTTTAGGGATTATTTATAGAGACCTGAAGCCTGAGAATATATTACTTCAGAAAGATGGTCATGTTGTATTGACCGACTTTGATTTATCATTAAATACATCGTGTAGAATGCAGATTATGAATCTTCCTTCATCTAAAAGTAGGAGATATAAGAATCAAACACCGATGCTAGTAGTCAAACCAGTTTTGCAATCAAGTTCTTTTGTTGGAACTGAAGAGTACATAGCCCCTATGCTGGATTTGCAGGAAATTATTGCCGGTACAGATCACACGAGCTCTATAGATTGGTGGTCTCTGGGTATTTTGTTGTATGAGATGCTCTATGGCTGTACCCCTTTCAAGGGAAAGGACAGGCAGGAGACATTTTCCAACATATTGCAGAAAGATGTTACATTTCCGAGTAGTATATTGGTAAGTCGAACTGCAATACAGTTCATTAAAGCATTGCTGCAGAAAGACCCAGCCGATCGTTTAGGATCAAGTACTGGCGCCATTGAAATCAAACAGCACCCTTTTTTCCAGAGAATCAATTGGCCACTTATCCGTTGCATGGTATTAATTCTTTCCCCTTCGTCAAATATAAAAGTTTTAAAATTTCTTGTCAGTAGCCACCCTCTTATTCTTTATGTGCAGACTCCACCTCCATTGGAGGTCCCTCTTCAGGTGATCGAACGAGTTCAAAAGGCAAAAATCCTGACGAAGGAGGAACACCCTCTTGTGAGTCAACGTCGTCGATGCAATGGGAGAGTCACAAATGAAAATGTTGATAGCATTTTGGGTTGA 2715 40.92 MAFESENTIASMADYKDHVSSLNNLTEARIATTELGLETKPEAGEGSVGAMIRNMKREREDGNPSENAEEGSELTEKSPGETSPAFSHGLKDALAGLQQAFVVSDATKPDCPIFCASTGFLTMTGYSSEEVIGRNCRFLQGPETDKNEVDKIRDAIKNEKSYCGRLLNYRKNGSSFWNLLTIAPIRDDLGKVILFIGMQVEVKKFDVKDKPLHPNELAKSPISQGTSQKESVLGSITEVVQTELDFVLPESAEADNFNEDHRDYFPRSRSYVDRGKISRLSRSISFKGERSMSLSLPGKYNQLPEIEQHVLTSKNVLSTESLDYFEREAERSQGIDLATALERFEKNFVITDPRLPDNPIIFASDSFLRLTEYSRKEILGRNCRFLQGVETDQATVSNISYAIRGQKEITVQLLNYTKSGKKFWNLFHLQPMRHQKGDLQYFIGVQLDVSSYVNPSTKLLSDKTEQENVFMVKSIAEKVDKAVRKLPNAHLRLEELMLIYSQPIFPRPHKKDTPSWVEIQKITARGEKIGLQHFKPIKPLGYGDAGSVHLVELEGTSELYAVKAMKKSIHRACTEREIIALLDHPFLPTLYSSFQTPTHFCLVTDFYPGGELFDLLDKQPMKMFNEESARFYAAEVVVGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSLNTSCRMQIMNLPSSKSRRYKNQTPMLVVKPVLQSSSFVGTEEYIAPMLDLQEIIAGTDHTSSIDWWSLGILLYEMLYGCTPFKGKDRQETFSNILQKDVTFPSSILVSRTAIQFIKALLQKDPADRLGSSTGAIEIKQHPFFQRINWPLIRCMVLILSPSSNIKVLKFLVSSHPLILYVQTPPPLEVPLQVIERVQKAKILTKEEHPLVSQRRRCNGRVTNENVDSILG 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1210384 1219148 - Bpe005399.3 Bpe12g00162 112175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00162 904 PANTHER BNAA02G07840D PROTEIN 58 827 - -
Bpe12g00162 904 Gene3D PAS domain 322 486 - -
Bpe12g00162 904 Pfam Protein kinase domain 536 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00162 904 ProSiteProfiles PAC domain profile. 160 214 IPR000700 -
Bpe12g00162 904 CDD PAS 348 449 IPR000014 -
Bpe12g00162 904 SMART serkin_6 534 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00162 904 SUPERFAMILY Protein kinase-like (PK-like) 510 855 IPR011009 -
Bpe12g00162 904 CDD PAS 116 202 IPR000014 -
Bpe12g00162 904 TIGRFAM sensory_box: PAS domain S-box protein 116 198 IPR000014 -
Bpe12g00162 904 TIGRFAM sensory_box: PAS domain S-box protein 358 451 IPR000014 -
Bpe12g00162 904 CDD STKc_phototropin_like 532 828 - -
Bpe12g00162 904 Pfam PAS domain 107 201 IPR000014 -
Bpe12g00162 904 Pfam PAS domain 356 450 IPR000014 -
Bpe12g00162 904 Gene3D PAS domain 100 261 - -
Bpe12g00162 904 MobiDBLite consensus disorder prediction 56 88 - -
Bpe12g00162 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Bpe12g00162 904 ProSiteProfiles PAC domain profile. 407 461 IPR000700 -
Bpe12g00162 904 SMART pac_2 410 452 IPR001610 -
Bpe12g00162 904 SMART pac_2 163 205 IPR001610 -
Bpe12g00162 904 ProSiteProfiles PAS repeat profile. 90 159 IPR000014 -
Bpe12g00162 904 Gene3D Transferase(Phosphotransferase) domain 1 611 824 - -
Bpe12g00162 904 Gene3D Phosphorylase Kinase; domain 1 533 610 - -
Bpe12g00162 904 SUPERFAMILY PYP-like sensor domain (PAS domain) 107 199 IPR035965 -
Bpe12g00162 904 SUPERFAMILY PYP-like sensor domain (PAS domain) 349 449 IPR035965 -
Bpe12g00162 904 PANTHER FLIPPASE KINASE 1-RELATED 58 827 - -
Bpe12g00162 904 ProSiteProfiles Protein kinase domain profile. 534 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00162 904 MobiDBLite consensus disorder prediction 56 76 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00688 Bpe12g00162 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00162 Bpe-Chr12:1210384 Bpe14g00766 Bpe-Chr14:5852678 0 dispersed
Bpe12g00162 Bpe-Chr12:1210384 Bpe07g00688 Bpe-Chr7:13517015 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63617 PF00069 Pkinase 1.20E-57 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00162 K20715 - jre:108997379 1018.45