Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00194 ATGCCGAAGAACAAGGGAAAGGGTGGAAAGAATAGGAAAAGAGGAAAGAATGAGGCCGATGATGAGAAACGTGAGCTTGTCTTCAAGGAAGATGGGCAGGAGTACGCCCAAGTCCTTAGAATGCTAGGCAATGGCCGGTGCGAGGCTATGTGCATCGACGGGACAAAACGGCTTTGCCATATCAGAGGAAAGATGCATAAGAAGGTTTGGATAGCAGCTGGAGATATCATACTTGTCGGTCTTAGAGATTATCAGGATGACAAGGCCGATGTGATTCTCAAATACATGCCTGATGAGGCAAGACTTCTGAAGGCATATGGTGAGCTACCTGACAGTACACGTCTTAATGAGGGGATTGCCGGAGGCATTGATGACGAAGAAGATGGAGCTGGTGATGACTACATTGAGTTTGAGGATGAAGACATCGATAAGATCTAG 438 46.8 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDSTRLNEGIAGGIDDEEDGAGDDYIEFEDEDIDKI 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1529135 1529572 - Bpe005434.1 Bpe12g00194 112207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00194 145 MobiDBLite consensus disorder prediction 1 25 - -
Bpe12g00194 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 145 - -
Bpe12g00194 145 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Bpe12g00194 145 Gene3D - 2 145 IPR012340 -
Bpe12g00194 145 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bpe12g00194 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Bpe12g00194 145 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Bpe12g00194 145 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Bpe12g00194 145 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Bpe12g00194 145 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bpe12g00194 145 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Bpe12g00194 145 SUPERFAMILY Nucleic acid-binding proteins 2 143 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00194 Bpe-Chr12:1529135 Bpe14g00727 Bpe-Chr14:5626177 4.08E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00194 K03236 - gmx:100777129 238.424