Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00198 ATGGCTCAGTTACCTCCTAAAGTCCCAACCATGGCGTCCAATTGGTCGGAATTTTCCCACCAGAAAATACCCACAATGGTGGCCGGAGGAGGCTTTACGCCAAATGCAGCAGCTCATCACCCTTCGTGGGTGGATGAGTTCCTAGACTTCTCTTCGTCCAGACGCGGATCCCACCGCCGGTCTGTCAGCGATTCCATCGCATTTATGGAGATGCCCATGCTAGACGAATGCCGTGGCTCGGCGGCGAATCACGATGTCGTGGCCAACAACGAGTTCGATAGATTTGATGACGAGCAATTCATGTCCATGTTTACTGACGAAATCTCATCAGCTGTGGCCCCCACTGTGTCCTCCTCGAATCCTTCTACGCCGTCCGATCACAACAGCGTCGACGAGGAGAAAGAAGCCTTGCATACCAACGACCAGAAGCAGAAGAAAAATGAATCGGAAGAGGTCCAAAGCCAATGCAAGTCCGAAAACCAAGCCCCAAACAGTGCAGTCGCCAGCGCCGCCGCCGATAGGATAACCGATCCCAAAAGGGTCAAAAGAATCTTGGCGAACAGACAGTCTGCGCAAAGATCAAGAGTCAGGAAACTGCAGTACATATCAGAGTTGGAACGTAGCGTCACTTCACTGCAAGCTGAAGTTTCAGTTTTATCGCCGCGGGTGGCGTTTCTCGACCACCAAAGATTGCTTCTAAACGTAGATAACAGTGCTCTTAAGCAACGGATCGCCGCCCTCGCCCAGGATAAGATTTTTAAAGATGCTCATCAAGAAGCATTGAAGAGAGAAATTGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATGGAGAATACTGAGCATTCACCGCCTTCTTGTGATTCACAGTCTGCAGCTGATAGAAAAGAAAACCTTCTTAACGCTTGA 918 49.67 MAQLPPKVPTMASNWSEFSHQKIPTMVAGGGFTPNAAAHHPSWVDEFLDFSSSRRGSHRRSVSDSIAFMEMPMLDECRGSAANHDVVANNEFDRFDDEQFMSMFTDEISSAVAPTVSSSNPSTPSDHNSVDEEKEALHTNDQKQKKNESEEVQSQCKSENQAPNSAVASAAADRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMENTEHSPPSCDSQSAADRKENLLNA 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1566751 1568355 + Bpe005438.1 Bpe12g00198 112211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00198 305 Coils Coil 258 278 - -
Bpe12g00198 305 MobiDBLite consensus disorder prediction 112 172 - -
Bpe12g00198 305 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Bpe12g00198 305 MobiDBLite consensus disorder prediction 112 126 - -
Bpe12g00198 305 PANTHER BASIC LEUCINE ZIPPER 34 1 297 - -
Bpe12g00198 305 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Bpe12g00198 305 MobiDBLite consensus disorder prediction 127 153 - -
Bpe12g00198 305 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Bpe12g00198 305 MobiDBLite consensus disorder prediction 276 305 - -
Bpe12g00198 305 Pfam Basic region leucine zipper 176 224 IPR004827 GO:0003700|GO:0006355
Bpe12g00198 305 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Bpe12g00198 305 Gene3D - 178 281 - -
Bpe12g00198 305 MobiDBLite consensus disorder prediction 281 305 - -
Bpe12g00198 305 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
Bpe12g00198 305 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01832 Bpe-Chr11:14720294 Bpe12g00198 Bpe-Chr12:1566751 3.40E-24 dispersed
Bpe12g00198 Bpe-Chr12:1566751 Bpe15g00837 Bpe-Chr15:18417720 4.37E-21 dispersed
Bpe15g01208 Bpe-Chr15:20772082 Bpe12g00198 Bpe-Chr12:1566751 1.11E-18 dispersed
Bpe01g00078 Bpe-Chr1:498671 Bpe12g00198 Bpe-Chr12:1566751 4.18E-07 transposed
Bpe11g00454 Bpe-Chr11:3531443 Bpe12g00198 Bpe-Chr12:1566751 2.18E-116 transposed
Bpe12g00198 Bpe-Chr12:1566751 Bpe15g00728 Bpe-Chr15:17799736 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22174 PF07716 bZIP_2 3.50E-09 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00198 - - qsu:112040072 409.068