Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00210 | ATGAACTTCCCTCCCCCGTCGTCCCACGATAAACGGATGATCGTGGACGAGATGAACTTCTTCGCTGATGACAAACACCCTGATTCCTCCTTTGACACCGACGATAATAAATGCTCAGATATCCGGCGCACTGAGTTGGAGGTCAACGTTAACACTGGTTTGCATCTTCTAACCACTAATACCAGTAGCGATCAATCCATGGTGGACGACGGGGTATCTCCTATCGCAGAAGATAAGAGATCTAAAAATGACGTATTGGTTTTGCAGGCTGAGATAGAGAGGGTGAACATGGAGAATCGACGTTTAAGAGATATGCTCAATCAAGTAAGCAGCAATAACCAGGCGTTGCAGATGCACTTGGTCAATTTAATGCAGGATAAAAAAACTGAGGAAATTGATAAACGTAGTGGAAATGGCGGAGCACTGGTTCCGAGGCAATTCATGGATCTTGGTCTGCCTACTAATGCCGATGCCGATGAGCCGTCTCTGTCCTCATCAGAAGCGAATGACTGCCAATCAGGATCACAGAGAAATAACGTCGAATTTGCATCGGAGGGTCCAGCGATTGAGAGAGAGAGAGAGAAGGAGAATAGTCCTGATCCAGTTTCTCAAGAACGGGGAGGAAGCAAGATTTCGAGATTTAATCCTGGTAAAGACGTTGATCAAAGGGAGGCAAACATGAGAAAGGCTCGAGTTTCTGTTAGAGCTCGATCTGAGGAGCCTATGATCACAGATGGGTGTCAATGGAGGAAATACGGGCAGAAAATGGCGAAGGGAAACCCATGTCCTCGAGCTTATTATCGGTGTACAATGGCCGCCGGCTGTCCGGTTCGAAAACAAGTGCAAAGGTGTGCAGAAGATCGGACGATTCTGATAACAACTTACGAAGGAAATCACAACCATCCATTACCGCCGGCGGCGATGGCGATGGCCTCAACGACATCATCTGCGGCGAGAATGCTACTATCGGGATCGACGTCGAGTGCCGATCATAGTCTGATGAACCCAAGTTTTCTGCCAGAAACTCTCCTCCTAGGCTCCTCAAACATGGCTACAATCTCAGCCTCCGCCCCGTTTCCCACTGTTACGCTAGACCTCACTAAAACACCCATCAACCCTTTACAATTCCAAAGGCCACAAAGCCCATTTCAAATCCCTTTTCCTAACCCATCTCCCAATTCCTCAACCTCCTTCCTCCCTCAAATCTTAAGCCAGGTGTTGTACAACCAGTCTAAGTTCTCCGGGCTTCAAATGTCGCAAGAGAGCGGCGGCCAGGTGGGTCAGCAAGGTGGGACGGCTGACACCCTCAGCGCTGCCATTGCTGCAGATCCAAACTTCACGGGAGCGCTAGTCGCAGCAATCACTTCTATTATTGAAGGTGCTCAGTCAGTCAAAAACAGCGACATGAATAACAGTAACAGTAGTAATAAAATCAGCAGTTCGAGTTTCTCAGGAAATTGA | 1461 | 48.12 | MNFPPPSSHDKRMIVDEMNFFADDKHPDSSFDTDDNKCSDIRRTELEVNVNTGLHLLTTNTSSDQSMVDDGVSPIAEDKRSKNDVLVLQAEIERVNMENRRLRDMLNQVSSNNQALQMHLVNLMQDKKTEEIDKRSGNGGALVPRQFMDLGLPTNADADEPSLSSSEANDCQSGSQRNNVEFASEGPAIEREREKENSPDPVSQERGGSKISRFNPGKDVDQREANMRKARVSVRARSEEPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSTSSADHSLMNPSFLPETLLLGSSNMATISASAPFPTVTLDLTKTPINPLQFQRPQSPFQIPFPNPSPNSSTSFLPQILSQVLYNQSKFSGLQMSQESGGQVGQQGGTADTLSAAIAADPNFTGALVAAITSIIEGAQSVKNSDMNNSNSSNKISSSSFSGN | 486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1671575 | 1673394 | + | Bpe005451.1 | Bpe12g00210 | 112223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00210 | 486 | Gene3D | WRKY domain | 228 | 305 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00210 | 486 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 8 | 476 | IPR044810 | GO:0003700 | |
Bpe12g00210 | 486 | MobiDBLite | consensus disorder prediction | 465 | 486 | - | - | |
Bpe12g00210 | 486 | ProSiteProfiles | WRKY domain profile. | 238 | 304 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00210 | 486 | Pfam | WRKY DNA -binding domain | 245 | 302 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00210 | 486 | MobiDBLite | consensus disorder prediction | 186 | 201 | - | - | |
Bpe12g00210 | 486 | MobiDBLite | consensus disorder prediction | 151 | 237 | - | - | |
Bpe12g00210 | 486 | MobiDBLite | consensus disorder prediction | 216 | 237 | - | - | |
Bpe12g00210 | 486 | PANTHER | OS05G0567200 PROTEIN | 8 | 476 | - | - | |
Bpe12g00210 | 486 | SUPERFAMILY | WRKY DNA-binding domain | 237 | 304 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00210 | 486 | Coils | Coil | 85 | 112 | - | - | |
Bpe12g00210 | 486 | MobiDBLite | consensus disorder prediction | 158 | 182 | - | - | |
Bpe12g00210 | 486 | SMART | WRKY_cls | 243 | 303 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe12g00210 | Bpe14g00751 | CCT | |
Bpe12g00210 | Bpe14g00751 | ECH | |
Bpe12g00210 | Bpe15g00723 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe06g00676 | Bpe-Chr6:17397300 | Bpe12g00210 | Bpe-Chr12:1671575 | 5.48E-32 | dispersed | |
Bpe12g00210 | Bpe-Chr12:1671575 | Bpe14g00751 | Bpe-Chr14:5769603 | 2.30E-143 | dispersed | |
Bpe12g00210 | Bpe-Chr12:1671575 | Bpe15g00723 | Bpe-Chr15:17745681 | 0 | wgd | |
Bpe12g00210 | Bpe-Chr12:1671575 | Bpe03g00784 | Bpe-Chr3:27807468 | 1.26E-81 | wgd | |
Bpe12g00210 | Bpe-Chr12:1671575 | Bpe07g00621 | Bpe-Chr7:12935671 | 7.38E-134 | wgd | |
Bpe12g00210 | Bpe-Chr12:1671575 | Bpe09g00165 | Bpe-Chr9:1105689 | 8.73E-87 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22176 | PF03106 | WRKY | 2.40E-24 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00210 | - | - | qsu:112033147 | 508.834 |