Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00210 ATGAACTTCCCTCCCCCGTCGTCCCACGATAAACGGATGATCGTGGACGAGATGAACTTCTTCGCTGATGACAAACACCCTGATTCCTCCTTTGACACCGACGATAATAAATGCTCAGATATCCGGCGCACTGAGTTGGAGGTCAACGTTAACACTGGTTTGCATCTTCTAACCACTAATACCAGTAGCGATCAATCCATGGTGGACGACGGGGTATCTCCTATCGCAGAAGATAAGAGATCTAAAAATGACGTATTGGTTTTGCAGGCTGAGATAGAGAGGGTGAACATGGAGAATCGACGTTTAAGAGATATGCTCAATCAAGTAAGCAGCAATAACCAGGCGTTGCAGATGCACTTGGTCAATTTAATGCAGGATAAAAAAACTGAGGAAATTGATAAACGTAGTGGAAATGGCGGAGCACTGGTTCCGAGGCAATTCATGGATCTTGGTCTGCCTACTAATGCCGATGCCGATGAGCCGTCTCTGTCCTCATCAGAAGCGAATGACTGCCAATCAGGATCACAGAGAAATAACGTCGAATTTGCATCGGAGGGTCCAGCGATTGAGAGAGAGAGAGAGAAGGAGAATAGTCCTGATCCAGTTTCTCAAGAACGGGGAGGAAGCAAGATTTCGAGATTTAATCCTGGTAAAGACGTTGATCAAAGGGAGGCAAACATGAGAAAGGCTCGAGTTTCTGTTAGAGCTCGATCTGAGGAGCCTATGATCACAGATGGGTGTCAATGGAGGAAATACGGGCAGAAAATGGCGAAGGGAAACCCATGTCCTCGAGCTTATTATCGGTGTACAATGGCCGCCGGCTGTCCGGTTCGAAAACAAGTGCAAAGGTGTGCAGAAGATCGGACGATTCTGATAACAACTTACGAAGGAAATCACAACCATCCATTACCGCCGGCGGCGATGGCGATGGCCTCAACGACATCATCTGCGGCGAGAATGCTACTATCGGGATCGACGTCGAGTGCCGATCATAGTCTGATGAACCCAAGTTTTCTGCCAGAAACTCTCCTCCTAGGCTCCTCAAACATGGCTACAATCTCAGCCTCCGCCCCGTTTCCCACTGTTACGCTAGACCTCACTAAAACACCCATCAACCCTTTACAATTCCAAAGGCCACAAAGCCCATTTCAAATCCCTTTTCCTAACCCATCTCCCAATTCCTCAACCTCCTTCCTCCCTCAAATCTTAAGCCAGGTGTTGTACAACCAGTCTAAGTTCTCCGGGCTTCAAATGTCGCAAGAGAGCGGCGGCCAGGTGGGTCAGCAAGGTGGGACGGCTGACACCCTCAGCGCTGCCATTGCTGCAGATCCAAACTTCACGGGAGCGCTAGTCGCAGCAATCACTTCTATTATTGAAGGTGCTCAGTCAGTCAAAAACAGCGACATGAATAACAGTAACAGTAGTAATAAAATCAGCAGTTCGAGTTTCTCAGGAAATTGA 1461 48.12 MNFPPPSSHDKRMIVDEMNFFADDKHPDSSFDTDDNKCSDIRRTELEVNVNTGLHLLTTNTSSDQSMVDDGVSPIAEDKRSKNDVLVLQAEIERVNMENRRLRDMLNQVSSNNQALQMHLVNLMQDKKTEEIDKRSGNGGALVPRQFMDLGLPTNADADEPSLSSSEANDCQSGSQRNNVEFASEGPAIEREREKENSPDPVSQERGGSKISRFNPGKDVDQREANMRKARVSVRARSEEPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSTSSADHSLMNPSFLPETLLLGSSNMATISASAPFPTVTLDLTKTPINPLQFQRPQSPFQIPFPNPSPNSSTSFLPQILSQVLYNQSKFSGLQMSQESGGQVGQQGGTADTLSAAIAADPNFTGALVAAITSIIEGAQSVKNSDMNNSNSSNKISSSSFSGN 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1671575 1673394 + Bpe005451.1 Bpe12g00210 112223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00210 486 Gene3D WRKY domain 228 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe12g00210 486 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 476 IPR044810 GO:0003700
Bpe12g00210 486 MobiDBLite consensus disorder prediction 465 486 - -
Bpe12g00210 486 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe12g00210 486 Pfam WRKY DNA -binding domain 245 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe12g00210 486 MobiDBLite consensus disorder prediction 186 201 - -
Bpe12g00210 486 MobiDBLite consensus disorder prediction 151 237 - -
Bpe12g00210 486 MobiDBLite consensus disorder prediction 216 237 - -
Bpe12g00210 486 PANTHER OS05G0567200 PROTEIN 8 476 - -
Bpe12g00210 486 SUPERFAMILY WRKY DNA-binding domain 237 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe12g00210 486 Coils Coil 85 112 - -
Bpe12g00210 486 MobiDBLite consensus disorder prediction 158 182 - -
Bpe12g00210 486 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00210 Bpe14g00751 CCT
Bpe12g00210 Bpe14g00751 ECH
Bpe12g00210 Bpe15g00723 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00676 Bpe-Chr6:17397300 Bpe12g00210 Bpe-Chr12:1671575 5.48E-32 dispersed
Bpe12g00210 Bpe-Chr12:1671575 Bpe14g00751 Bpe-Chr14:5769603 2.30E-143 dispersed
Bpe12g00210 Bpe-Chr12:1671575 Bpe15g00723 Bpe-Chr15:17745681 0 wgd
Bpe12g00210 Bpe-Chr12:1671575 Bpe03g00784 Bpe-Chr3:27807468 1.26E-81 wgd
Bpe12g00210 Bpe-Chr12:1671575 Bpe07g00621 Bpe-Chr7:12935671 7.38E-134 wgd
Bpe12g00210 Bpe-Chr12:1671575 Bpe09g00165 Bpe-Chr9:1105689 8.73E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22176 PF03106 WRKY 2.40E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00210 - - qsu:112033147 508.834