Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00216 ATGGTGGGTGACAGCGGAGGAGGAGGAGGAAGAAAAAACGAGGGAAGAGGAGGGGGTGAGGAAATGAAAGGGCTGAAGAAGGGGCCGTGGACGGCAGCGGAGGATACGATTTTGATGGAGTACGTGAAGAAACACGGGGAAGGAAACTGGAATGCAGTGCAAAAAAACACAGGGTTGGCTAGATGTGGGAAGAGTTGCAGGCTGAGATGGGCTAACCATTTGCGCCCTAATCTCAAGAAGGGTTCTTTCTCTGCCGATGAAGAGAGCGTCATCATCGAACTTCACGCTAAGCTCGGCAACAAATGGGCTCGCATGGCTGCTCAGCTGCCGGGTAGAACTGACAATGAAATAAAGAACTACTGGAATACGAGGATGAAGAGACGACACAGAGCTGGCTTGCCTCTTTACCCGCTCGAACTTCAAAAAGAAGTTGCTCCAATTCATCTCCAACACCACAGCGAAACCTATTATTCTTCTCCTCCCTTCTCTTCTCTTCTCTCTCCTCCTCAACCTCCAAAATTTAATTTCGATCGCTCCCTCTCTCTCTTCAACCCCATGAGTTTCTCGTTAGCTGTGAATTCTCTGTCGTCAAACCAGCACGATTCTGCTTTTTTCTCCGCACCCACCTCCCAATTTCAGCTTCTCAGTGAGAACAATGGCGCTTCTGGTTTTTCTGTTCCAATATCTTCTGCATTTGTGCCTGTTTCCTCCGTTTTTACTCAGAGACTCCAGACGCGTCCACTTTCTCCGCAGGCATTGAATTTGAATTACGGAAGAAGTAACTTTAACTGTAATTCTGGTTTCAGCTCCATGATCCTTGGTTCTTCGTTTGAACAAGTGATTCCTGGATTAGAAGCAGAGCTACCTTCAATCCAAACGCCGCCGCTTTCAACGACAACAGCCTCATCGGGAGCCAGCGTCGGTGACTGCGAAATGAACACACAAATATCGCAGGCAAATAGCGGGTTGCTTGATGCTCTATTAATAGAGGCTCAAGCTATGGCTCGAAATGAGAGAGTAAAAGACTACGGGTCTTCCTCAGCCGTGTCAGAAAAAGGAAAACACGTTGGAGAAGAAGACGCCGTCGAAAACCACTCCGATGAATTGAGCTCTTCTCAATCATCAACCGCGGTGAAAACGATGGAGGGTCAAATGGAAGAGACGGAATCGGTGGACGAAGACTTGATGAGTCTTCTCAACAACTTTCCCTCCACAATGCCACAGCCATTACCGGAATGGTACCCGAGTATCCGTGGCAACGCAGACAACGCCCAGGGGTCTTATCTTCCGGCCGCAAGTCTGACGCTCGATATGCGGCAAAATGCTGATTCACCAGCACCAATCGCATCTCCGACGGCTCGCTGGAACAACTGGCCCCGCAACACCCAATAG 1392 49.28 MVGDSGGGGGRKNEGRGGGEEMKGLKKGPWTAAEDTILMEYVKKHGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKGSFSADEESVIIELHAKLGNKWARMAAQLPGRTDNEIKNYWNTRMKRRHRAGLPLYPLELQKEVAPIHLQHHSETYYSSPPFSSLLSPPQPPKFNFDRSLSLFNPMSFSLAVNSLSSNQHDSAFFSAPTSQFQLLSENNGASGFSVPISSAFVPVSSVFTQRLQTRPLSPQALNLNYGRSNFNCNSGFSSMILGSSFEQVIPGLEAELPSIQTPPLSTTTASSGASVGDCEMNTQISQANSGLLDALLIEAQAMARNERVKDYGSSSAVSEKGKHVGEEDAVENHSDELSSSQSSTAVKTMEGQMEETESVDEDLMSLLNNFPSTMPQPLPEWYPSIRGNADNAQGSYLPAASLTLDMRQNADSPAPIASPTARWNNWPRNTQ 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1786844 1788500 + Bpe005458.1 Bpe12g00216 112229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00216 463 SMART sant 79 127 IPR001005 -
Bpe12g00216 463 SMART sant 26 76 IPR001005 -
Bpe12g00216 463 Gene3D - 82 128 - -
Bpe12g00216 463 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Bpe12g00216 463 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Bpe12g00216 463 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Bpe12g00216 463 MobiDBLite consensus disorder prediction 440 463 - -
Bpe12g00216 463 MobiDBLite consensus disorder prediction 352 366 - -
Bpe12g00216 463 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Bpe12g00216 463 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Bpe12g00216 463 Gene3D - 26 79 - -
Bpe12g00216 463 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 16 441 - -
Bpe12g00216 463 MobiDBLite consensus disorder prediction 1 27 - -
Bpe12g00216 463 MobiDBLite consensus disorder prediction 342 391 - -
Bpe12g00216 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Bpe12g00216 463 MobiDBLite consensus disorder prediction 367 383 - -
Bpe12g00216 463 CDD SANT 82 123 IPR001005 -
Bpe12g00216 463 CDD SANT 29 74 IPR001005 -
Bpe12g00216 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00216 Bpe14g00626 CCT
Bpe12g00216 Bpe14g00626 ECH
Bpe12g00216 Bpe15g00176 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01629 Bpe-Chr4:22531010 Bpe12g00216 Bpe-Chr12:1786844 1.01E-64 dispersed
Bpe12g00216 Bpe-Chr12:1786844 Bpe15g01383 Bpe-Chr15:21770561 8.47E-69 dispersed
Bpe13g00784 Bpe-Chr13:14273859 Bpe12g00216 Bpe-Chr12:1786844 2.45E-40 dispersed
Bpe12g00216 Bpe-Chr12:1786844 Bpe15g00718 Bpe-Chr15:17706638 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22177 PF00249 Myb_DNA-binding 4.00E-14 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00216 K09422 - csv:101204619 409.453