Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00225 ATGCCAGCTGGGTTCATGATACCGCCGAGGAATACGCCGCCCATGATTGGAAGGAATGGCAATGGAAATGGATTTGGATCGTCTTCGTCCGTTAACCTTGGCCAGCTTAACATGTTGGAGGGACAGCTCCACACGCTGGACATGACTAATAACAACACTTCAGAGAGTAATCTTGTCCGACTTCGAGATGACGATTTCGACAACGCCACCAAATCAAGTAGCGAAAACCACGAAGTTTTCTCCGGCGGCGACCAAGACCCACAACCTAAAAAGAAGCGATACCATCGCCACACCCAGTTTCATATCCAACAAATGGAAGCTTTCTTCAACAAGTGCCCGCATCCAGACGACAAGCAGAGAAAGGAGTTGAGCAGGGAATTAAATCTGGAGCCATTGCAGATCAAATTCTGGTTTCAAAACAAACGCACTCAAATGAAGACCCAACACGAGCGCCATGACAACACACTTCTCCGGACCGAAAACGACAAGCTTCGAGCAGATAACATGCGGTATCGAGAAGCTCTGAGCAATGCTTCCTGTCCTTACTGTGGAGGCTCAACCGCCATTGGAGAGATGTCCTTCGACGAACATCATCTCAGACTCGAAAATGCCAGATTACGGGAAGAGATCGATCGAATGTCAGCAATAGCCGCTAAGTATGTTGGCAAACCGGTGATGAACTTCCCACTTTCATCTCCCCCTGTTCCATCTCGCCCGCTTGAACTAGACATTGGAAACTTTGAAGGGCAGACGGTGATCGGCAGCGAGATGTATGTGTACGGAGACATGATTCGGTCTTCCGGTGCTCCAACGGAGGAAGAGAAACCCATGATAATGGAGCTTGCCGTGGAGGCTATGGAGGAATTGATCAGAATGGCTCAGGTGGGAGAGCCATTATGGATTTCTAGACTTGACGGTTCATCCAATGTGTTCAATGAAGAGGAATACATTAGAACATTCAGCGGAGGTATTGGACCAAAACCTTCTGGATTCAAAACTGAAGCCTCTAGAGAATCGGATCTTGTTATTATGAACCATATCAACTTGGTTCAGATACTTATGGACGTGAATCAATGGTCAACTGTGTTTTCTGGGATCGTGTCGAGAGCTGCAACGCTTGAGGTTTTGTTAACTGGAGTAGCAGGAAACAACATCGGAGCACTACAAGTGATGACATCAGAATATCAACTCCCATCACCACTTGTTCCAACGCGTGAGAATTATTACGCAAGGTATTGTAAACTGCTCGGAGATGGGATTTGGGTAGTGGTGGATGTTTCTCTGGACCATTTACGACCAACCCCTCTGATGAGATCCAGAAGAAGGCCTTCTGGCTGTTTAATTCAAGAAATGCCAAATGGGTATTCAAAGGTTACATGGGTTGAACACGTCGAGGTTGATGATAGAGGAGTTCACAGTCTATACAAACAACTTGTTAACTCTGGTCAAGCTTTCGGAGCAAAACGTTGGCTTGCAACCTTGAATCGACAGTGCGAAAGACTTACTAGCGCAGTGGGGAGGGGCATCCAAAACGATGATGCTGGCGTGTTAACGAATCAAGAAGGGAGGAAGAGCATGCTAAAGCTGGCTGAGAGGATGGTGATAAGTTTCTGTGCCGGAGTGAGCGCCTCGACTGCTCATTCGTGGACAACGTTATCAGGGACGGGGCAGGATGATGTTAGGGTTATGACTCGAAAGAGCGTCGATGATCCTGGTAGACCTCCGGGCATTGTGCTGAGTGCAGCTACTTCTTTCTGGCTTCCAGTTCCTCCAAAAAGGGTCTTCGACTTTCTCGGTGACAAGAACTCAAGAACTGAGTGGGACATTCTTTCAAACGGTGGAGTTGTTCAAGAGGTGGCACATATCGATAACGGACCCGATACCGGCAATTGCGTGTCTTTGCTTCGAGTGAATAGCCCAAATTCAAGCCACAGCAACATGCTGATATTACAAGAAAGTTCAACAGACCCAACAGCCTCTTTTGTGATATATGGTCCTGTTGATATAGTTGCCATGAACGGAGTACTGAACGGTGGAGACCCAGATTATGTGGCCCTTCTTCCTTCAGGATTTGCTATTCTTCCTGATGGAACAGGATCAGACGGTGGAAATTTGTGTGAAGGTGGGCCAGGTGGGTCCCTCTTGAGCGTTGCGTTCCAGATTTTGGTTGATTCTGTCCCGACTGCGAAACTCTCTCTTGGGTCAGTTGCCACTGTCAACAATCTCATTGCTTGCACAGTTGAGAGGATCAAGGCTTCTTTGTCAAGCGGCTATGTTTGA 2280 47.54 MPAGFMIPPRNTPPMIGRNGNGNGFGSSSSVNLGQLNMLEGQLHTLDMTNNNTSESNLVRLRDDDFDNATKSSSENHEVFSGGDQDPQPKKKRYHRHTQFHIQQMEAFFNKCPHPDDKQRKELSRELNLEPLQIKFWFQNKRTQMKTQHERHDNTLLRTENDKLRADNMRYREALSNASCPYCGGSTAIGEMSFDEHHLRLENARLREEIDRMSAIAAKYVGKPVMNFPLSSPPVPSRPLELDIGNFEGQTVIGSEMYVYGDMIRSSGAPTEEEKPMIMELAVEAMEELIRMAQVGEPLWISRLDGSSNVFNEEEYIRTFSGGIGPKPSGFKTEASRESDLVIMNHINLVQILMDVNQWSTVFSGIVSRAATLEVLLTGVAGNNIGALQVMTSEYQLPSPLVPTRENYYARYCKLLGDGIWVVVDVSLDHLRPTPLMRSRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVNSGQAFGAKRWLATLNRQCERLTSAVGRGIQNDDAGVLTNQEGRKSMLKLAERMVISFCAGVSASTAHSWTTLSGTGQDDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLGDKNSRTEWDILSNGGVVQEVAHIDNGPDTGNCVSLLRVNSPNSSHSNMLILQESSTDPTASFVIYGPVDIVAMNGVLNGGDPDYVALLPSGFAILPDGTGSDGGNLCEGGPGGSLLSVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSSGYV 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1885649 1889993 + Bpe005467.1 Bpe12g00225 112238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00225 759 Pfam Homeodomain 91 146 IPR001356 GO:0003677
Bpe12g00225 759 CDD homeodomain 91 149 IPR001356 GO:0003677
Bpe12g00225 759 CDD START_ArGLABRA2_like 275 499 - -
Bpe12g00225 759 Pfam START domain 280 500 IPR002913 GO:0008289
Bpe12g00225 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 756 IPR042160 -
Bpe12g00225 759 SUPERFAMILY Homeodomain-like 83 152 IPR009057 -
Bpe12g00225 759 Gene3D - 80 162 - -
Bpe12g00225 759 ProSiteProfiles START domain profile. 271 503 IPR002913 GO:0008289
Bpe12g00225 759 SMART START_1 280 500 IPR002913 GO:0008289
Bpe12g00225 759 SUPERFAMILY Bet v1-like 271 501 - -
Bpe12g00225 759 SUPERFAMILY Bet v1-like 519 751 - -
Bpe12g00225 759 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Bpe12g00225 759 MobiDBLite consensus disorder prediction 66 94 - -
Bpe12g00225 759 SMART HOX_1 89 152 IPR001356 GO:0003677
Bpe12g00225 759 Gene3D - 351 502 IPR023393 -
Bpe12g00225 759 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 47 756 - -
Bpe12g00225 759 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Bpe12g00225 759 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00606 Bpe12g00225 CCT
Bpe12g00225 Bpe14g00705 CCT
Bpe07g00606 Bpe12g00225 ECH
Bpe12g00225 Bpe14g00705 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00225 Bpe-Chr12:1885649 Bpe14g00999 Bpe-Chr14:7375836 0 dispersed
Bpe12g00225 Bpe-Chr12:1885649 Bpe14g00705 Bpe-Chr14:5506370 0 wgd
Bpe12g00225 Bpe-Chr12:1885649 Bpe15g00712 Bpe-Chr15:17670077 0 wgd
Bpe12g00225 Bpe-Chr12:1885649 Bpe07g00606 Bpe-Chr7:12804133 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22179 PF01852 START 3.70E-54 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00225 K09338 - qsu:112026601 1194.87