Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00226 ATGTCTGAGCTCGACACCCAGATTCCATCTACTTTTGATCCTTTTGCTGATGCCAATGCTGAGGATTCAGGAGCTGGTGCAAAAGAGTACGTTCATGTGCGTATACAGCAGCGGAATGGAAGAAAAAGCCTGACAACTGTACAAGGTTTGCAGAAAGAATACAGCTACAACAAGATACTTAAAGACCTCAAGAAGGAATTTTGCTGTAACGGAACTGTCGTTCAGGACCCAGAGCTAGGACCGGTCATACAAATTCAAGGCGATCAAAGAATGAATGTTTCGGTATTTCTAGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATCCATGGTTTTTGA 342 42.98 MSELDTQIPSTFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLQKEYSYNKILKDLKKEFCCNGTVVQDPELGPVIQIQGDQRMNVSVFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1898632 1899328 - Bpe005468.2 Bpe12g00226 112239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00226 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bpe12g00226 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Bpe12g00226 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Bpe12g00226 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
Bpe12g00226 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Bpe12g00226 113 Gene3D - 1 113 - -
Bpe12g00226 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Bpe12g00226 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Bpe12g00226 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01137 Bpe-Chr8:13247120 Bpe12g00226 Bpe-Chr12:1898632 4.97E-66 dispersed
Bpe11g00551 Bpe-Chr11:4222231 Bpe12g00226 Bpe-Chr12:1898632 6.67E-59 dispersed
Bpe12g00226 Bpe-Chr12:1898632 Bpe03g00803 Bpe-Chr3:27968641 4.75E-66 wgd
Bpe12g00226 Bpe-Chr12:1898632 Bpe09g00189 Bpe-Chr9:1319288 2.50E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00226 K03113 - cpap:110810970 215.698