Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00228 ATGGATTCCATTCGTTTTCCCTCCATAATAGTCATGCTGTTTTTAGTATTTGCAGGCTCGACTGAAGCTCAATTACAGCTTGGTTACTACTCAAAGAGCTGCCCAAACGCCGAGAAAATAGTGCTTGATTTCGTCAAACAGCATATCCACAACGCTCCATCTCTGGCTGCTGCTCTTATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGACGCGTCTGTGCTCTTAAACTCGACGTCTGGTAACCAATCGGAAATGGAGGCTGTTCCGAATGAGACAGTGAGAGGGTTCGACTTCATTGACAGAATTAAGACCCTTTTAGAAGCTGAATGTCCTGGAGTTGTTTCTTGCGCAGACATCATCACTTTGGCTGCCAGAGACTCCATTGTAGCGACTGGAGGTCCTTACTGGAAGGTTCCAACTGGTAGAAGAGATGGAGTAGTTTCAATATCTTCAGAAGCAAATGCTAATATCCCAGCTCCATCTGCAAACTCGACAACTCTCCAGACGCTCTTTGCCAACCAGGGTCTTGATCTCAAAGACCTGGTCTTGCTTTCGGGAGCTCACACAATTGGTGTAGCTCATTGTTCAGAAATAACGAACCGACTATACAATTTCACGGGAGTCGGAGACGAAGATCCGTCTCTCGACAGTGAATATGCTGCAAATCTCAAGGCTAGGAAATGCAAAAGCATTAGTGATAATACAACAAAGATTGAAATGGATCCTGGAAGTGCCAGGACGTTTGACATGAGCTACTTCTCTCTTCTTCTCAAAAGAAGGGGTCTTTTTCAATCTGACGCTGCTTTAATTACAGACTCAACTACAAAATCCTATATAACTCAGCTTCTTCAAGGCTCACTTGATAATTTCTTCAACGAATTTGCTGTCTCGATCGAGAAGATGGGTCGGATCAATGTGAAGACTGGATCGGATGGTGAGATCAGGAAGAAGTGTGGAGTGGTGAATAGTTGA 981 44.24 MDSIRFPSIIVMLFLVFAGSTEAQLQLGYYSKSCPNAEKIVLDFVKQHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTSGNQSEMEAVPNETVRGFDFIDRIKTLLEAECPGVVSCADIITLAARDSIVATGGPYWKVPTGRRDGVVSISSEANANIPAPSANSTTLQTLFANQGLDLKDLVLLSGAHTIGVAHCSEITNRLYNFTGVGDEDPSLDSEYAANLKARKCKSISDNTTKIEMDPGSARTFDMSYFSLLLKRRGLFQSDAALITDSTTKSYITQLLQGSLDNFFNEFAVSIEKMGRINVKTGSDGEIRKKCGVVNS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1908532 1909871 + Bpe005470.1 Bpe12g00228 112241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00228 326 Gene3D - 28 325 - -
Bpe12g00228 326 PANTHER PEROXIDASE 6 325 - -
Bpe12g00228 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Bpe12g00228 326 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PANTHER PEROXIDASE 25-RELATED 6 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 Gene3D Peroxidase, domain 2 161 304 - -
Bpe12g00228 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Bpe12g00228 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00228 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00599 Bpe12g00228 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00159 Bpe-Chr5:4657332 Bpe12g00228 Bpe-Chr12:1908532 9.15E-14 dispersed
Bpe12g00228 Bpe-Chr12:1908532 Bpe04g01454 Bpe-Chr4:21173536 6.00E-85 dispersed
Bpe14g00206 Bpe-Chr14:2315096 Bpe12g00228 Bpe-Chr12:1908532 8.81E-73 dispersed
Bpe15g00911 Bpe-Chr15:18927092 Bpe12g00228 Bpe-Chr12:1908532 1.58E-67 dispersed
Bpe04g01179 Bpe-Chr4:13438196 Bpe12g00228 Bpe-Chr12:1908532 5.57E-109 transposed
Bpe06g00601 Bpe-Chr6:16860577 Bpe12g00228 Bpe-Chr12:1908532 2.20E-58 transposed
Bpe08g01268 Bpe-Chr8:14127789 Bpe12g00228 Bpe-Chr12:1908532 6.70E-79 transposed
Bpe15g00094 Bpe-Chr15:9143570 Bpe12g00228 Bpe-Chr12:1908532 1.56E-78 transposed
Bpe12g00228 Bpe-Chr12:1908532 Bpe15g00710 Bpe-Chr15:17643222 2.34E-102 wgd
Bpe12g00228 Bpe-Chr12:1908532 Bpe07g00599 Bpe-Chr7:12674088 2.83E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00228 K00430 - jre:109020700 504.982