Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00241 ATGGGGATCTGTGTCTCGACTGGCAGCCGAGCTAGCCAAAACGGCAGAATCCGGGGGAAGAAGGTTTCTCAATCTTGCCTCGAGAAGAGTTTTGGTGGACAGAGAAGATCAAAGACGACATTTTCCAATGATGTAATCGGTCTGAAACAACTCTCCTCGATCCCAAACAGGATTTGCATAAATGGAAAGAGTCGAACGTCTTGCCTGTTCACTCAAAGAGGTCGCAAGGGGATCAACCAGGACACCATGATCGTATGGGAAGATTTCATTTCAGAGGGTGTAACTTTCTGTGGAGTGTTCGATGGTCATGGACCATATGGCCATCTCGTAGCTGGAAAAGTGATGGATTCATTCCCATTAAAGCTACTATCATTCTTGCATAATTCTCTGTCCAAGAAAGACGACGAAACTGAATTTGACTCTGCTGTGGATGATTCGAATTCCATATGGAGAGAAGCTTTCTTGAAATCCTACAAGGCTATGGATAAGGAACTGAGATCTCATTCCAATTTAGACTGCTTTTGCAGTGGTAGCACTGCAGTTACTATAGTGAAACAAGGGTCCAATCTCTTCATAGGGAGTGTAGGAGATTCTCGAGCAATCCTTGGTTCCAAGAACGACCGGGATTCCATGATGGCGATCCCGTTAACTGTCGATCTAAAACCTGATTTGCCGAGTGAAGCTGAGAGGATAAAAAGGTGTAGAGGAAGGGTGTTTGCAATGCGAGATGAGCCTCTGGTTCCAAGAGTATGGCTGCCGTTTGATGATGCTCCAGGGCTAGCAATGGCTCGAGCTTTTGGCGATTTCTGTTTGAAGAACTATGGAGTTATCTCCATTCCTGAGTTTTCCCACAGGAAACTTACTGATAGAGATCAATTTGTTGTTGTAGCCTCTGATGGGATTTGGGATGTGTTGAGCAATGAAGAGGTAGTTGAGATAGTGTCTTCGGCCTCCACCCGATCATCAGCTGCTAGAATATTGGTCGAGTCTGCAACTCGTGAGTGGAGGCTCAAATACCCGACGTCAAATATGGATGATTGTGCAGTGGTTTGCTTGTTTTTGGACGGCAAAATGGACCCTGAATCACATTGTGATGAACTTGGTTATTCTTCTGCAACCAATCAAAGTAATAATTCTAGTAATGCCATGGAATCCGAGGATGGCCAGAAGTCTGACCCATGTTTACAAAGAAACCACACAGTCAGGTTTGCCAAAGAGAAGAATGAAGAAGTATCGGCTGAAGATCCGAACTGGTCTGGTTTGGAGGGCGTTACACGAGTAAACTCACTCGTACAACTTCCGAGATTTTTTGAGGAAAAATGTTAA 1326 44.72 MGICVSTGSRASQNGRIRGKKVSQSCLEKSFGGQRRSKTTFSNDVIGLKQLSSIPNRICINGKSRTSCLFTQRGRKGINQDTMIVWEDFISEGVTFCGVFDGHGPYGHLVAGKVMDSFPLKLLSFLHNSLSKKDDETEFDSAVDDSNSIWREAFLKSYKAMDKELRSHSNLDCFCSGSTAVTIVKQGSNLFIGSVGDSRAILGSKNDRDSMMAIPLTVDLKPDLPSEAERIKRCRGRVFAMRDEPLVPRVWLPFDDAPGLAMARAFGDFCLKNYGVISIPEFSHRKLTDRDQFVVVASDGIWDVLSNEEVVEIVSSASTRSSAARILVESATREWRLKYPTSNMDDCAVVCLFLDGKMDPESHCDELGYSSATNQSNNSSNAMESEDGQKSDPCLQRNHTVRFAKEKNEEVSAEDPNWSGLEGVTRVNSLVQLPRFFEEKC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2155219 2156841 - Bpe005485.1 Bpe12g00241 112254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00241 441 Pfam Protein phosphatase 2C 96 329 IPR001932 -
Bpe12g00241 441 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 414 - -
Bpe12g00241 441 ProSiteProfiles PPM-type phosphatase domain profile. 66 354 IPR001932 -
Bpe12g00241 441 Gene3D - 57 356 IPR036457 -
Bpe12g00241 441 CDD PP2Cc 65 354 IPR001932 -
Bpe12g00241 441 MobiDBLite consensus disorder prediction 367 387 - -
Bpe12g00241 441 PANTHER ALPHABET, ISOFORM E-RELATED 1 414 - -
Bpe12g00241 441 SMART PP2C_4 55 352 IPR001932 -
Bpe12g00241 441 MobiDBLite consensus disorder prediction 367 395 - -
Bpe12g00241 441 SUPERFAMILY PP2C-like 62 356 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00241 Bpe14g00665 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00241 Bpe-Chr12:2155219 Bpe14g00665 Bpe-Chr14:5324064 0 wgd
Bpe12g00241 Bpe-Chr12:2155219 Bpe07g00561 Bpe-Chr7:12157814 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00241 - - rcu:8262108 646.736