Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00255 ATGGCAGATGGACCACTGTATCCATCAATTTATCAAAAGATATCTGGGAAGTCCTACCTGATTGGTAGAATCTCTCCCAACTTCCAGACTAGGGATTATTCTTCAACTGGTGCATATCTCAATGGAAGTCTGCAGAGTCCTCTTCGTCCAGCCTTCCAAGGCTCTGGTTTGGCTGTTGCCTCATCAATTTCTTCCATTTATGTACAAGCTCCGGCAGAGAAAGGTTTACAAGGCTTTCTTATTGATTTTCTAATGGGAGGGGTGTCTGCTGCCGTTTCCAAATCAGCTGCTGCTCCCATAGAGCGAGTTAAATTGCTTATTCAAAATCAAGATGAGATGATCAAAGCTGGTCGCTTATCTGAGCCTTATAAGGGAATTACTGATTGCTTTGCAAGAACTGTTAAGGATGAAGGCGTCTTAGCTCTTTGGAGAGGGAACAGCACTAATGTCATCAGATATTTCCCAACACAGGCCTTGAATTTTGCTTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAAAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAACTTGGCATCTGGTGGCGCCGCTGGTGCTTCTTCTCTTTTGTTTGTTTATTCCTTGGACTATGCTAGAACACGTCTGGCAAATGATGCCAAGTCTGCTAAAAAGGGTGGCGAAAGACAGTTTAATGGTCTAATTGATGTTTACAAGAAAACACTTAAATCGGATGGCATTGCTGGACTTTATCGTGGCTTTAACATCTCATGCATTGGAATTATTGTGTACCGTGGGCTTTATTTTGGAATGTATGACTCTCTGAAACCGGTTGTTCTGGTTGGTGGACTAGAGGACAGTTTCCTTGCTAGTTTCTTGCTTGGATGGGGTATCACAATAGGTGCAGGATTGGCCTCTTACCCGATCGACACTGTCCGAAGAAGGATGATGATGACCTCCGGAGAAGCTGTAAAGTACAAAAGCTCAATGGACGCATTCAACCAAATCGTCCAGAAAGAAGGTGCTAAGTCCCTCTTCAAAGGTGCCGGAGCAAACATATTGCGTGCTGTTGCTGGTGCTGGTGTGCTAGCTGGCTATGATAAGCTGCAGGTTCTCGTGTTTGGCAAGAAATACGGATCTGGGGGCGGTGGTTAG 1143 44.53 MADGPLYPSIYQKISGKSYLIGRISPNFQTRDYSSTGAYLNGSLQSPLRPAFQGSGLAVASSISSIYVQAPAEKGLQGFLIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGITDCFARTVKDEGVLALWRGNSTNVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLVGGLEDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFNQIVQKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGGG 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2418066 2420473 + Bpe005498.1 Bpe12g00255 112268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00255 380 Pfam Mitochondrial carrier protein 79 174 IPR018108 -
Bpe12g00255 380 Pfam Mitochondrial carrier protein 181 274 IPR018108 -
Bpe12g00255 380 Pfam Mitochondrial carrier protein 283 370 IPR018108 -
Bpe12g00255 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
Bpe12g00255 380 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
Bpe12g00255 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
Bpe12g00255 380 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
Bpe12g00255 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 5 379 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 368 IPR018108 -
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Bpe12g00255 380 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe12g00255 380 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 5 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00545 Bpe-Chr3:25727431 Bpe12g00255 Bpe-Chr12:2418066 0 dispersed
Bpe06g00632 Bpe-Chr6:17099667 Bpe12g00255 Bpe-Chr12:2418066 0 dispersed
Bpe11g00092 Bpe-Chr11:633404 Bpe12g00255 Bpe-Chr12:2418066 1.49E-132 dispersed
Bpe12g00255 Bpe-Chr12:2418066 Bpe13g00317 Bpe-Chr13:11043411 3.27E-129 dispersed
Bpe12g00255 Bpe-Chr12:2418066 Bpe10g00552 Bpe-Chr10:12565248 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00255 K05863 - tcc:18608735 606.29