Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00262 ATGGAAGGCGACGACGAGTACAGAAGGAAAGAGCGAGTCGCATTGGTGGCTATCGTGGTTCTCGCTTCCCTTGCCCTAGCTTCGCTGCTCGTGGCCTTCAGCTATTACTGCTACATTAGCAATAAGGTTTCCAAACGTCTTAGGACCCAGAAAAGTAAGCTGTCATCTGGTGCGAACTCCTACTTTCATCCCCCCTTCATTACTTTTTGGAATAACAATGAAAATAAAGGTGGTTTTGAAAGTTTTAAAGTCGTTGCCGAGGGAGGTCCCCAGGTTTTCACCTTTAAGCAGCTGCACTCAGCAACTGGTGGTTTCAGCAAGTCAAATGTGGTTGGACATGGCGGGTTTGGCTCAGTTTACAGAGGAGTTCTAAACGATGGGAGGAAAGTTGCAATTAAGCTGATGGATCAGCCAGGAAAACAGGGCGAAGATGAATTTAAAGTGGAGGTGGAATTGTTAAGCCGGCTTCATTCTCCATATTTACTTGCACTGCTCGGGTATTGCTCCGATAACAATCATAAACTTCTCGTCTATGAATTCATGGCAAATGGAGGACTTCAGGAGCATCTTTATCCCATTCCCAATTCTAGTGCAGCCTCCTTGAAGTTGGACTGGGAAACACGGTTGAGAATTGCTCTTGAAGCTGCAAAAGGATTGGAGTATCTTCACGAACATGTAAATCCGCCGGTTATTCACAGAGATTTCAAAAGCAGCAACATCCTCTTGGATAGATACTTCCATGCCAAAGTTTCAGATTTTGGACTTGCGAAGATTGGGTCTGACAAAGTTGGAGGACATGTTTCAACACGAGTTTTAGGCACGCAAGGATATGTCGCGCCTGAGTATGCACTAACCGGACATTTGACGACAAAGTCAGATGTGTATAGTTTTGGGGTCGTTCTATTGGAGTTGCTCACAGGAAGAGTTCCTGTTGATATGAAACGGCCAGGTGGAGAAGCTACTCTGGTTTCTTGGGCTTTGCCGAGGTTGACGGACAGAGAGAAAGTGGCGGAAATCATGGATCCCACGTTGGAGGGTCAGTACACAATGAAGGACGTGATTCAGGTGGCAGCCATTGCTGCTATGTGTGTTCAACCAGAGGCAGATTATAGGCCACTGATGGCTGATGTTGTCCATTCGCTTGTTCCACTTGCCAAAAACAACGGAACAACCACGAAGACCAACAATGCTGCGGATTTTATTGCCATGAAGTCTCCTGGCCCTCAGGACGTCGGAAAAGCGAGAGTG 1248 46.63 MEGDDEYRRKERVALVAIVVLASLALASLLVAFSYYCYISNKVSKRLRTQKSKLSSGANSYFHPPFITFWNNNENKGGFESFKVVAEGGPQVFTFKQLHSATGGFSKSNVVGHGGFGSVYRGVLNDGRKVAIKLMDQPGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPIPNSSAASLKLDWETRLRIALEAAKGLEYLHEHVNPPVIHRDFKSSNILLDRYFHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSFGVVLLELLTGRVPVDMKRPGGEATLVSWALPRLTDREKVAEIMDPTLEGQYTMKDVIQVAAIAAMCVQPEADYRPLMADVVHSLVPLAKNNGTTTKTNNAADFIAMKSPGPQDVGKARV 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2483157 2485980 - Bpe024880 Bpe12g00262 112275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00262 416 PANTHER OS07G0227300 PROTEIN 2 413 - -
Bpe12g00262 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Bpe12g00262 416 Gene3D Transferase(Phosphotransferase) domain 1 181 405 - -
Bpe12g00262 416 Pfam Protein tyrosine and serine/threonine kinase 108 381 IPR001245 GO:0004672|GO:0006468
Bpe12g00262 416 Gene3D Phosphorylase Kinase; domain 1 86 180 - -
Bpe12g00262 416 SUPERFAMILY Protein kinase-like (PK-like) 87 381 IPR011009 -
Bpe12g00262 416 CDD STKc_IRAK 111 384 - -
Bpe12g00262 416 ProSiteProfiles Protein kinase domain profile. 105 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00262 416 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Bpe12g00262 416 PANTHER OS01G0750732 PROTEIN 2 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00848 Bpe-Chr4:5586334 Bpe12g00262 Bpe-Chr12:2483157 7.08E-16 dispersed
Bpe05g00243 Bpe-Chr5:14962655 Bpe12g00262 Bpe-Chr12:2483157 2.83E-129 dispersed
Bpe06g00684 Bpe-Chr6:17437770 Bpe12g00262 Bpe-Chr12:2483157 9.57E-86 dispersed
Bpe12g00262 Bpe-Chr12:2483157 Bpe03g00797 Bpe-Chr3:27918991 6.03E-112 dispersed
Bpe12g00262 Bpe-Chr12:2483157 Bpe09g00183 Bpe-Chr9:1270733 7.30E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63621 PF00069 Pkinase 1.10E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00262 - - zju:107434141 614.764