Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00269 GCAAAGCCAAAGGTCCGGACGGGGATGAAGAGCGCAGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGAAAAGACCGACACAGCAAGGTCTACACATCGAAAGGCCCTCGCGACCGTCGTGTCCGGCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCTTAGGCTATGATCGACCCAGCAAAGCGGTCGATTGGCTTATAAAAAAGGCAAAGTCCGCTATTGACAAGCTCACTGAGTTACCGCCTTGCTATGCCACCACCATCGCTGCAGATGCTGACACGAATAATGGTGGTAACGAGATGGTAATTTCTGCAGATCAATCGGAGTCATCAGGATACAATTTGCACCTCCAAAGACATTTGGATGAGAATCCAGATAATAATAATTCGAGTTTCGTTCCTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTCCCCACAAGCTCTGGGTCGTCCCCCATCAATTTCCAGACCTTCCCACCAGATATACTTTCACGAACCGCAAACCCCATTCAAGATCTTGGCCTTTCTCTCCATACTTCACAAGATCCTGGTCTGATTCACTCTCAGGGAGAGCCAAACCACTCGTCACAGACCGATCAAAACCTTTTCTCCGGCTCGCATCAGGTAGGGTATGAACCGAGTTACCAGAGAATGGCAGCTTGGGGAAATGATAGAGGCGCAGAACATGGAGGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTCGGCCAGGGTGGCTCGGCTGCATTATCACAGAGGGGGCCCCTTCAGTCCAGTTACTCACCTTCTGCGTCATTTCGCGGGTGGAACGATCTTTCCATTGCTGCATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGTACTCGTTTCGTTTCAGATGGGCTTCATGGCTTTATCATTCCCGGACAGATTCAGGCCGACGAAGACAGCTGTATGGTTTCCGAACGATTGTCATCTTCTTCTATGGACTCCCACCTTTGA 1044 49.71 AKPKVRTGMKSAVGEIVEVDGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLTELPPCYATTIAADADTNNGGNEMVISADQSESSGYNLHLQRHLDENPDNNNSSFVPPPLSSVALTDSMKTFFPTSSGSSPINFQTFPPDILSRTANPIQDLGLSLHTSQDPGLIHSQGEPNHSSQTDQNLFSGSHQVGYEPSYQRMAAWGNDRGAEHGGGFVFSSLPIFGQGGSAALSQRGPLQSSYSPSASFRGWNDLSIAASKDQKTHSLHQSSLFGTRFVSDGLHGFIIPGQIQADEDSCMVSERLSSSSMDSHL 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2698353 2699396 + Bpe005514.1 Bpe12g00269 112282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00269 347 ProSiteProfiles TCP domain profile. 30 88 IPR017887 -
Bpe12g00269 347 PANTHER TRANSCRIPTION FACTOR TCP4 117 346 - -
Bpe12g00269 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 6 108 IPR005333 GO:0003700
Bpe12g00269 347 MobiDBLite consensus disorder prediction 202 222 - -
Bpe12g00269 347 PANTHER TRANSCRIPTION FACTOR TCP4 6 108 - -
Bpe12g00269 347 Pfam TCP family transcription factor 29 121 IPR017887 -
Bpe12g00269 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 117 346 IPR005333 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01004 Bpe-Chr8:12371932 Bpe12g00269 Bpe-Chr12:2698353 3.71E-79 dispersed
Bpe09g00248 Bpe-Chr9:1833461 Bpe12g00269 Bpe-Chr12:2698353 5.10E-71 dispersed
Bpe11g00456 Bpe-Chr11:3548317 Bpe12g00269 Bpe-Chr12:2698353 3.81E-55 dispersed
Bpe12g00269 Bpe-Chr12:2698353 Bpe13g01326 Bpe-Chr13:18426672 7.95E-23 dispersed
Bpe12g00269 Bpe-Chr12:2698353 Bpe15g00176 Bpe-Chr15:12358051 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22182 PF03634 TCP 5.50E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00269 - - qsu:112040076 392.119