Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00269 | GCAAAGCCAAAGGTCCGGACGGGGATGAAGAGCGCAGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGAAAAGACCGACACAGCAAGGTCTACACATCGAAAGGCCCTCGCGACCGTCGTGTCCGGCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCTTAGGCTATGATCGACCCAGCAAAGCGGTCGATTGGCTTATAAAAAAGGCAAAGTCCGCTATTGACAAGCTCACTGAGTTACCGCCTTGCTATGCCACCACCATCGCTGCAGATGCTGACACGAATAATGGTGGTAACGAGATGGTAATTTCTGCAGATCAATCGGAGTCATCAGGATACAATTTGCACCTCCAAAGACATTTGGATGAGAATCCAGATAATAATAATTCGAGTTTCGTTCCTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTCCCCACAAGCTCTGGGTCGTCCCCCATCAATTTCCAGACCTTCCCACCAGATATACTTTCACGAACCGCAAACCCCATTCAAGATCTTGGCCTTTCTCTCCATACTTCACAAGATCCTGGTCTGATTCACTCTCAGGGAGAGCCAAACCACTCGTCACAGACCGATCAAAACCTTTTCTCCGGCTCGCATCAGGTAGGGTATGAACCGAGTTACCAGAGAATGGCAGCTTGGGGAAATGATAGAGGCGCAGAACATGGAGGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTCGGCCAGGGTGGCTCGGCTGCATTATCACAGAGGGGGCCCCTTCAGTCCAGTTACTCACCTTCTGCGTCATTTCGCGGGTGGAACGATCTTTCCATTGCTGCATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGTACTCGTTTCGTTTCAGATGGGCTTCATGGCTTTATCATTCCCGGACAGATTCAGGCCGACGAAGACAGCTGTATGGTTTCCGAACGATTGTCATCTTCTTCTATGGACTCCCACCTTTGA | 1044 | 49.71 | AKPKVRTGMKSAVGEIVEVDGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLTELPPCYATTIAADADTNNGGNEMVISADQSESSGYNLHLQRHLDENPDNNNSSFVPPPLSSVALTDSMKTFFPTSSGSSPINFQTFPPDILSRTANPIQDLGLSLHTSQDPGLIHSQGEPNHSSQTDQNLFSGSHQVGYEPSYQRMAAWGNDRGAEHGGGFVFSSLPIFGQGGSAALSQRGPLQSSYSPSASFRGWNDLSIAASKDQKTHSLHQSSLFGTRFVSDGLHGFIIPGQIQADEDSCMVSERLSSSSMDSHL | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2698353 | 2699396 | + | Bpe005514.1 | Bpe12g00269 | 112282 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00269 | 347 | ProSiteProfiles | TCP domain profile. | 30 | 88 | IPR017887 | - | |
Bpe12g00269 | 347 | PANTHER | TRANSCRIPTION FACTOR TCP4 | 117 | 346 | - | - | |
Bpe12g00269 | 347 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 6 | 108 | IPR005333 | GO:0003700 | |
Bpe12g00269 | 347 | MobiDBLite | consensus disorder prediction | 202 | 222 | - | - | |
Bpe12g00269 | 347 | PANTHER | TRANSCRIPTION FACTOR TCP4 | 6 | 108 | - | - | |
Bpe12g00269 | 347 | Pfam | TCP family transcription factor | 29 | 121 | IPR017887 | - | |
Bpe12g00269 | 347 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 117 | 346 | IPR005333 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g01004 | Bpe-Chr8:12371932 | Bpe12g00269 | Bpe-Chr12:2698353 | 3.71E-79 | dispersed | |
Bpe09g00248 | Bpe-Chr9:1833461 | Bpe12g00269 | Bpe-Chr12:2698353 | 5.10E-71 | dispersed | |
Bpe11g00456 | Bpe-Chr11:3548317 | Bpe12g00269 | Bpe-Chr12:2698353 | 3.81E-55 | dispersed | |
Bpe12g00269 | Bpe-Chr12:2698353 | Bpe13g01326 | Bpe-Chr13:18426672 | 7.95E-23 | dispersed | |
Bpe12g00269 | Bpe-Chr12:2698353 | Bpe15g00176 | Bpe-Chr15:12358051 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22182 | PF03634 | TCP | 5.50E-32 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00269 | - | - | qsu:112040076 | 392.119 |