Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00274 ATGGATCCCTTATTTCTTATCACCATCTGCGTCTCCCCCGTTCTTTACCTGATTATTCTCCGCCTCTTCTTCTCCGGCGGCCCCAACAAAGCCATCGTTGATAAAACACACAACTGCAAACTCCCTCCCGGTCCAATTTCAATTCCGATCATTAGCGACCTCTCATGGCTGGTCAAGACCTTCAGTGAAATCGAGCCTCTTCTCCGAAATTTTCACGCCAAGTATGGCCCCGTCGTCACGCTGCGCATCGGACCTCGGCCGGCAATTTTCATCTCCGATCGGTCCCTCGCTCACAAAGCCCTCGTTCAAATGGGAGCCATCTTCGCCGATCGTCCCCCTGCTTTTGAGACGGACAGAATAATTAGTGCAAATAATCACAACGTAAACTCCGCTTTCTACGGCTCCACATGGCGTTTACTTCGGCGGAATCTCACTTCGGAGATCCTGCATCCATCTAGAATCAAATCGTACTCCGTTGCGCGCAAGTGGGTCCTCGAAATCCTCCAAAATCGCCTCGTATCTCACTCACCAGAGCGCCCAGTGGTAGGAGATTTCCAGTACGCCATGTTTTGCCTGCTGGTGCTGATTTGCTTCGGCGACAAGCTTGTGGAGGACCAGGTAAAGGAAATTGAAAAGGTTCAACGGGAGTTTCTGTTAAGCATAAGTAGTTTCAACCTGCTTAACTTTTGGCCGGCGATCACCAAGATACTTTTCCCGAAGCGATGGGAGGAATTCTTCCGATTGCTGAAAAACAAAGAGGACGTACACATTCCTTTGATAGAAGCACGAAGGAATTTGAAGAAGGAGAAATTAAGCAGCGAAAAGCAGCTCCAAGAAACAGAAGAAGCTTCAATCTCATACCTCGATACATTATTGAGTATAGAGCTTCCGGAGGAGAAGAGAAAGCTTGAAAACAGAGAGATAGTAAGCCTATGCTCCGAGCTCTTAGATGCAGGTACCGATACTACAACAGCAGCGCTTCAATGGACAATGGCGAATCTGGTGAAATACTCACGAATCCAAGAGAAGCTTTTTCAAGAGATGAGAGGGATTTTAGAATTACCAGAAGAGGAGGTGAAGGAAGAACATCTGGGAAAGCTGCCATATCTGAAAGCTGTGGTCTTGGAAAGCTTGAGAAGACATCCACCGGCCCATTTTGTGCTGCCACACGCAGTTACAGAAGACGTGGTTTTCGATTCTCACTTGATACCCAAAAATGGAAGCGTCAATTTTCTGATCGCAGAAATGGGAAGAGATCCGAAGGTGTGGGAAGCTCCGATGGAGTTTAAGCCGGAGAGGTTCTTGAATGGGAAAGAAGCTTTCGACATAACAGGCAGTAAGGAGATAAAGATGATTCCCTTCGGGGCTGGGAGGAGGATGTGCCCAGGCTATAGCTTGGCGCTGCTTCACCTGGAGTACTTCGTGGCTAATTTAGTTTGGAAGTTTGAGTGGAAAGCCATTGAAGGGGATGAAGTTGATCTGTCTGAAAAGGAAGAGTTCACAGTGGTGATGAAGAATCCATTGAAGGCCGTGGTAACTCCAAGGATGAAGGCGTAG 1557 47.78 MDPLFLITICVSPVLYLIILRLFFSGGPNKAIVDKTHNCKLPPGPISIPIISDLSWLVKTFSEIEPLLRNFHAKYGPVVTLRIGPRPAIFISDRSLAHKALVQMGAIFADRPPAFETDRIISANNHNVNSAFYGSTWRLLRRNLTSEILHPSRIKSYSVARKWVLEILQNRLVSHSPERPVVGDFQYAMFCLLVLICFGDKLVEDQVKEIEKVQREFLLSISSFNLLNFWPAITKILFPKRWEEFFRLLKNKEDVHIPLIEARRNLKKEKLSSEKQLQETEEASISYLDTLLSIELPEEKRKLENREIVSLCSELLDAGTDTTTAALQWTMANLVKYSRIQEKLFQEMRGILELPEEEVKEEHLGKLPYLKAVVLESLRRHPPAHFVLPHAVTEDVVFDSHLIPKNGSVNFLIAEMGRDPKVWEAPMEFKPERFLNGKEAFDITGSKEIKMIPFGAGRRMCPGYSLALLHLEYFVANLVWKFEWKAIEGDEVDLSEKEEFTVVMKNPLKAVVTPRMKA 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2909693 2911249 + Bpe005517.1 Bpe12g00274 112287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00274 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Bpe12g00274 518 Gene3D Cytochrome P450 34 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 SUPERFAMILY Cytochrome P450 42 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 Pfam Cytochrome P450 42 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe12g00274 518 Coils Coil 263 283 - -
Bpe12g00274 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 514 - -
Bpe12g00274 518 PANTHER CYTOCHROME P450 6 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00395 Bpe-Chr3:17948218 Bpe12g00274 Bpe-Chr12:2909693 0 dispersed
Bpe03g00952 Bpe-Chr3:29125168 Bpe12g00274 Bpe-Chr12:2909693 2.19E-152 dispersed
Bpe12g00274 Bpe-Chr12:2909693 Bpe15g01356 Bpe-Chr15:21603004 2.77E-102 dispersed
Bpe12g00274 Bpe-Chr12:2909693 Bpe03g01076 Bpe-Chr3:29957538 5.16E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00274 K24184 - rcu:8283072 653.284