Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00277 ATGACAGATCGCTACTCCTTACACATCAACTGTGGTGGTAAAGAAGCAATAATAGATGGGAAAAAGTATGAAGCTGATATAGAACAAAGAGGGGCTTCAATGTTTTACTCTGGCCAGAACTGGGCATTTAGCAGCACCGGCAACTTCATGGACAATGATGTTGATGTAGATAGCTATATGAGAACCAACACTTCTGCACTAACCAACGTGTCCGCGCCCAATTCACGACTCTACTCAACAGCAAGAACTTCTCCCCTCTCGCTCACTTACTATGGACTCTGCCTTGTGAATGGCAATTACACCGTCAATCTTCACTTTGCGGAGATTATATTCATTAATGGCTCTTCATTTTACAGCCTTGGAAAGAGAATATTTGATGTGTACATTCAGGACAAGCTGGTTCTGAAAGATTTCAATATAGAACTTGAGGCCGGTGGCACTGGTAAACCCATTATAAAAAACTTTACTGCTGCCGTCACGAGTCATACGTTGAAGATCCATTTATACTGGACTGGAAAAGGAACGACGGGAATCCCGTTAAGGGGAAATTATGGGCCCTTGATATCAGCTATATCAGTTGATCCTAATTTCAAACCTCCAACATATGCCAAGAAGAATTATATCAAAGTAATTATTGGGACAACAGGAGCCACATTGTTGCTTTTTATTTTGGTCTTGGGTATGAGGAGGAAGGTTTTGTTTCCCCTGACATTAATAAATGTGATCTCTGCAGAGCTTAAAGGCATGGACCTGCTGACAGGGTTGTTTACTCTAAGACAGATGAAAGCAGCTACTAAAAATTTTGATGCCGAAAACAAACTTGGGGAAGGTGGCTTTGGCACAGTTTACAAAGGTCTTTTATCAGACGGAACTAAAATTGCAGTGAAACAGCTCTCTTCAAAATCGAAGCAAGGAAACCGTGAATTTGTGAATGAAATAGGCATGATATCTGGACTGCAACATCCGAATCTTGTAAAGCTTTACGGGTGTTGTGTTGAAGGAAACCAGCTATTGCTGGTTTACGAGTTTATGGAAAACAATTGTCTATCGCGCACTCTTTTCGGGAAGGACCCAACATGCAGATTGAAACTGGATTGGCCTACCAGAAAGAAAATCTGTGTGGGCATAGCCAGAGGATTAGCCTATCTTCACGAGGAATCGAGACTAAAAATTGTACATCGAGATATCAAGACGAGTAATGTATTGCTTGACAAGGATTTTAATGCCAAAATTTCTGATTTTGGCTTGGCAAAGCTAAATGAAGATGATAATACTCACATCAGCACCCGTGTTGCAGGAACTATAGGTTATATGGCACCGGAATATGCAATGCGAGGTTACTTGACAAACAAGGCCGACGTTTATAGCTTCGGAGTAGTTGCATTAGAAATTGTCAGCGGAAAGAGCAACACAAACTATAGGCCAAAGGAGGAGTTCGTTTACCTTCTTGATTGGGCATATGTATTGCAAGAGAGAGGAGGTCTATTGGAGTTGGTAGATCCATTGCTGGGTTCAAATTATTCAGTAGAAGAGGCAATGGTGATGCTAAATGTAGCTCTTTTATGCACCAATGCCTCCCCAACATTGAGGCCGACCATGACCCAAGTGGTGAGCATGCTTGAAGGTCGAACTCCCGTTCAAGACTTGCTCGCTGATCCTGGCTTCTCGACCGATCCCAAATACAAAGTCATAAGGAATCACTTCTGGCAGCAACCTAATGCTTCGAGTTTCAACTCCTTAAGTTCATGTATTGAAACAGAAGTTACTGGCCATCTTATATGGGTCGGTTCAGTCGAGTCTGAAAAGACGAAGACCGAACTGGTAGCTTCATAG 1833 42.23 MTDRYSLHINCGGKEAIIDGKKYEADIEQRGASMFYSGQNWAFSSTGNFMDNDVDVDSYMRTNTSALTNVSAPNSRLYSTARTSPLSLTYYGLCLVNGNYTVNLHFAEIIFINGSSFYSLGKRIFDVYIQDKLVLKDFNIELEAGGTGKPIIKNFTAAVTSHTLKIHLYWTGKGTTGIPLRGNYGPLISAISVDPNFKPPTYAKKNYIKVIIGTTGATLLLFILVLGMRRKVLFPLTLINVISAELKGMDLLTGLFTLRQMKAATKNFDAENKLGEGGFGTVYKGLLSDGTKIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLLLVYEFMENNCLSRTLFGKDPTCRLKLDWPTRKKICVGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGYLTNKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQERGGLLELVDPLLGSNYSVEEAMVMLNVALLCTNASPTLRPTMTQVVSMLEGRTPVQDLLADPGFSTDPKYKVIRNHFWQQPNASSFNSLSSCIETEVTGHLIWVGSVESEKTKTELVAS 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3049621 3052647 + Bpe005520.1 Bpe12g00277 112290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00277 610 Pfam Protein tyrosine and serine/threonine kinase 270 490 IPR001245 GO:0004672|GO:0006468
Bpe12g00277 610 Gene3D - 2 195 - -
Bpe12g00277 610 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Bpe12g00277 610 Gene3D Phosphorylase Kinase; domain 1 241 343 - -
Bpe12g00277 610 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 562 - -
Bpe12g00277 610 CDD STKc_IRAK 274 542 - -
Bpe12g00277 610 SMART serkin_6 268 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00277 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Bpe12g00277 610 ProSiteProfiles Protein kinase domain profile. 268 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00277 610 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 562 - -
Bpe12g00277 610 Gene3D Transferase(Phosphotransferase) domain 1 344 549 - -
Bpe12g00277 610 SUPERFAMILY Protein kinase-like (PK-like) 254 541 IPR011009 -
Bpe12g00277 610 Pfam Malectin domain 6 191 IPR021720 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00744 Bpe-Chr8:9031379 Bpe12g00277 Bpe-Chr12:3049621 0 dispersed
Bpe09g00268 Bpe-Chr9:1967856 Bpe12g00277 Bpe-Chr12:3049621 0 dispersed
Bpe11g01119 Bpe-Chr11:8355601 Bpe12g00277 Bpe-Chr12:3049621 0 dispersed
Bpe15g01064 Bpe-Chr15:19911652 Bpe12g00277 Bpe-Chr12:3049621 6.97E-100 dispersed
Bpe12g00277 Bpe-Chr12:3049621 Bpe03g00872 Bpe-Chr3:28467824 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63622 PF07714 PK_Tyr_Ser-Thr 1.50E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00277 - - csin:114299438 923.309