Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00286 ATGGATGAACCTTTTCTGTCTAGACCTGGAGCAGAAGAAGAATCTACCAGACTATCAACGAGAAGAGGATCTCCTTCTGGGTACATAGACATCGGACAATCGTATCGACGGTCAACTCCGCATCTAATCACAAGCGACACAATCATCCCAATTATCGCAACTCCGAGATCTCCTTACATAAACGTCCTATCCACTTCCAAGACACGAATTGCCCGCCGTTCCCACTCCGCGCCTGCGCTTTTCACCAACGTTAGGGAAGCGTTCCGAGGTTCGTCGGACTCTGGGGCTGGTACGAAATTGCCCCCTTTGATCGTCCGGCAAGCTTTCATCGGCCTCATTCTCTACTTCGCGATCGGGGTAGTAATTTACCTCACCACTGGGAGTTTCAAAGGGCAAGCCACGTTTAAGCCAGTAGATGCTATGTACTTCACCGTCGTCACTCTCTGTACCATTGGCTATGGCGATATAGTTCCGGATTCCACATTTACAAAAATTTTTACTTGCGTTTTCATACTTGTTGGTTTTGGATTCCTTGACATTTTGCTCAACGGATTGGTCGTTTACATATGCGATCGTCAAGAGGCGGTTTTGCTGAGTACCGTCGACGAGAATCGATTCAACGCCATGATTAGAGCTTATATGGTCGACAGAGAAAAGGGAAGAATGAGAATAAGAACGAAGGTGTGTTTGGCTGTGGGTATTGTGATTATCTGCATTGCAGTAGGGACAATCGCCATTCATTTTCTGGAGACATTAACTTGGGTTGATAGCATCTACCTCTCGATTACTTCTGTGTCAACAGTGGGCTATGGAGATTTCTCTTTCACGACTGTAGAAGGAAGGTGCTTTGCAATTATCTGGCTGTTGGTCAGCACTTTGGCTGTTGCCAGGGCCTTTCTGTATCTGACTGAGTTCAGGATCGACAAAAGAAACAGAAAAACCATGACGTGGGTTCTTCAGAAGAAGATAACAATTGGGGATTTAGTTGCTGCCGACATAGATCACAATGGATTTATCAGCAAATCTGAGTTTATCATTTACAAGCTGAAAGAGATGGGGAAAATCTCAGAGAAAGATGTTGTCATGATCGGTAAACAATTTGATTTATTGGACGCGAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATTAA 1161 44.79 MDEPFLSRPGAEEESTRLSTRRGSPSGYIDIGQSYRRSTPHLITSDTIIPIIATPRSPYINVLSTSKTRIARRSHSAPALFTNVREAFRGSSDSGAGTKLPPLIVRQAFIGLILYFAIGVVIYLTTGSFKGQATFKPVDAMYFTVVTLCTIGYGDIVPDSTFTKIFTCVFILVGFGFLDILLNGLVVYICDRQEAVLLSTVDENRFNAMIRAYMVDREKGRMRIRTKVCLAVGIVIICIAVGTIAIHFLETLTWVDSIYLSITSVSTVGYGDFSFTTVEGRCFAIIWLLVSTLAVARAFLYLTEFRIDKRNRKTMTWVLQKKITIGDLVAADIDHNGFISKSEFIIYKLKEMGKISEKDVVMIGKQFDLLDASNCGKITLADLMED 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3331927 3333214 + Bpe005529.1 Bpe12g00286 112299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00286 386 Pfam Ion channel 234 304 IPR013099 -
Bpe12g00286 386 Pfam Ion channel 112 186 IPR013099 -
Bpe12g00286 386 MobiDBLite consensus disorder prediction 1 19 - -
Bpe12g00286 386 ProSitePatterns EF-hand calcium-binding domain. 332 344 IPR018247 -
Bpe12g00286 386 MobiDBLite consensus disorder prediction 1 30 - -
Bpe12g00286 386 PANTHER OS01G0696100 PROTEIN 51 382 - -
Bpe12g00286 386 Gene3D - 197 327 - -
Bpe12g00286 386 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 51 382 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe12g00286 386 Gene3D - 104 196 - -
Bpe12g00286 386 SUPERFAMILY Voltage-gated potassium channels 217 351 - -
Bpe12g00286 386 Gene3D - 328 386 - -
Bpe12g00286 386 PRINTS Two pore domain K+ channel signature 146 174 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe12g00286 386 PRINTS Two pore domain K+ channel signature 266 275 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe12g00286 386 SUPERFAMILY Voltage-gated potassium channels 104 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00807 Bpe-Chr1:9408926 Bpe12g00286 Bpe-Chr12:3331927 1.53E-92 dispersed
Bpe08g01094 Bpe-Chr8:13015500 Bpe12g00286 Bpe-Chr12:3331927 2.19E-60 dispersed
Bpe12g00286 Bpe-Chr12:3331927 Bpe15g00141 Bpe-Chr15:11549632 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00286 K05389 - jre:109019999 545.428