Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00308 ATGGCAGCGAGTCCAATAACAGAAGTTTCGCCACACAAATCGGCCAGTCCTCCCATGGACGTGGAGGCGCAACAACCTGACCCATCGAAAGAAATGGTCGAGGATTTTGACTACTCGAAGAGAGCACAGTGGCTTCGCGCGGCGGTGCTTGGCGCCAACGATGGCCTGCTCTCTGTGGCAAGCCTGATGATGGGCGTTGGCGCCATTCACGAGGACTCTAAGACCATGGTGCTTACAGGCGTTGCGGGACTGGTTGGTGGAGCTTCAAGCATGGCCATTGGAGAGTTCGTGTCTGTCTTCTCACAGCGTGACATTGAGGTTGCTCAAATTAAGCGAACTGGGATTGGGAAGGTAGAGAGTGAGAAGGAAAGAGAGAAATTGCCTAACCCTTTCCATGCAGCTGCGGCCTCGGCGTCTGCGTTCTCCGTGGGGGCGACTGTGCCACTGCTTGCGGCGTCTTTCGTGCGTGTTTTCTGGATGAGGGTGGTGGTGGTGGCGGTTGTTGTGAGCTTGGCTTTAATGGCTTTTGGATGGGTAGGGGCGTTGCTGGGGAAGGCGCCTGTGCTCAAATCGAGTGGGAGAATTTTGGTTGGTGGGTGGTTGGCCATGGCCATCACCTATGGCTTAACAAAGCTTCTTGGTCATTCTGCTGGACTATGA 660 55.0 MAASPITEVSPHKSASPPMDVEAQQPDPSKEMVEDFDYSKRAQWLRAAVLGANDGLLSVASLMMGVGAIHEDSKTMVLTGVAGLVGGASSMAIGEFVSVFSQRDIEVAQIKRTGIGKVESEKEREKLPNPFHAAAASASAFSVGATVPLLAASFVRVFWMRVVVVAVVVSLALMAFGWVGALLGKAPVLKSSGRILVGGWLAMAITYGLTKLLGHSAGL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5023501 5024160 + Bpe005554.1 Bpe12g00308 112321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00308 219 Pfam VIT family 45 115 IPR008217 GO:0005384|GO:0030026
Bpe12g00308 219 Pfam VIT family 122 210 IPR008217 GO:0005384|GO:0030026
Bpe12g00308 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 214 IPR008217 GO:0005384|GO:0030026
Bpe12g00308 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 18 214 - -
Bpe12g00308 219 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00308 Bpe-Chr12:5023501 Bpe15g00105 Bpe-Chr15:9786368 1.31E-129 dispersed
Bpe12g00308 Bpe-Chr12:5023501 Bpe12g00316 Bpe-Chr12:6026311 4.09E-71 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00308 K22736 - egr:104419937 227.639