Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00316 | ATGGCTGCTACCGGTAATGGAGACAAATCAACTCCAGATAGTCACGTTGGAATAATTCAAATGAATGCAAACGACCCTGAGACAGGCCATTTACAACCAACCCAGGATGGCCATATTGACTATTCGAAAAGAGCACAGTGGCTTCGAGCAGCTGTTCTGGGAGCCAATGATGGGCTTCTCTCAGTGTCGTCCATAATGATGGGTGTGGGAGGCGTGAAGAAAGATGCAAAAGCCATGTTTCTTGCTGGCTTTGCAGGCTTAGTCGCAGGAGCTTGTAGCATGGCGATAGGAGAGTTTGTTTCGGTTTACACTCAGTACGACATAGTAAAGGGTCAAATGAAAAGAGAGCAGAAAAATGAGAGAGGAATCGGCTCAAACGAAGAAGGAGAGGAGAAAGAGAAGCTCCCGAGCCCAGTCCAGGCAGCCGTGGCCTCAGCCCTTGCATTTTCAGTCGGAGCCATGGTGCCGCTAGTGGGTGCGTCGTTCATAGCAGAGCATAAGGTGAGGCTTGTTGTGATGGGGGCGGTGGCATGCGTGGCGCTGGCAGTGTTTGGAGCGGTCGGAGCAGTGCTTGGAAAGACTCCAGTGGGGAGGTCTTGTTTCAGGGTTGTGATTGGAGGGGTGATGGCCATGGCCATCACATTTGGACTCACCAAACTGGCTGCATCCACAGGGCTTCAACTCTGA | 687 | 51.67 | MAATGNGDKSTPDSHVGIIQMNANDPETGHLQPTQDGHIDYSKRAQWLRAAVLGANDGLLSVSSIMMGVGGVKKDAKAMFLAGFAGLVAGACSMAIGEFVSVYTQYDIVKGQMKREQKNERGIGSNEEGEEKEKLPSPVQAAVASALAFSVGAMVPLVGASFIAEHKVRLVVMGAVACVALAVFGAVGAVLGKTPVGRSCFRVVIGGVMAMAITFGLTKLAASTGLQL | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6026311 | 6026997 | - | Bpe005564.1 | Bpe12g00316 | 112329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00316 | 228 | CDD | Nodulin-21 | 46 | 195 | - | - | |
Bpe12g00316 | 228 | Pfam | VIT family | 48 | 120 | IPR008217 | GO:0005384|GO:0030026 | |
Bpe12g00316 | 228 | Pfam | VIT family | 129 | 218 | IPR008217 | GO:0005384|GO:0030026 | |
Bpe12g00316 | 228 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bpe12g00316 | 228 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 12 | 223 | IPR008217 | GO:0005384|GO:0030026 | |
Bpe12g00316 | 228 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Bpe12g00316 | 228 | PANTHER | VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 | 12 | 223 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01967 | Bpe-Chr2:21529086 | Bpe12g00316 | Bpe-Chr12:6026311 | 6.81E-08 | dispersed | |
Bpe12g00316 | Bpe-Chr12:6026311 | Bpe14g00446 | Bpe-Chr14:4078724 | 3.39E-66 | dispersed | |
Bpe12g00308 | Bpe-Chr12:5023501 | Bpe12g00316 | Bpe-Chr12:6026311 | 4.09E-71 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00316 | K22736 | - | mnt:21403537 | 262.692 |