Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00316 ATGGCTGCTACCGGTAATGGAGACAAATCAACTCCAGATAGTCACGTTGGAATAATTCAAATGAATGCAAACGACCCTGAGACAGGCCATTTACAACCAACCCAGGATGGCCATATTGACTATTCGAAAAGAGCACAGTGGCTTCGAGCAGCTGTTCTGGGAGCCAATGATGGGCTTCTCTCAGTGTCGTCCATAATGATGGGTGTGGGAGGCGTGAAGAAAGATGCAAAAGCCATGTTTCTTGCTGGCTTTGCAGGCTTAGTCGCAGGAGCTTGTAGCATGGCGATAGGAGAGTTTGTTTCGGTTTACACTCAGTACGACATAGTAAAGGGTCAAATGAAAAGAGAGCAGAAAAATGAGAGAGGAATCGGCTCAAACGAAGAAGGAGAGGAGAAAGAGAAGCTCCCGAGCCCAGTCCAGGCAGCCGTGGCCTCAGCCCTTGCATTTTCAGTCGGAGCCATGGTGCCGCTAGTGGGTGCGTCGTTCATAGCAGAGCATAAGGTGAGGCTTGTTGTGATGGGGGCGGTGGCATGCGTGGCGCTGGCAGTGTTTGGAGCGGTCGGAGCAGTGCTTGGAAAGACTCCAGTGGGGAGGTCTTGTTTCAGGGTTGTGATTGGAGGGGTGATGGCCATGGCCATCACATTTGGACTCACCAAACTGGCTGCATCCACAGGGCTTCAACTCTGA 687 51.67 MAATGNGDKSTPDSHVGIIQMNANDPETGHLQPTQDGHIDYSKRAQWLRAAVLGANDGLLSVSSIMMGVGGVKKDAKAMFLAGFAGLVAGACSMAIGEFVSVYTQYDIVKGQMKREQKNERGIGSNEEGEEKEKLPSPVQAAVASALAFSVGAMVPLVGASFIAEHKVRLVVMGAVACVALAVFGAVGAVLGKTPVGRSCFRVVIGGVMAMAITFGLTKLAASTGLQL 228
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 6026311 6026997 - Bpe005564.1 Bpe12g00316 112329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00316 228 CDD Nodulin-21 46 195 - -
Bpe12g00316 228 Pfam VIT family 48 120 IPR008217 GO:0005384|GO:0030026
Bpe12g00316 228 Pfam VIT family 129 218 IPR008217 GO:0005384|GO:0030026
Bpe12g00316 228 MobiDBLite consensus disorder prediction 1 18 - -
Bpe12g00316 228 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 12 223 IPR008217 GO:0005384|GO:0030026
Bpe12g00316 228 MobiDBLite consensus disorder prediction 1 37 - -
Bpe12g00316 228 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 12 223 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01967 Bpe-Chr2:21529086 Bpe12g00316 Bpe-Chr12:6026311 6.81E-08 dispersed
Bpe12g00316 Bpe-Chr12:6026311 Bpe14g00446 Bpe-Chr14:4078724 3.39E-66 dispersed
Bpe12g00308 Bpe-Chr12:5023501 Bpe12g00316 Bpe-Chr12:6026311 4.09E-71 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00316 K22736 - mnt:21403537 262.692