Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00365 ATGAGCATAAGAAGAAATTTCTTGTTCATTTTCTCTGCAATTTTCTTGACTCCGGTGATTTTCTCGCCGGTGATCGGCGAGCCGATTGAGGATAAGGAGGCTTTGATCGATTTTTTCAACAACATCACACATTCACGCTTTCTCAATTGGGATGTGAGTACTTCCACTTGCAGAAATTGGACAGGAGTGTACTGTAACGTCGATGAATCTAGAGTGATGGCCGTTCGATTACCCGGATTCGGCTTCCACGGTCCGATCCCGACGAACACTCTTAGCCGTTTATCCGAACTTCAGATTTTAAGTTTCAGATCAAATGATATAACAGGGCCTTTTCCTTCAGATTTTTCCAAGCTAGAAAACTTGAATGGATTTTATTTGCAACACAACAAGTTTTCAGGTCCATTGCCTTCTGATTTCTCAGTTTGGAAGAATCTCACTGTCATCGATCTCTCCAACAATGCTTTCAATGGCAGCATTCCCTCATCGATTCTCAATCTAACCCACCTCACGGCTTTGAATCTCGCTAACAACTCGCTCTCCGGCGAAATTCCCGACCTTGATATTCCCAGTTTGCAGCATCTAGATTTGTCTAACAACAATCTTTCTGGGAGAGTTCCTAAATCTTTACAAAGATTTCCAAGTTGGGTTTTCTCAGGAAACAATCTCACACCAGAAATTGCTCTTCCTCCTGCATATCCAATTCTGCCACCAAATTCACAGCCATCCAACAAGGGAAAAGGTGTTAGCAACGCAGCTCTATTGGGTATTTTAATCGGAGGCCTGGCTCTAATTTTTTCTGCAGTTACTATTATTATTGCTGTTTGTTGGTCAGCTGGAGGAAAAATAAACAAGACTCCATCAAAGGCCAAGAAGAAAGAAATTGCTGTGAAGAACAGAACTCCTGAGATTCAAAACAAGGATAGCACTCTCAAATTCTTAAATGATTGCAGTTTTTCGTTCGATCTAGAGGATTTGTTGAGAGCTTCTGCCGAGGTTTTAGGTAAAGGAACGTTTGGAACGACGTATAAGGCGGCTCTGGACGACGGAACAACCGTGGTGGTGAAGAGATTGAAAGAAGTAAGTGTCACAAAGAAGGAGTTTGAACAGAATATGGAGGTTTTCGGAAGTATTAAGCATGAAAATGTGGCTGCTCTGAAAGCATATTATTATTCGAAAGACGAGAAACTTGTCGTTTACGATTATTACGAGCAAGGAAGCGTATCAGCAATGTTACATGGTAAACGAGAGGATGGAGGGACATTAATCGACTGGGATACTCGTCTACGAGTTGCTATAGGTGCAGCCAGAGGCATTGCTCACATACACTCAGACAAAGGTGGTAAACTCGTTCATGGCAACATAAAAGCCTCGAACACTTTCCTCAACGTAAAAGGCTTTGGTTGTGTTAGTGATGCGGGCATGTCGACGCTGATGAACCCCCTCCCTGCACCTGCGTCGAGGATGATGGGGTATCGACCTCCGGAACTGATGGATGTGCGGAAAGCATCGCAGCTGTCTGATGTGTATAGTTTCGGGGTCTTGGTGTTGGAGCTTCTCACCGGAAAGTCGCCCGTGCATGCAAGAGGGGGTGAAGAGATTGTTCATTTAGTGAGGTGGGTGAATTCTGTGGTGAGAGAAGAGTGGACTGCTGAGGTTTTCGACATGGAGCTTTTGAAGTATTCTAACATAGAGGAAGAGATGGTGGCTATGCTGCAAATTGGACTTTCTTGCGTGGCTAAAATGCCCGAGCAGAGGCCAAAAATGGCGGATGTTTTGGCGAAGATCGAACAAGTTCGTCAATTGAATGGTGATTTGTCAAAATCTGAAGATTTGACTCCGTCACGTCGGGTGTTCGAGATCGGATCTGCCTCGAATTCTCGTTGA 1884 44.16 MSIRRNFLFIFSAIFLTPVIFSPVIGEPIEDKEALIDFFNNITHSRFLNWDVSTSTCRNWTGVYCNVDESRVMAVRLPGFGFHGPIPTNTLSRLSELQILSFRSNDITGPFPSDFSKLENLNGFYLQHNKFSGPLPSDFSVWKNLTVIDLSNNAFNGSIPSSILNLTHLTALNLANNSLSGEIPDLDIPSLQHLDLSNNNLSGRVPKSLQRFPSWVFSGNNLTPEIALPPAYPILPPNSQPSNKGKGVSNAALLGILIGGLALIFSAVTIIIAVCWSAGGKINKTPSKAKKKEIAVKNRTPEIQNKDSTLKFLNDCSFSFDLEDLLRASAEVLGKGTFGTTYKAALDDGTTVVVKRLKEVSVTKKEFEQNMEVFGSIKHENVAALKAYYYSKDEKLVVYDYYEQGSVSAMLHGKREDGGTLIDWDTRLRVAIGAARGIAHIHSDKGGKLVHGNIKASNTFLNVKGFGCVSDAGMSTLMNPLPAPASRMMGYRPPELMDVRKASQLSDVYSFGVLVLELLTGKSPVHARGGEEIVHLVRWVNSVVREEWTAEVFDMELLKYSNIEEEMVAMLQIGLSCVAKMPEQRPKMADVLAKIEQVRQLNGDLSKSEDLTPSRRVFEIGSASNSR 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8935676 8938119 + Bpe005621.1 Bpe12g00365 112378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00365 627 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Bpe12g00365 627 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00365 627 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Bpe12g00365 627 PANTHER OS05G0588300 PROTEIN 16 615 - -
Bpe12g00365 627 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bpe12g00365 627 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Bpe12g00365 627 Pfam Protein tyrosine and serine/threonine kinase 331 594 IPR001245 GO:0004672|GO:0006468
Bpe12g00365 627 SUPERFAMILY L domain-like 43 215 - -
Bpe12g00365 627 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Bpe12g00365 627 PANTHER LRR RECEPTOR-LIKE KINASE 16 615 - -
Bpe12g00365 627 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Bpe12g00365 627 Gene3D Ribonuclease Inhibitor 29 236 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01513 Bpe-Chr8:15802651 Bpe12g00365 Bpe-Chr12:8935676 0 dispersed
Bpe12g00365 Bpe-Chr12:8935676 Bpe13g01075 Bpe-Chr13:16329234 0 dispersed
Bpe12g00365 Bpe-Chr12:8935676 Bpe04g01792 Bpe-Chr4:23413628 4.84E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63624 PF07714 PK_Tyr_Ser-Thr 9.90E-31 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00365 - - csv:101207123 796.964