Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00381 ATGGGTTATCCACCGGAGAAAACTGTGAGGTTTCAGAATTGGAATTCTGAGAAAACTACTGGCGAGTTATTTTTCACTGATGGCGGAACAAATTCAGAAAAGATCATTATTAGGGATAGATCAGTTTCAGAAAAGCTTCAAACAGGGTTTGAATCAGGGGCAAACAGATTTATAAGAATAAAGAAATCATTGAGATCATCTTCATTTAATAAATTTGTGGCCAAAGGCTTAGGTTCTGGAAATAAATTTCTTGATCCACAGGGACCTTTCCTGCAGAAGTGGAACAAGATATTTGTACTGTCTTGTCTAGTTGCAGTTTCACTGGATCCATTGTTCTTTTATGTTCCTGTGATTAATGACTCGGAGAAGTGTCTTTGGTTGGATCGTAGGATGGAAATTATGGCCATTATCCTACGATCATTTACTGACATATTCTATGTAGTACATATTATTTTTCAATTTCGTACTGGCTTTATTGCCCCCTCTTCCCGAGTATTTGGTAGAGGTGTTTTGGTTGAAGATTCTTGGGAAATAGCAAAGAGGTACCTGTCATCATACTTTCTAATCGATATTCTTGCCGTCCTCCCTCTACCTCAGGTGGTTATTTTAATAGTCATTCCAAAATTAGGAGGCTCAAGATCTTTGAATACGAAGAATATATTGAAATTTGTTGTCCTCTTTCAATATATTCCGAGGATTCTTAGAATTTATCCGCTATACAAAGAAGTTACAAGGACCTCTGGCATTCTAACTGAGACTGCATGGGCTGGAGCTGCATTTAATCTGTTACTTTACATGCTAGCAAGCCATGTGCTTGGAGCATTCTGGTATCTGGTTTCCATTGAACGAGAAACCACCTGCTGGCAACAAGCTTGCCTGAATCAGACTAATTGTGTTCTTGATTCATTGTATTGTGATGGGAAGAGTCCTCGAGGAAATTTATTTCTGAATACATCTTGCCCAATTCAAGACCCAGACAAGAAAAAATTTGATTTTGGAATATTCCTTGATGCTCTTCAATCTGGCGTTGTTGAGTCCATGGATTTTCCACAGAAGTTCTGTTACTGTTTCTGGTGGGGACTGAGAAATTTGAGTTCTCTTGGGCAAAATCTTGAGACAAGTACATATGTTTGGGAAATTGGCTTCGCAGTTTTGATTTCCATTGCAGGCTTGGTGTTATTTTCCTTTCTCATCGGCAATATGCAGACGTATCTGCAATCAACGACCACAAGATTAGAGGAGATGAGGGTAAAAAGAAGAGACGCAGAGCAGTGGATGTCACACCGCTTGCTTCCTGAGAGCCTGAGGGAGCGGATTAGAAGGTATGAACAATACAAATGGCAGGAAACTAGAGGTGTTGATGAAGAGAACCTGGTTCGAAATCTTCCCAAAGATCTTCGAAGAGACATCAAGCGGCATCTCTGCTTGGATCTTCTTATGAGAGTTCCAATGTTTGAAAAGATGGATGAACAATTGTTGGATGCAATGTGTGACCGACTCAAACCTGTGCTCTATACAGAGGAGAGTTACATTGTTCGGGAAGGTGACCCGGTGGACGAGATGCTTTTCATCATGCGGGGGAAGCTATTAACGATGACTACAAATGGCGGACGAACTGGGTTCTTCAATTCCGAGCACCTCAAAGCAGGGGACTTTTGTGGAGAAGAATTACTAACATGGGCCCTTGATCCTCACTCCTCTGTTAATCTCCCCATCTCGACTAGAACAGTTCAAGCTCTTGTAGAAGTCGAGGCCTTTGCCTTGAAAGCCGATGATTTGAAGTTTGTGGCCTCTCAGTTCCGGCGGCTTCACAGCAAACAGCTCCGCCACACTTTTAGGTTGTACTCTCAGCAATGGAGGACATGGGCAGCATGTTTCATCCAAGCAGCCTGGCGTCGCTACAGCAAAAAGAAGCTGGAAGAGTCGCTCCGCGAAGAGGAGAATCGATTGCAAGATGCATTGGCAAAAACCGGTGGTAGCTCACCAAGCTTGGGTGCCACCATTTATGCATCTCGATTTGCGGCAAATGCCCTTCGTTTAATTGGACGGAACAGTGCTCGGAAAGCAAGGGTGGCTGAAAGAGTTCCGCCTATGCTCCTTCAGAAGCCTGCCGAGCCAGACTTCACGGCCGAGTAA 2136 43.07 MGYPPEKTVRFQNWNSEKTTGELFFTDGGTNSEKIIIRDRSVSEKLQTGFESGANRFIRIKKSLRSSSFNKFVAKGLGSGNKFLDPQGPFLQKWNKIFVLSCLVAVSLDPLFFYVPVINDSEKCLWLDRRMEIMAIILRSFTDIFYVVHIIFQFRTGFIAPSSRVFGRGVLVEDSWEIAKRYLSSYFLIDILAVLPLPQVVILIVIPKLGGSRSLNTKNILKFVVLFQYIPRILRIYPLYKEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLVSIERETTCWQQACLNQTNCVLDSLYCDGKSPRGNLFLNTSCPIQDPDKKKFDFGIFLDALQSGVVESMDFPQKFCYCFWWGLRNLSSLGQNLETSTYVWEIGFAVLISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEHLKAGDFCGEELLTWALDPHSSVNLPISTRTVQALVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRLYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKTGGSSPSLGATIYASRFAANALRLIGRNSARKARVAERVPPMLLQKPAEPDFTAE 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9134036 9138809 + Bpe005637.1 Bpe12g00381 112394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00381 711 Coils Coil 636 656 - -
Bpe12g00381 711 CDD CAP_ED 484 615 IPR000595 -
Bpe12g00381 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 710 - -
Bpe12g00381 711 Pfam Ion transport protein 94 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe12g00381 711 Pfam Cyclic nucleotide-binding domain 504 595 IPR000595 -
Bpe12g00381 711 SUPERFAMILY cAMP-binding domain-like 413 606 IPR018490 -
Bpe12g00381 711 SUPERFAMILY Voltage-gated potassium channels 85 406 - -
Bpe12g00381 711 Gene3D - 96 408 - -
Bpe12g00381 711 Gene3D Helix hairpin bin 410 475 - -
Bpe12g00381 711 Gene3D Jelly Rolls 482 602 IPR014710 -
Bpe12g00381 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 710 - -
Bpe12g00381 711 ProSiteProfiles cAMP/cGMP binding motif profile. 484 567 IPR000595 -
Bpe12g00381 711 SMART cnmp_10 484 615 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00240 Bpe-Chr3:3185717 Bpe12g00381 Bpe-Chr12:9134036 9.15E-139 dispersed
Bpe01g00198 Bpe-Chr1:1194717 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe01g00647 Bpe-Chr1:4382640 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe01g00671 Bpe-Chr1:4729042 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe02g00224 Bpe-Chr2:1549514 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe03g00818 Bpe-Chr3:28141727 Bpe12g00381 Bpe-Chr12:9134036 1.69E-116 transposed
Bpe05g01029 Bpe-Chr5:22890356 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe09g00487 Bpe-Chr9:13357648 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe10g00594 Bpe-Chr10:12858504 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe11g01439 Bpe-Chr11:10686813 Bpe12g00381 Bpe-Chr12:9134036 2.53E-119 transposed
Bpe12g00588 Bpe-Chr12:11659486 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
Bpe12g00381 Bpe-Chr12:9134036 Bpe03g00181 Bpe-Chr3:2220076 0 wgd
Bpe12g00381 Bpe-Chr12:9134036 Bpe03g00239 Bpe-Chr3:3180852 2.92E-139 wgd
Bpe12g00381 Bpe-Chr12:9134036 Bpe07g01010 Bpe-Chr7:15746149 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00381 K05391 - rcu:8274372 1164.83