Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00392 ATGTCGGAGTCTCTCCCTTCGTCGGAGAAATCTCGGGGAAAAACGGATCAATCGACGACCTCTAGAGCCAAACTTCGTAAGATACCTCCGATCCCTCTTCGCCGAGCTCCGAAAGATGGAGCTGCGTGTAATGGACCAGAGCGAGAAGAGGAAGAAATGGATGTTTCTTCGATTATTATGGCGTCGTCACTTGGGTTAAACCATATCCGGACCAGGTCTGCTCCTTCACCGCTTCGATTCTCTTCGTCTATAGGGACCTCAATCGATGTCGAAAATAAGAGAGAGGATGGGAAAGGTAACGTTCAGGCTCCGCCACAAATCTCCTCAAAGGATCAAGGGAATAAGATCCCGCGGAATCAATCAAAATCTTTGAGACAACCTCCGGATCTTAATGTAGGTTTGGAGGACAATAATACCTCGCTTGCAAAAGAAATTCAGTCTCCACGTGTCCGAGAAATACTGCGCGTCACAAGTGGGTTAAAGAGGAGAACTCCAGATATCAAGAGCTTCTCTCATGAACTTAATTCTAAGGGAGTTAGAGCTTATCCTGCTTGGAAGCCTCGAGCATTGGGGCATATGGAAGAAGTTATGGTTGCAATCAGAGAAAAATTTGATAGATTAAAAGAGGAAGTAAATTCTGACTTAGGTACATTTGCTGGAGATTTAGTGGGTATACTTGAAAGGACATCACATTCTCAACCTGAAGGGAGAGAGAGTCTGGAAGATTTGTTGGTGGTTGCTAGACAATGTGCAAAGATGTCATCTGATGAGTTTTGGGCGAAATGTGAAGCCATTGTACAGAAGCTCGATGACCGACGCCAGGAGCTACCAATGGGAGTTCTTAAACAGGTTCACACCCGGCTTCTTTTCATCCTCACTCGGTGTACTCGTCTCGTCCAGTTTAGAAAGGAGAGTGGTTATGAAGAAGAGCACATTCTGGGTTTTCACCAATTTAGTGATCTAGGAGTTTATCCTGCTCAAATTATGGAGGAAAAGGTAGTGAAGCAAATTACTAAATCTCATGGGAAAGAAGAGGGAATTCTAGTTGTAAAACCTGATCAAGGAGACCAACATCTTGCTAGCAAAACTGACTGTGTGGAGGTTGGCACTGCCAAAAGTGCAGATTCATCAGGTAGTTATAGGATGTCATCCTGGAAGAAGCTTCCATCTGCTGTTGAGAGAAATCGGAGAGGGCCCGATTCAGTTGAAACACCCCCCATGGATAAATCAGGTCAGATGAATGCTAAAGGTGCGAAGGGTCATGGCGATGACTTTGTGGATACCCCTTCATCCAATACTGAACATTTAGAAGGCAAGAGAAGAGCTCAAAGAGTTCCTTGGGGATTGTGGGGAGATAATCAAACTGTTACTTGTGAGACCCTAATGATCTGTCGTATTTGTGAGGTTGAAATTCCAACTGTACATGTGGAGGAACACTCTCGAATATGTACAATTTGTGACAGATGTGACTTGAAAGGCTTAACAGTGAATGAACGACTTGAAAGAGTTGCAGAAATTCTTGAAAAGATATTGGAATCGTGGACGCCAAAAGGCACACTAAAGAGAACAGATTCTTCGCATGCAAATTTTGATAGAGTTCTGCCAATTGTACAAGAAGGCATTGATGACTTTTCACCTAAACTTAACAGACAGTCCCATCGACTCCCTGTAGACATGTTTGATTGTGCCCCTGACATTGATGGCACTTCTGCTATTGAAGATCTACATATTTCACCTGAAATGTCATGCAATACACGCTCTTCTTTGTCCCCAGATCTTAGTACAAAAGACTTATCCACTGGAAGTTTGACACCAAGATCCCCACTACTAACACCGAGAATCAACCATATTGAGTTGTTGTTGAGTGGACATAGAGCAATATCAGAACTAGAAAACTATCAGCAGGTAGTTTCTTACAAGTTTCATGGGCACTCCCTTTTGTATTTTGCTACTAACTTTTCTGTGGAATTACAGATAAATAAACTATTGGAAATAACTCGCTCCATTTCAAATATAAACAATCGTGACTACAGTGCCTTGGAGCATATGCTTGATCAACTAGAAGACCTAAAATATGCTATTCAGGATAGGAAGGTGGATGCTCTAGTGGTAGAGACTTTTGGAAGGCGTATAGAGAAACTCTTGCAGGAAAAGTATGTACATCTTTGCGGTCAGATAGAAGATGATAAAGTAGCATCCTCAAATAATATGGCTGATGAAGAGAGTTCCATGGAAAACGAAACAATGCGTGGTTTCCGTACAAGCCCTATCAATGTATGTTCAAAAGATCGGACATCTATAGAAGATTTTGAAATAATAAAACCAATTAGCAGAGGGGCATTTGGACGAGTTTTTCTTGCAAGAAAAAGAGCTACCGGTGACTTGTTTGCAATAAAGGTTTTAAAGAAAGTTGACATGATACGTAAAAATGCAGTTGAAAGTATTTTAGCTGAGCGTAACATACTTATATCAGTTCGCAACCCATTTGTGGTTCGCTTTTTCTACTCTTTCACGTGTAGGGAAAACCTTTATCTCGTCATGGAGTACTTAAATGGTGGAGATCTTTACTCTTTATTGAGAAATCTAGGTTGTTTAGATGAAGACATGGCACGCATCTACATAGCAGAAGTTGTTCTCGCCTTGGAATATTTGCACTGTCTTAATGTGATCCACAGAGACCTAAAGCCAGATAACCTGTTAATTGGTCAAGATGGCCATATTAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATTGACAGTACGGATGATTTATCAGATTCGTCAGTCAATGAAACTAATTTTCTTGGAGACGATGAACCAAAATCTCAAACTTCATCAAGAAGAGAACAGCGCCAAAAGCAATCAGTTGTTGGTACCCCTGATTATTTGGCACCTGAGATCCTTCTTGGCATGGGACATGGTGCAACTGCTGATTGGTGGTCTGTTGGTATCATTCTTTTTGAGCTTCTCGTAGGCCTTCCACCCTTTAATGCTGAACGTCCGCAGAAAGTTTTTGATAATATTATAAATAGAGACATACCTTGGCCCAAGGTACCTGAAGAGATGAGCAATGAAGCATATGATTTGATTGATAAACCCTCCCAAACAAAATGCTTTAAGTACTTAGTGAAGCAGCACATTTTTTTCAAGGATATTAACTGGGAAACACTTGCAAGACAAAAGGCTATGTTTATACCATCAGCGGAGCCTCATGACACTAGTTATTTCATGAGCCGCTACATATGGAACCCTGAAGATGAGAGTGTTAATGGAGGTAGTGACTTTGATGACTTAACCGATTCTTGTAGCAGTGGTTCATTCAGCAATCTTCAGGATGAAGAAGTAAGTTTACATCTCTCTTTGATTATTAGGAAATGTGTAGTAAAATTGTCTGAAGTTACTATTGATGGACGTGGACTTTAA 3429 41.21 MSESLPSSEKSRGKTDQSTTSRAKLRKIPPIPLRRAPKDGAACNGPEREEEEMDVSSIIMASSLGLNHIRTRSAPSPLRFSSSIGTSIDVENKREDGKGNVQAPPQISSKDQGNKIPRNQSKSLRQPPDLNVGLEDNNTSLAKEIQSPRVREILRVTSGLKRRTPDIKSFSHELNSKGVRAYPAWKPRALGHMEEVMVAIREKFDRLKEEVNSDLGTFAGDLVGILERTSHSQPEGRESLEDLLVVARQCAKMSSDEFWAKCEAIVQKLDDRRQELPMGVLKQVHTRLLFILTRCTRLVQFRKESGYEEEHILGFHQFSDLGVYPAQIMEEKVVKQITKSHGKEEGILVVKPDQGDQHLASKTDCVEVGTAKSADSSGSYRMSSWKKLPSAVERNRRGPDSVETPPMDKSGQMNAKGAKGHGDDFVDTPSSNTEHLEGKRRAQRVPWGLWGDNQTVTCETLMICRICEVEIPTVHVEEHSRICTICDRCDLKGLTVNERLERVAEILEKILESWTPKGTLKRTDSSHANFDRVLPIVQEGIDDFSPKLNRQSHRLPVDMFDCAPDIDGTSAIEDLHISPEMSCNTRSSLSPDLSTKDLSTGSLTPRSPLLTPRINHIELLLSGHRAISELENYQQVVSYKFHGHSLLYFATNFSVELQINKLLEITRSISNINNRDYSALEHMLDQLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHLCGQIEDDKVASSNNMADEESSMENETMRGFRTSPINVCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKVDMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARIYIAEVVLALEYLHCLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIDSTDDLSDSSVNETNFLGDDEPKSQTSSRREQRQKQSVVGTPDYLAPEILLGMGHGATADWWSVGIILFELLVGLPPFNAERPQKVFDNIINRDIPWPKVPEEMSNEAYDLIDKPSQTKCFKYLVKQHIFFKDINWETLARQKAMFIPSAEPHDTSYFMSRYIWNPEDESVNGGSDFDDLTDSCSSGSFSNLQDEEVSLHLSLIIRKCVVKLSEVTIDGRGL 1142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9344961 9351510 - Bpe005648.1 Bpe12g00392 112405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00392 1142 CDD STKc_MAST_like 776 1056 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 420 441 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 373 441 - -
Bpe12g00392 1142 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 20 1114 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 926 942 - -
Bpe12g00392 1142 Pfam Protein kinase domain 770 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00392 1142 SMART serkin_6 770 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00392 1142 SUPERFAMILY Protein kinase-like (PK-like) 752 1079 IPR011009 -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 102 135 - -
Bpe12g00392 1142 Gene3D Phosphorylase Kinase; domain 1 768 1078 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 89 135 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 926 959 - -
Bpe12g00392 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Bpe12g00392 1142 Coils Coil 190 210 - -
Bpe12g00392 1142 Gene3D Transferase(Phosphotransferase) domain 1 854 1069 - -
Bpe12g00392 1142 ProSiteProfiles Protein kinase domain profile. 770 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00392 1142 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 1114 - -
Bpe12g00392 1142 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01311 Bpe-Chr4:19547159 Bpe12g00392 Bpe-Chr12:9344961 8.55E-65 dispersed
Bpe08g00532 Bpe-Chr8:3615119 Bpe12g00392 Bpe-Chr12:9344961 1.21E-61 dispersed
Bpe10g00480 Bpe-Chr10:12055396 Bpe12g00392 Bpe-Chr12:9344961 1.68E-68 dispersed
Bpe12g00392 Bpe-Chr12:9344961 Bpe12g00646 Bpe-Chr12:12105926 0 dispersed
Bpe12g00392 Bpe-Chr12:9344961 Bpe06g00550 Bpe-Chr6:16532541 7.17E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63627 PF00069 Pkinase 1.80E-58 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00392 - - pxb:103962002 1412.51