Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00411 ACCATGGCTTCTTCAGTTTTCTCTCTCCCTATCCCTCCAATCTCCACTCGCTTTCGTAAGAGCAAATGGACACTCGCTTTCTCCTCCCTCACTCCTCTCCACCAACCAAAACCGGTTCCGCCATGTTCAGTCTTTTCTCTACGCAAGAAGCCATTAAAGGCGACGGTAGCAGTCTCTGCTTACGTAACTGGGCCAGCATCGGACCCGATTGTGGGGGAGCTCGATTTGAAGGTAAATGGGTCGGATTCTCAGACGCAGTTGCTGGGTGTAATTCATTGGGGCCTATTATGGCGGCTTTTGATGAAGCATAAGCTGAGAATGGGGATTTGCGTGTTTTCTCTCATTGGATGCACCTCTTGCACCCTTTCGATGCCTATCTTTTCGGGAAGATTTTTCGAAGTACTTATAGGAGCAAGACCAGAGCCATTGTGGAGATTACTCAGTAAGGTTGGAGTTTTGTATGCATTGGAGCCAGTATTGACAATTATCTTTGTCATAAACATGAACACGATATGGGAGAAAGTTATGTCCAGATTAAGGGCGCAGATTTTTGGAAGGTTACTCATTCAAAAGGTGAAACTAATTAGTTCTTTCACTTATCGCAATTTTCAATTTGTTGGTGAAATCACAGGTTTGTTAACTTCTGACTTGGGTTGGCTTAAAGATGTGGTGAGTGAGAATATTTCAAGAGATCGTGGATTCAGAGCACTTTCAGAGGCAAGCAACTTTACACCAAGCCCAAATACTTGGCACAATATGCATATTATATACTTTATCCCCCCAACTCGCTCCAATTTTAGGTGTGTTGATGCTCACCGTCTCAGTTTTAGTCGAAATTTTAAGGACAGTTTTTATTTGTCACATATTTCCCTTCTGATTCTTGCAGCCATGTATAAGCGTTCAACTATTCCTGTTTTTAAAGCTCATGGGTTGGCCCAAGCATCCATGGCTGACTGTGTGACAGAGACATTTTCTGCTATTCGAACTGTACGATCTTTTAGCGGTGAGAAACGTCAAATGTTAATGTTTGGGCGGCAGATTCTTGCATATCAGAGCAGTGGGATAAAGCTTGGAACTTTTAAATCTATTAACGAATCCTTAACGAGAGTTGCCATTTATATTTCTCTTCTAGCCTTGTATAGTCTCGGAGGAAGCAAAGTGAAGGCGGGCGAGCTTGCTGTTGGAACTGTAGCCTCTTTCATTGGATATACGTTCACTTTGACGTTTGCCGTTCAAGGATTAGTAAACACGTTGGGAGATCTTCGAGGAATGCTAGCTGCAGTAGAGAGAATTAATTCAATTTTGTCTGGAGTTGAAATCGATAACTCACTTGCCTATGGTTTAGAGAGAGAAATGAAGCAAAAGAAACTACCGGACGAAAAGTACGAATTGTTCTTCGCGGGTGATTCGGACGATGAAAACAAATCTCAAGAAACGTATTACATGTCTGCTCTAAAATCCGCTAGTAGTGTCAGCAATCTGGCTTGGTCTGGCGATATATGTCTTGAAGGTATATTTTGCTTTCTTTCATGCAAATTTTGCAAAGATTATAAACTAAAAAATCATTCATTCAAGTTCATTTCTCCTTCAGATGTGCACTTCTCTTATCCGTTGAGACCGGACTTGGAAATTCTTAACGGGTTAAATTTAACGATTAAATGTGGAATGATAACTGCCTTGGTCGGCCCAAGTGGGGCCGGAAAGAGTACAATAGTACAACTTTTGTCGAGATTCTACGAGCCAACTAGAGGTCATATAACAGTTAACTGCGAAGACATTCGAACATTTGACAAGACCGAATGGGCTCGGGCTGTTTCAATTGTAAATCAAGAACCTGTTCTTTTTTCGGTATCGGTCGGAGAAAATATTGCGTATGGGCTTCCAGACGACTATGTGTCCAAAGATGAAGTGATAAAGGCGGCAAAAGCTGCAAATGCTCATGAGTTCATCATTTCGCTTCCACAAGGTTATGACACGCTCGTCGGAGAACGTGGCGGTCTACTTAGCGGTGGTCAGAGGCAGAGAATCGCCATTGCTAGAGCTTTGCTTAAAAATGCACCAATTTTGATACTCGATGAGGCGACCAGTGCATTGGATGCAGTGAGCGAGCGGTTGGTCCAAGAAGCTCTAAATCATCTCATGAAAGGAAGGACAACGTTAGTCATCGCACATCGACTGAGCACAGTTCAGAATGCTCATCAGATTGCAGTAGTCTCAAACGGGAAGATTGTAGAGCTTGGGTCCCACTCGGAACTCTTGGCAAAGCAGGGCCAGTACGCAGCCTTAGTCGGCACGCAAAGGCTAGCTTTCGAGTAA 2316 43.26 TMASSVFSLPIPPISTRFRKSKWTLAFSSLTPLHQPKPVPPCSVFSLRKKPLKATVAVSAYVTGPASDPIVGELDLKVNGSDSQTQLLGVIHWGLLWRLLMKHKLRMGICVFSLIGCTSCTLSMPIFSGRFFEVLIGARPEPLWRLLSKVGVLYALEPVLTIIFVINMNTIWEKVMSRLRAQIFGRLLIQKVKLISSFTYRNFQFVGEITGLLTSDLGWLKDVVSENISRDRGFRALSEASNFTPSPNTWHNMHIIYFIPPTRSNFRCVDAHRLSFSRNFKDSFYLSHISLLILAAMYKRSTIPVFKAHGLAQASMADCVTETFSAIRTVRSFSGEKRQMLMFGRQILAYQSSGIKLGTFKSINESLTRVAIYISLLALYSLGGSKVKAGELAVGTVASFIGYTFTLTFAVQGLVNTLGDLRGMLAAVERINSILSGVEIDNSLAYGLEREMKQKKLPDEKYELFFAGDSDDENKSQETYYMSALKSASSVSNLAWSGDICLEGIFCFLSCKFCKDYKLKNHSFKFISPSDVHFSYPLRPDLEILNGLNLTIKCGMITALVGPSGAGKSTIVQLLSRFYEPTRGHITVNCEDIRTFDKTEWARAVSIVNQEPVLFSVSVGENIAYGLPDDYVSKDEVIKAAKAANAHEFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIAVVSNGKIVELGSHSELLAKQGQYAALVGTQRLAFE 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9698704 9705171 + Bpe005667.4 Bpe12g00411 112424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00411 771 ProSitePatterns ABC transporters family signature. 668 682 IPR017871 GO:0005524
Bpe12g00411 771 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 527 769 - -
Bpe12g00411 771 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 53 506 - -
Bpe12g00411 771 Pfam ABC transporter transmembrane region 291 410 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe12g00411 771 Pfam ABC transporter transmembrane region 108 229 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe12g00411 771 Gene3D ABC transporter type 1, transmembrane domain 286 497 IPR036640 GO:0005524|GO:0016021
Bpe12g00411 771 Gene3D ABC transporter type 1, transmembrane domain 87 230 IPR036640 GO:0005524|GO:0016021
Bpe12g00411 771 Gene3D - 527 768 IPR027417 -
Bpe12g00411 771 CDD ABC_MTABC3_MDL1_MDL2 530 766 - -
Bpe12g00411 771 SMART AAA_5 554 749 IPR003593 -
Bpe12g00411 771 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 527 765 IPR003439 GO:0005524
Bpe12g00411 771 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 527 769 IPR039421 -
Bpe12g00411 771 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 53 506 IPR039421 -
Bpe12g00411 771 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 109 423 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe12g00411 771 SUPERFAMILY ABC transporter transmembrane region 96 228 IPR036640 GO:0005524|GO:0016021
Bpe12g00411 771 Pfam ABC transporter 545 696 IPR003439 GO:0005524
Bpe12g00411 771 SUPERFAMILY ABC transporter transmembrane region 291 436 IPR036640 GO:0005524|GO:0016021
Bpe12g00411 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 766 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00411 Bpe-Chr12:9698704 Bpe13g00320 Bpe-Chr13:11068902 2.48E-06 dispersed
Bpe12g00411 Bpe-Chr12:9698704 Bpe02g01474 Bpe-Chr2:18038539 7.02E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00411 K05657 - fve:101303858 987.638