Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00439 ATGCCTTCATGGTGGGGAAAGTCAACAGTTAAAGAAGTGAAAAATAAAACAACCAAGGACAGTTTCATTGATTCGCTGCACCGAAAATTTAAAAGTCAATCTGACAGCAAAGTAAATAGCCGACCAGTACTGTCAAGAAGATGTGGTGCAGACATAATTTCCGAGAAGGGATCTCGATCTTCTGTGGTATCAAGATCACCTTCTCCTTCCAAACATGTTTCAAGATGTCAAAGTTTCGCTGAAAGGACTCATGCTCAACCACTTCCACTTCCTGTGAAAGAGCATAAAAATGTTGGACGGCTAGACACTGGGGTTAGAGCAACAAAGGCAAGATCTGATCGAGGTTCTAAGTTATTTCTGCCTCTCCCAAGACCAGCATGCATCCGCAGTAGGCCAAATCCCGAAGATATCGAAGGAGATTTAGTTACTGGTTCAGCATGCAGTGAGAACTCTACTGATAGTATATGTGATGATCCTAGTGAGTTGCACCATCGTAGCCCTCAGGCAACAAACGATGATTCTGGAACCAGAACAACTGCAGGTAGCCCAGCTAGGGATTGCTATTCAACTGTCACCGGACCAAATTCAAAAGATGCCAAAGAACCAATTGATCTTCTGACTGTGAATCCTGTTTCTTGCGCATCACCCAGACAAAGGCCTTTAAGTAATCATGTTCTAAATCTACAAGTTCCATGTCATGGGGTTTTCAGTGCTCCAGACAGTTACATGTCAAGTCCTGTCAGAAGTCCCATGAGAGCATTTAACACTGAGCAAGCCATTAACGCTGCTTTCTGGTCTGGGAAGGATTATCCTGATATCACTTTTACTGGCTCCGGCAATTGCTCTAGTCCTGGTTCTGGTTACAATTCTGGGCAGAATTCAATGGGAGGTGATCTTTCAGGCCAGATATTCTGGCAGCATAGCAGAGGTAGTCCTGAATATTCTCCAGTTCCTAGTCCTAAACTGGCAAGCCCTGGTCCTAGCTCAAGAATTCATAGTGGAGCTGTCACACCTATTCATTCCGGAGCAGGAGGTACTCCCCATGAGTCACAAACAAGCTACTCTGATGGGAAACGAAGTCACCGTTTACCTCTTCCTCCTATAATAATCTCAAACCCTCCCTTTTCTCAGTCAAATTCAGCTGCAACTTCTCCCTCTATGCCAAGAAGTCCAGGTAGGGGAGAGACTCCGGCTAGCCCTGGTCCACGATGGAAAAAGGGAAAGCTTCTGGGTAGGGGAACATTTGGACATGTTTACGTTGGGTTTAACAGTGAAAGTGGCGAAATGTGTGCAATGAAAGAGGTCACATTATTTTCAGACGATGCAAAATCTAAAGAAAGCGCTAAGCAATTGATGCAGGAAATTGCTTTGTTGAGCTGTTTAAGACATCCCAACATCGTGCAGTACTATGGATCTGAAGCGGTGGGTGATAAGCTCTATATATACTTGGAATATGTATCTGGTGGCTCTATCCATAAGCTTCTTCAAGAATATGGACAGTTTGGTGAACTGGCAATTCGGACTTATACTCAACAAATTTTGTCTGGCCTTGCATATTTACATTCTAAAAATACTGTACATAGAGATATCAAAGGAGCAAATATACTTGTTGATCCAAATGGCCGAGTCAAATTGGCAGACTTTGGGATGGCAAAGCATATTACTGGGCAATCATATCCTTTGTCATTCAAGGGCAGTCCTTACTGGATGGCACCGGAAGTTATAAGAAATTCAAATGGTTGTAATCTTGCTGTCGATATTTGGAGTCTTGGATGCACGGTTTTAGAGATGGTCACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCAGCCATGTTTAAGATCGGTAATGGCAAAGAACTCCCACCTATTCCAGATCATCTATCAGACGATGGTAAGGATTTTGTGAGGCAATGCTTGCGTAGGAATCCACCTCACCGTCCCTTGGCTGCTCAACTTTTGGAGCATCCGTTTGTCAAATTTTCTGCACCCCTTGAAAGACATAATTTTGGTTCTGAATTTTCAGATCCAAAGACTGCGGCTACAGGCAAAGTGAAAGCTCTGGGCATTGGACATGATCGAAATCTCTGCGCATTGGACTCGGATAGACTCGTGGATCGTTCAATTAGAGTCGTAAAACCTGGTGTCTACTTAAGTGAAATCTACATTCCAAAGAACATATCGTGCCCTGTTTCACCGACTGGAAGCCCACTTTTGCGCTCTTGTTCGCCACATCACCCAAACCCAAATGGAAGAATGTCTTCTCCTAGTTCCAGCCCCCACACAACTTCAGGTTCATCTACCCCTCTTTCGGGCTGTAATGGCACTATTTCGTACAACTCAACACTCTTCCAAGACGGCTTCAAAATCCTGCAAAAGCCAGCAAATAATGGTTTCTACACGAATGGACCTTATTTTTCAGAATCTGGCCCCAACCTCTTCAAACAACTTGCACACGGCGAAAATGATGCCCTCAAAAAGCAGTTTTTGGGCCACACCTCCCTGTATGAAGAACCGCACGATAGCCAGTCGATATTGGCCGATCGAGTGTCTCAACAGCTCCTTAGTCATCGTGTTAAAAGCAGTCCTGGCTCTCCTCTCACCAGCCGCCCGATGGGTCTATGA 2628 44.56 MPSWWGKSTVKEVKNKTTKDSFIDSLHRKFKSQSDSKVNSRPVLSRRCGADIISEKGSRSSVVSRSPSPSKHVSRCQSFAERTHAQPLPLPVKEHKNVGRLDTGVRATKARSDRGSKLFLPLPRPACIRSRPNPEDIEGDLVTGSACSENSTDSICDDPSELHHRSPQATNDDSGTRTTAGSPARDCYSTVTGPNSKDAKEPIDLLTVNPVSCASPRQRPLSNHVLNLQVPCHGVFSAPDSYMSSPVRSPMRAFNTEQAINAAFWSGKDYPDITFTGSGNCSSPGSGYNSGQNSMGGDLSGQIFWQHSRGSPEYSPVPSPKLASPGPSSRIHSGAVTPIHSGAGGTPHESQTSYSDGKRSHRLPLPPIIISNPPFSQSNSAATSPSMPRSPGRGETPASPGPRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSCLRHPNIVQYYGSEAVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRTYTQQILSGLAYLHSKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSYPLSFKGSPYWMAPEVIRNSNGCNLAVDIWSLGCTVLEMVTTKPPWSQYEGVAAMFKIGNGKELPPIPDHLSDDGKDFVRQCLRRNPPHRPLAAQLLEHPFVKFSAPLERHNFGSEFSDPKTAATGKVKALGIGHDRNLCALDSDRLVDRSIRVVKPGVYLSEIYIPKNISCPVSPTGSPLLRSCSPHHPNPNGRMSSPSSSPHTTSGSSTPLSGCNGTISYNSTLFQDGFKILQKPANNGFYTNGPYFSESGPNLFKQLAHGENDALKKQFLGHTSLYEEPHDSQSILADRVSQQLLSHRVKSSPGSPLTSRPMGL 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10156906 10161898 - Bpe005699.1 Bpe12g00439 112452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00439 875 Pfam Protein kinase domain 405 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00439 875 Gene3D Transferase(Phosphotransferase) domain 1 403 685 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 55 86 - -
Bpe12g00439 875 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 803 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 282 407 - -
Bpe12g00439 875 CDD STKc_MEKK1_plant 403 660 - -
Bpe12g00439 875 SUPERFAMILY Protein kinase-like (PK-like) 402 767 IPR011009 -
Bpe12g00439 875 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 803 - -
Bpe12g00439 875 SMART serkin_6 404 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00439 875 MobiDBLite consensus disorder prediction 741 771 - -
Bpe12g00439 875 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Bpe12g00439 875 MobiDBLite consensus disorder prediction 57 81 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 171 196 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 129 202 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 372 390 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 156 170 - -
Bpe12g00439 875 MobiDBLite consensus disorder prediction 282 313 - -
Bpe12g00439 875 ProSiteProfiles Protein kinase domain profile. 404 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00140 Bpe-Chr3:1911806 Bpe12g00439 Bpe-Chr12:10156906 2.65E-10 dispersed
Bpe03g00512 Bpe-Chr3:25060582 Bpe12g00439 Bpe-Chr12:10156906 1.80E-60 dispersed
Bpe05g00067 Bpe-Chr5:1199237 Bpe12g00439 Bpe-Chr12:10156906 7.84E-107 dispersed
Bpe06g00295 Bpe-Chr6:14077626 Bpe12g00439 Bpe-Chr12:10156906 5.93E-140 dispersed
Bpe11g00463 Bpe-Chr11:3584914 Bpe12g00439 Bpe-Chr12:10156906 4.33E-59 dispersed
Bpe12g00439 Bpe-Chr12:10156906 Bpe12g00747 Bpe-Chr12:12984004 2.01E-75 dispersed
Bpe12g00439 Bpe-Chr12:10156906 Bpe02g00081 Bpe-Chr2:608986 2.51E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63629 PF00069 Pkinase 2.00E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00439 K20717 - pop:7454524 1134.4