Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00439 | ATGCCTTCATGGTGGGGAAAGTCAACAGTTAAAGAAGTGAAAAATAAAACAACCAAGGACAGTTTCATTGATTCGCTGCACCGAAAATTTAAAAGTCAATCTGACAGCAAAGTAAATAGCCGACCAGTACTGTCAAGAAGATGTGGTGCAGACATAATTTCCGAGAAGGGATCTCGATCTTCTGTGGTATCAAGATCACCTTCTCCTTCCAAACATGTTTCAAGATGTCAAAGTTTCGCTGAAAGGACTCATGCTCAACCACTTCCACTTCCTGTGAAAGAGCATAAAAATGTTGGACGGCTAGACACTGGGGTTAGAGCAACAAAGGCAAGATCTGATCGAGGTTCTAAGTTATTTCTGCCTCTCCCAAGACCAGCATGCATCCGCAGTAGGCCAAATCCCGAAGATATCGAAGGAGATTTAGTTACTGGTTCAGCATGCAGTGAGAACTCTACTGATAGTATATGTGATGATCCTAGTGAGTTGCACCATCGTAGCCCTCAGGCAACAAACGATGATTCTGGAACCAGAACAACTGCAGGTAGCCCAGCTAGGGATTGCTATTCAACTGTCACCGGACCAAATTCAAAAGATGCCAAAGAACCAATTGATCTTCTGACTGTGAATCCTGTTTCTTGCGCATCACCCAGACAAAGGCCTTTAAGTAATCATGTTCTAAATCTACAAGTTCCATGTCATGGGGTTTTCAGTGCTCCAGACAGTTACATGTCAAGTCCTGTCAGAAGTCCCATGAGAGCATTTAACACTGAGCAAGCCATTAACGCTGCTTTCTGGTCTGGGAAGGATTATCCTGATATCACTTTTACTGGCTCCGGCAATTGCTCTAGTCCTGGTTCTGGTTACAATTCTGGGCAGAATTCAATGGGAGGTGATCTTTCAGGCCAGATATTCTGGCAGCATAGCAGAGGTAGTCCTGAATATTCTCCAGTTCCTAGTCCTAAACTGGCAAGCCCTGGTCCTAGCTCAAGAATTCATAGTGGAGCTGTCACACCTATTCATTCCGGAGCAGGAGGTACTCCCCATGAGTCACAAACAAGCTACTCTGATGGGAAACGAAGTCACCGTTTACCTCTTCCTCCTATAATAATCTCAAACCCTCCCTTTTCTCAGTCAAATTCAGCTGCAACTTCTCCCTCTATGCCAAGAAGTCCAGGTAGGGGAGAGACTCCGGCTAGCCCTGGTCCACGATGGAAAAAGGGAAAGCTTCTGGGTAGGGGAACATTTGGACATGTTTACGTTGGGTTTAACAGTGAAAGTGGCGAAATGTGTGCAATGAAAGAGGTCACATTATTTTCAGACGATGCAAAATCTAAAGAAAGCGCTAAGCAATTGATGCAGGAAATTGCTTTGTTGAGCTGTTTAAGACATCCCAACATCGTGCAGTACTATGGATCTGAAGCGGTGGGTGATAAGCTCTATATATACTTGGAATATGTATCTGGTGGCTCTATCCATAAGCTTCTTCAAGAATATGGACAGTTTGGTGAACTGGCAATTCGGACTTATACTCAACAAATTTTGTCTGGCCTTGCATATTTACATTCTAAAAATACTGTACATAGAGATATCAAAGGAGCAAATATACTTGTTGATCCAAATGGCCGAGTCAAATTGGCAGACTTTGGGATGGCAAAGCATATTACTGGGCAATCATATCCTTTGTCATTCAAGGGCAGTCCTTACTGGATGGCACCGGAAGTTATAAGAAATTCAAATGGTTGTAATCTTGCTGTCGATATTTGGAGTCTTGGATGCACGGTTTTAGAGATGGTCACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCAGCCATGTTTAAGATCGGTAATGGCAAAGAACTCCCACCTATTCCAGATCATCTATCAGACGATGGTAAGGATTTTGTGAGGCAATGCTTGCGTAGGAATCCACCTCACCGTCCCTTGGCTGCTCAACTTTTGGAGCATCCGTTTGTCAAATTTTCTGCACCCCTTGAAAGACATAATTTTGGTTCTGAATTTTCAGATCCAAAGACTGCGGCTACAGGCAAAGTGAAAGCTCTGGGCATTGGACATGATCGAAATCTCTGCGCATTGGACTCGGATAGACTCGTGGATCGTTCAATTAGAGTCGTAAAACCTGGTGTCTACTTAAGTGAAATCTACATTCCAAAGAACATATCGTGCCCTGTTTCACCGACTGGAAGCCCACTTTTGCGCTCTTGTTCGCCACATCACCCAAACCCAAATGGAAGAATGTCTTCTCCTAGTTCCAGCCCCCACACAACTTCAGGTTCATCTACCCCTCTTTCGGGCTGTAATGGCACTATTTCGTACAACTCAACACTCTTCCAAGACGGCTTCAAAATCCTGCAAAAGCCAGCAAATAATGGTTTCTACACGAATGGACCTTATTTTTCAGAATCTGGCCCCAACCTCTTCAAACAACTTGCACACGGCGAAAATGATGCCCTCAAAAAGCAGTTTTTGGGCCACACCTCCCTGTATGAAGAACCGCACGATAGCCAGTCGATATTGGCCGATCGAGTGTCTCAACAGCTCCTTAGTCATCGTGTTAAAAGCAGTCCTGGCTCTCCTCTCACCAGCCGCCCGATGGGTCTATGA | 2628 | 44.56 | MPSWWGKSTVKEVKNKTTKDSFIDSLHRKFKSQSDSKVNSRPVLSRRCGADIISEKGSRSSVVSRSPSPSKHVSRCQSFAERTHAQPLPLPVKEHKNVGRLDTGVRATKARSDRGSKLFLPLPRPACIRSRPNPEDIEGDLVTGSACSENSTDSICDDPSELHHRSPQATNDDSGTRTTAGSPARDCYSTVTGPNSKDAKEPIDLLTVNPVSCASPRQRPLSNHVLNLQVPCHGVFSAPDSYMSSPVRSPMRAFNTEQAINAAFWSGKDYPDITFTGSGNCSSPGSGYNSGQNSMGGDLSGQIFWQHSRGSPEYSPVPSPKLASPGPSSRIHSGAVTPIHSGAGGTPHESQTSYSDGKRSHRLPLPPIIISNPPFSQSNSAATSPSMPRSPGRGETPASPGPRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSCLRHPNIVQYYGSEAVGDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRTYTQQILSGLAYLHSKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSYPLSFKGSPYWMAPEVIRNSNGCNLAVDIWSLGCTVLEMVTTKPPWSQYEGVAAMFKIGNGKELPPIPDHLSDDGKDFVRQCLRRNPPHRPLAAQLLEHPFVKFSAPLERHNFGSEFSDPKTAATGKVKALGIGHDRNLCALDSDRLVDRSIRVVKPGVYLSEIYIPKNISCPVSPTGSPLLRSCSPHHPNPNGRMSSPSSSPHTTSGSSTPLSGCNGTISYNSTLFQDGFKILQKPANNGFYTNGPYFSESGPNLFKQLAHGENDALKKQFLGHTSLYEEPHDSQSILADRVSQQLLSHRVKSSPGSPLTSRPMGL | 875 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10156906 | 10161898 | - | Bpe005699.1 | Bpe12g00439 | 112452 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00439 | 875 | Pfam | Protein kinase domain | 405 | 660 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00439 | 875 | Gene3D | Transferase(Phosphotransferase) domain 1 | 403 | 685 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 55 | 86 | - | - | |
Bpe12g00439 | 875 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA | 1 | 803 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 282 | 407 | - | - | |
Bpe12g00439 | 875 | CDD | STKc_MEKK1_plant | 403 | 660 | - | - | |
Bpe12g00439 | 875 | SUPERFAMILY | Protein kinase-like (PK-like) | 402 | 767 | IPR011009 | - | |
Bpe12g00439 | 875 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 803 | - | - | |
Bpe12g00439 | 875 | SMART | serkin_6 | 404 | 660 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 741 | 771 | - | - | |
Bpe12g00439 | 875 | ProSitePatterns | Protein kinases ATP-binding region signature. | 410 | 433 | IPR017441 | GO:0005524 | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 57 | 81 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 171 | 196 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 129 | 202 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 372 | 390 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 156 | 170 | - | - | |
Bpe12g00439 | 875 | MobiDBLite | consensus disorder prediction | 282 | 313 | - | - | |
Bpe12g00439 | 875 | ProSiteProfiles | Protein kinase domain profile. | 404 | 660 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00140 | Bpe-Chr3:1911806 | Bpe12g00439 | Bpe-Chr12:10156906 | 2.65E-10 | dispersed | |
Bpe03g00512 | Bpe-Chr3:25060582 | Bpe12g00439 | Bpe-Chr12:10156906 | 1.80E-60 | dispersed | |
Bpe05g00067 | Bpe-Chr5:1199237 | Bpe12g00439 | Bpe-Chr12:10156906 | 7.84E-107 | dispersed | |
Bpe06g00295 | Bpe-Chr6:14077626 | Bpe12g00439 | Bpe-Chr12:10156906 | 5.93E-140 | dispersed | |
Bpe11g00463 | Bpe-Chr11:3584914 | Bpe12g00439 | Bpe-Chr12:10156906 | 4.33E-59 | dispersed | |
Bpe12g00439 | Bpe-Chr12:10156906 | Bpe12g00747 | Bpe-Chr12:12984004 | 2.01E-75 | dispersed | |
Bpe12g00439 | Bpe-Chr12:10156906 | Bpe02g00081 | Bpe-Chr2:608986 | 2.51E-79 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63629 | PF00069 | Pkinase | 2.00E-71 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00439 | K20717 | - | pop:7454524 | 1134.4 |