Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00441 ATGTTTATAGCTCTTCTGCTCTGGTCTTTCACTTCCTATTTGCATGGAATGTGGGAAAATAGGGTAGAAAATACAGGAATGTTGCTGGGTCTGGTCGGCAATATTAGTCTGAGTTTTCTGTTCTTCCCGGTGGCGAGAGGATCTTCAATTCTGCAACTCGTTGGACTCACCTCGGAATCTACCATTAAATATCACATTTGGCTTGCTCATAGTACCTTGATCCTCTTCACTTGTCATAGTATCTCTTACATCATAGTTTGGCTCAGAACTAATAAACTTTCCCGCGAAGTAGCCTTGTGGATTCTTTTTCTTGGAAACCTTACAAGATTTTACATATACCCAGCTGATAAAATTTCAAAACCTGCCATTTCCGACCCCTTGAAAGATGCTTTGAGCATGCTGTGCGTAGTTTCCGCCGTTTTTGTGTCTGCAACTGCAGCTTTTATGTGGAAGAAGAAAGAGATGATGAATGAAAAATGGTTTGAAAATGGAGAAGGAGAGCTGGAAATCTTTCCTGACGCGTCTTTGGTCAAAGCTATTCAAGTTCATTATGGTCAAAGACCTAATTTCAAAAGAATGTTGACAGAATGTGGAAAATCAAGAACAGGAGTTCTGGTCAGTGGGCCAAGGAAGATGAGGCAACAAGTGGCTGAGCTTTGTTCCTCCAACCTTTTTCATCACTTGCACTTTGAATCCATATGTTTCACTTGGTCATTAAATTAA 723 40.53 MFIALLLWSFTSYLHGMWENRVENTGMLLGLVGNISLSFLFFPVARGSSILQLVGLTSESTIKYHIWLAHSTLILFTCHSISYIIVWLRTNKLSREVALWILFLGNLTRFYIYPADKISKPAISDPLKDALSMLCVVSAVFVSATAAFMWKKKEMMNEKWFENGEGELEIFPDASLVKAIQVHYGQRPNFKRMLTECGKSRTGVLVSGPRKMRQQVAELCSSNLFHHLHFESICFTWSLN 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10168932 10177904 - Bpe005701.1 Bpe12g00441 112454

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00441 240 PANTHER NADPH OXIDASE 97 236 - -
Bpe12g00441 240 PANTHER NADPH OXIDASE 1 95 - -
Bpe12g00441 240 Pfam Ferric reductase like transmembrane component 29 148 IPR013130 -
Bpe12g00441 240 Gene3D - 141 236 IPR039261 -
Bpe12g00441 240 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 97 236 - -
Bpe12g00441 240 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 1 95 - -
Bpe12g00441 240 Pfam Ferric reductase NAD binding domain 175 221 IPR013121 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00441 K00521 E1.16.1.7; ferric-chelate reductase [EC:1.16.1.7] - vvi:100252447 139.813
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe03g00148 Bpe12g00441 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00007 Bpe-Chr12:87448 Bpe12g00441 Bpe-Chr12:10168932 2.60E-29 dispersed
Bpe12g00441 Bpe-Chr12:10168932 Bpe15g00961 Bpe-Chr15:19261809 1.09E-28 dispersed
Bpe12g00441 Bpe-Chr12:10168932 Bpe03g00270 Bpe-Chr3:3718359 9.00E-24 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g745 . . . . Bpe03g00148 . . Bma14g02049 Cmo16g00114 . . . . . Sed08g0079 . Cpe14g00091 Bhi01g01266 Tan01g0209 Cmetu10g1511 . Hepe07g0132 Mch10g0135 . . . . . . . . Cone1ag1183 . . . Lsi05g01204 . . . Blo07g00388 . . . . Bpe12g00441 . . . . . Cma16g00106 . . . . . . . . . . . . . . . . . . . . Csa03g01738 Chy06g00969 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024476 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe12g00441 Bpe_Chr12 FPKM 1.117082 1.241519 0.0 0.0 6.117891 6.363682 5.694582 5.618489 4.972214 4.467223