Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00460 ATGAAAACATCAAGTTTGAAATTATTTTCTGTTGGATTGAAGAAGAGCGAATTCCCGGCTTTGAGGACCTCTCGCCTCCAAGTTTGTTGTGCAGCAAAACCCGAGACAGTTGATAAAGTCTGCGCAATTGTGAGGAAACAACTGGCTTTGCCTCCAGAATCAGAGCTCACTCCTGAATCCACATTTTCCTCGCTCGGTGCCGATTCACTCGACACATTGTTATATCTGTTGGGGGACATCACTGCTGGGCCTGCTTATAGTTTCACTCAATGGGTGGAGTTGGTCCGTAAACGCAGTGGCAAATTTCGGTCCTCTGGCTTTCCGAATCGCCCTCCAGGGCTCCATTCTCCTTTCAGTGCAGGAGAACTAGTTGATGATTCAGATAGTCCTCAACTGCCTGAGCAAAGTACAGAACCCAGTTTATGGGAAAGACTTGGAAAAGCTTCTGTCTTGGATGTTGAGTCGACTACTTTTTGTTGGGACATTCTTTCATCTCTTCACCACACTGAACATAGCAGTGGCACTGAACAGCCTGAAGAAGAAAGCAGCAAGGTTCTTGAGGTCACTGTGAATTCCGGGGGAGTTGTTTTCTTTGCCTTATTTAATACGTTAGGTGATGATAGTGTTCTCCCGATGGAAGCGACTGCTGTAATAAAGATATCATCATCCAGAATGGTTACACAATCTGAACGTCTTGGATATGAAATCGCAAAGTGGTTGGGAGTTCGAACTCCACTGGCTAGGGTAATTCATAATTCTAGCCCGGAGTGGCTGCATATAAAAGAAGCCACGGAGAGAGTACGAGTCCTAGCTTGTTCACAAGGTGATGAAGCTGGTGAAATGACATCTTCTGAACTTTTAGAAGCTCTTGAACTTAGCAAATGTCTTTTATTAATGAGTTATGTGCATGGATCTCCTTTGTTAGAAAGCACAAGCGCATTTGAATCAAAGAAAACCACTGCAAAAATAGCAGCTGCTCTTGGTAGAGTTTTGATGTTGGATCTTATTATCAGAAATGAAGATAGACTCCCTTGTAGTCCTCTAAGATGGCGTGGTAATTCTGCAAATTTATTGTTGGTTTATAAAATGGTTCATGAAAGTGTTGATCCGCTGGAAGAGGCCATAAATTCTGAAGTCAAGAAATACAAACCTAGGGTGATTAAAGCTTTTGAAAAAGAAAGAAGAGCAATATCTATTGATAGTAGATTAAGTTTTTCTGACTCTGGGTGTCTATCAAATGCGTCTCATCTTTCCGATTTTGTTGAAAAAACTCAAACTTCAAATGGATCGATGCTATCAGATTTTCATATTGTGGCTATTGATTCTGGTGTTCCTCGCCGACCTCCAAGTGGAAAACGTGCAAATGACCAAGCCATTTATCCAAAGTTTGTTGAATTACTACTGAACAGTTTTGAGTACTCCTCTGATGTTCTACATGCCATTACAGGAGGAAAATTAGGATTTCCTTCACCAGAAGATTCCCCCACAGATAGGGATTCATGGCCAGTGGAAATAACTTCAGATGTTCATGAATTTCGTTGTGGATTCCGTGCAGCTCTTAGGGACATGCAGGGTTTCCACATATTTTTCCTTACCCTACACCAAAAATTGGAAAATTCATTAAGGGCATTTGATGTTATCATGAATAAACTTTCAGCGGAATCTGATAAAGAAGATTTGGGAATCTCTGAGTTTTCCTCACAGTCTGCTGGAGGTGCTTATTCCCGCTCTTCCGATGGTAAAGAGAAGATTTCTAATGATAACCATACTGATTGTTGTGATTCAGAAATTCAAAGATCTGGTCCAAGGTCATTAGCCTCTGGGAAGAAAGAAAATTCTGATTCATCTCCTCCACTTTCTCGTGACAATTGGCCAAGAAAGTCTTACAAAGGAAGTGGCGATGATATCCGTAACTTTCGTTTAACAGGAAAGCTCAGAGACATCCACAAATTTGCAAAGGTGGATGCTGAATTGAGCAAGGAAATGGAACAATGGACTGAAATATTGAAAAATGATGTTGTCAAACTCTGTCAGGAGAACAATTTTAACACTGGATTTTTTGAGGGTAGCGATAATAATATCGTTGTTGATGCATATGAATTAAAGTTACGACTTGAGCACATTCTTGAGAGAATTGCTCTAATATCTGAGGCTGCAAATACAGAGAGACCTTCTTTGATTACTAGCTCACTATTCATAGGGGGTGCGTTGGCTGCTAGATCTGTGTACACACTGCAGCATTTAGGAATTTCGCATATTTTGTGTTTGTGCGCTAATGAATTTGGACATGTAGATTCTCAGTTTCCAGATATGTTCCAGTATAAAAATTTCTCTATATGTGACTCTGAAGACTCTAATATCAGAGCAATATTTGACGAAACTTCAGACTTTATTGATCATGTTGAACAAATTGGCGGCAAGGTTCTAGTCCACTGCTTTGAAGGAAAAAGTAGAAGCTCTACGGTTGTGCTTGCATACTTGATGCTCAAGAAGAACTTGTCTCTATTGGAAGCATGGGATGGCTTGAAACGAATTCACCGCCGAGCCCAGCCAAACGATGGGTTTGCGAGAATTCTATTAGAGCTAGACAAGAAACTTCACGGAAAGTTTTCTATGGAGTGGCAACAGAGGAAGCCGACGATGAAGGTTTGCCCAATATGCGGTAAGAATGTCGGTCTGAGCAGCAGCTCACTTAAGCTTCATGTGCAGAAATCACACAAGAAGCTGTCATCAGGTAGCGTGGATAGTGCTATGACAATGGAGATACAAAAAGCTTTGGCTGCTCTTCAAATTAGCCGTGGGGGAAGTGTCAGTCCAACTCTGAGGCAGTCTAATTTGGTATTTGATTGA 2850 41.26 MKTSSLKLFSVGLKKSEFPALRTSRLQVCCAAKPETVDKVCAIVRKQLALPPESELTPESTFSSLGADSLDTLLYLLGDITAGPAYSFTQWVELVRKRSGKFRSSGFPNRPPGLHSPFSAGELVDDSDSPQLPEQSTEPSLWERLGKASVLDVESTTFCWDILSSLHHTEHSSGTEQPEEESSKVLEVTVNSGGVVFFALFNTLGDDSVLPMEATAVIKISSSRMVTQSERLGYEIAKWLGVRTPLARVIHNSSPEWLHIKEATERVRVLACSQGDEAGEMTSSELLEALELSKCLLLMSYVHGSPLLESTSAFESKKTTAKIAAALGRVLMLDLIIRNEDRLPCSPLRWRGNSANLLLVYKMVHESVDPLEEAINSEVKKYKPRVIKAFEKERRAISIDSRLSFSDSGCLSNASHLSDFVEKTQTSNGSMLSDFHIVAIDSGVPRRPPSGKRANDQAIYPKFVELLLNSFEYSSDVLHAITGGKLGFPSPEDSPTDRDSWPVEITSDVHEFRCGFRAALRDMQGFHIFFLTLHQKLENSLRAFDVIMNKLSAESDKEDLGISEFSSQSAGGAYSRSSDGKEKISNDNHTDCCDSEIQRSGPRSLASGKKENSDSSPPLSRDNWPRKSYKGSGDDIRNFRLTGKLRDIHKFAKVDAELSKEMEQWTEILKNDVVKLCQENNFNTGFFEGSDNNIVVDAYELKLRLEHILERIALISEAANTERPSLITSSLFIGGALAARSVYTLQHLGISHILCLCANEFGHVDSQFPDMFQYKNFSICDSEDSNIRAIFDETSDFIDHVEQIGGKVLVHCFEGKSRSSTVVLAYLMLKKNLSLLEAWDGLKRIHRRAQPNDGFARILLELDKKLHGKFSMEWQQRKPTMKVCPICGKNVGLSSSSLKLHVQKSHKKLSSGSVDSAMTMEIQKALAALQISRGGSVSPTLRQSNLVFD 949
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10343710 10354371 - Bpe005720.1 Bpe12g00460 112473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00460 949 ProSiteProfiles Dual specificity protein phosphatase domain profile. 723 868 IPR020422 GO:0006470|GO:0008138
Bpe12g00460 949 MobiDBLite consensus disorder prediction 562 629 - -
Bpe12g00460 949 Pfam Actin-fragmin kinase, catalytic 138 444 IPR015275 -
Bpe12g00460 949 Gene3D Protein tyrosine phosphatase superfamily 706 878 IPR029021 -
Bpe12g00460 949 SUPERFAMILY Protein kinase-like (PK-like) 90 458 IPR011009 -
Bpe12g00460 949 MobiDBLite consensus disorder prediction 580 596 - -
Bpe12g00460 949 ProSitePatterns Tyrosine specific protein phosphatases active site. 810 820 IPR016130 GO:0016311|GO:0016791
Bpe12g00460 949 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 788 844 IPR000387 GO:0016311|GO:0016791
Bpe12g00460 949 Gene3D - 32 78 IPR036736 -
Bpe12g00460 949 Pfam Dual specificity phosphatase, catalytic domain 739 864 IPR000340 GO:0008138|GO:0016311
Bpe12g00460 949 SMART dsp_5 723 865 IPR020422 GO:0006470|GO:0008138
Bpe12g00460 949 MobiDBLite consensus disorder prediction 103 139 - -
Bpe12g00460 949 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 71 948 - -
Bpe12g00460 949 Gene3D - 306 470 IPR036940 GO:0016301
Bpe12g00460 949 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 723 868 IPR029021 -
Bpe12g00460 949 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 71 948 IPR035010 GO:0004721|GO:0009737|GO:0043622
Bpe12g00460 949 CDD DSP 724 861 - -
Bpe12g00460 949 MobiDBLite consensus disorder prediction 597 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01185 Bpe-Chr4:13571777 Bpe12g00460 Bpe-Chr12:10343710 2.24E-26 dispersed
Bpe04g01698 Bpe-Chr4:22896576 Bpe12g00460 Bpe-Chr12:10343710 1.61E-18 dispersed
Bpe10g00796 Bpe-Chr10:14106451 Bpe12g00460 Bpe-Chr12:10343710 4.67E-15 dispersed
Bpe12g00460 Bpe-Chr12:10343710 Bpe14g01151 Bpe-Chr14:8576897 4.20E-13 dispersed
Bpe12g00460 Bpe-Chr12:10343710 Bpe13g00646 Bpe-Chr13:13310984 6.85E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00460 K14165 - cit:102630871 1203.73