Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00478 ATGGTGCTTCAATTGGGCGAAAAATTGAGGGATTTCGCGAACAACAGATGGCTGGTTTTTGTGTGCGCAATGTGGATTCAATCGTGTGCAGGGATTGGGTACTTGTTCGGGAGTATTTCGCCGGTGATTAAGAGCAGGATGGGGTATAACCAGAGGCAGATTGCGATGTTGGGCGTCGCTAAGGATTTGGGAGACAGCGTCGGGTTTTTGGCCGGGAGCTTGAGTGAGGTTCTGCCCGTTTGGGGGGTTTCTCTGATTGGGGCGATTCATAATTTCTTTGGGTATGGTTTGGTTTGGCTCATCATTACTCGTCGTCTCCCTTCTCTGCCTCTCTGGGTGCTCTGTATTGCTATATATGTCGGGACAAATGGAGAGACTTTCTTCAACACAGCAGCATTAGTTTCATGCATTCAGAACTTCCCCAAGAGTCGGGGTCCAATAGTTGGGATCTTAAAAGGATTTGCTGGGTTGAGTGGCGCAATCTTGATGCAAATTTATGCAATGATCAACTCGCCAGATCAAGCATCGTTGTTATTCATGGTTGCCATTGGGCCAACAATGGTTGCAATTGCACTAATGTTCATCGTTCGACCGGTCGGAGGTCACAAGCAAGTCAGACCTTCAGATGGATCGAGCTTTTTATTCACTTACATCATTTGTCTCCTCCTGGCCGCATATATGATGGGAGTTTTGCTTCTTCAGGATTTGTTTCATCTGAATCAAAAAGTAGTCACATTATTATCGATAGTTTTGATTGTTCTTATTTTCATTCCGGTCGTTATTCCAATTATTCTGGTCTTCTTTACACAATCGACGCCTCCGGAAGAGGAGAGCCTTATTCCAGAGTTGCAGAAGGAGAAAGATGATAACTCCAACTCCCATGAAAATGAGATTGTTCTTAGTGAGGTCGAAGATGAAAAATCGTCGGAAGTTGATTTACTCTCATCGTTAGAAAGACACAAGAGGATGGCTCAATTGCAGGCTAAACTGGTTCAAGCGGCTGCAGAAGGAGCAGTGAGGATCAAAGGACGGTCGCGAAAGGGCCCACGAAGAGGCGAAGATTTCACCTTATTGCAGGCGTTAAGAAAGGCCGACTTCTGGCTTCTCTTCTTCTCCCTTTTATTGGCATCTGGTTCAGGTTTAACAATCATCGATAATCTGGGTCAGATCGTTCAATCACTCGGATATTCCACCGATAGAAGCATTTATGTATCAATGATCAGCATCTGGAACTTTCTTGGCCGCGTCGGCGGAGGCTACTTCTCTGAGATCATCGTAAGAAAATATGCATATCCAAGGCAAGCTGCAATGGCTGTTTTCCAACTCATGATGGCATTTGGGCTGTTATACTACTCGATTGGACTGCCGGGTGAGATTTACGTAATCACTGTTCTGACCGGCCTGGGCTACGGTGCCCACTGGGCTATTCTTCCGGCTGCCGCCTCCGAGCTGTTCGGCCTGAAAAGCTTCGGAGCCTTATACAACTTTTTGACTATAGCTAATCCTGCAGGCTCTCTCATATTCTCAGGAGCCATAGCCAGTGGAATATATGATCATTATGCAGAGCAACAATCACATAATGTGGGTGGATTGAATGAAAAATCGCTCATTTGTAAAGGGTTGATTTGCTATTCCCTCACTTGCGCCATTTTATCGGGAATTTGCGTAGTTGCCGCTATGTTGAGTTTGATTGTCGTTTACCGGACGAAGAGGGTTTACACTCAACTCTACGGAAAGCTTCACAATTGA 1749 45.63 MVLQLGEKLRDFANNRWLVFVCAMWIQSCAGIGYLFGSISPVIKSRMGYNQRQIAMLGVAKDLGDSVGFLAGSLSEVLPVWGVSLIGAIHNFFGYGLVWLIITRRLPSLPLWVLCIAIYVGTNGETFFNTAALVSCIQNFPKSRGPIVGILKGFAGLSGAILMQIYAMINSPDQASLLFMVAIGPTMVAIALMFIVRPVGGHKQVRPSDGSSFLFTYIICLLLAAYMMGVLLLQDLFHLNQKVVTLLSIVLIVLIFIPVVIPIILVFFTQSTPPEEESLIPELQKEKDDNSNSHENEIVLSEVEDEKSSEVDLLSSLERHKRMAQLQAKLVQAAAEGAVRIKGRSRKGPRRGEDFTLLQALRKADFWLLFFSLLLASGSGLTIIDNLGQIVQSLGYSTDRSIYVSMISIWNFLGRVGGGYFSEIIVRKYAYPRQAAMAVFQLMMAFGLLYYSIGLPGEIYVITVLTGLGYGAHWAILPAAASELFGLKSFGALYNFLTIANPAGSLIFSGAIASGIYDHYAEQQSHNVGGLNEKSLICKGLICYSLTCAILSGICVVAAMLSLIVVYRTKRVYTQLYGKLHN 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10548838 10551255 + Bpe005740.1 Bpe12g00478 112491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00478 582 SUPERFAMILY MFS general substrate transporter 213 571 IPR036259 -
Bpe12g00478 582 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 579 - -
Bpe12g00478 582 Pfam Nodulin-like 16 263 IPR010658 -
Bpe12g00478 582 SUPERFAMILY MFS general substrate transporter 9 198 IPR036259 -
Bpe12g00478 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 579 - -
Bpe12g00478 582 CDD MFS_Mch1p_like 16 559 - -
Bpe12g00478 582 Gene3D MFS general substrate transporter like domains 335 563 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00214 Bpe-Chr1:1324768 Bpe12g00478 Bpe-Chr12:10548838 1.54E-98 dispersed
Bpe04g01899 Bpe-Chr4:23981310 Bpe12g00478 Bpe-Chr12:10548838 1.25E-100 dispersed
Bpe09g00432 Bpe-Chr9:10433887 Bpe12g00478 Bpe-Chr12:10548838 5.93E-106 dispersed
Bpe12g00478 Bpe-Chr12:10548838 Bpe15g01047 Bpe-Chr15:19813645 4.37E-93 dispersed
Bpe12g00478 Bpe-Chr12:10548838 Bpe07g00721 Bpe-Chr7:13776673 8.07E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00478 - - jre:108996253 816.609