Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00503 ATGGAGCCTATGGATATAGTGGGAAAGTCGAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACGAAAATCATCAAGGAGATGTTGCCGCCGGATGTACGAGTCGCAAGAGATGCTCAAGATCTTTTAATCGAGTGTTGTGTAGAGTTTATAAATCTAGTATCATCGGAGTCTAATGAAGTATGCAACAGGGAAGATAAAAGAACGATTGCGCCTGAACATGTACTCAAGGCATTAGAGTTACTTGGTTTTAGCGAGTACATCGAAGAAGTCTATTCCGCATATGAACAGCACAAGCTCGAGACCATGCAAGACTCCTTGAAGGGTGGAAAGTGGAGCAATGGAGCTGAGATGACGGAGGAGGAGGCCCTGCTGGAGCAGCAGAGAATGTTTGCCGAGGCTCGAGCAAGAATGAACGGCGGGGCCACAGCTCCAAAGCAAGCAGAGGGTGATCAAAGTTTAGAGAGCTAA 471 47.13 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALELLGFSEYIEEVYSAYEQHKLETMQDSLKGGKWSNGAEMTEEEALLEQQRMFAEARARMNGGATAPKQAEGDQSLES 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10867718 10872634 - Bpe005766.1 Bpe12g00503 112516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00503 156 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
Bpe12g00503 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Bpe12g00503 156 MobiDBLite consensus disorder prediction 135 156 - -
Bpe12g00503 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 - -
Bpe12g00503 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Bpe12g00503 156 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00503 Bpe15g00553 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00503 Bpe-Chr12:10867718 Bpe04g01866 Bpe-Chr4:23814893 6.35E-18 dispersed
Bpe12g00503 Bpe-Chr12:10867718 Bpe15g00553 Bpe-Chr15:16595219 4.97E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22203 PF00808 CBFD_NFYB_HMF 3.90E-22 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00503 K21751 - tcc:18604965 288.115