Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00503 | ATGGAGCCTATGGATATAGTGGGAAAGTCGAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACGAAAATCATCAAGGAGATGTTGCCGCCGGATGTACGAGTCGCAAGAGATGCTCAAGATCTTTTAATCGAGTGTTGTGTAGAGTTTATAAATCTAGTATCATCGGAGTCTAATGAAGTATGCAACAGGGAAGATAAAAGAACGATTGCGCCTGAACATGTACTCAAGGCATTAGAGTTACTTGGTTTTAGCGAGTACATCGAAGAAGTCTATTCCGCATATGAACAGCACAAGCTCGAGACCATGCAAGACTCCTTGAAGGGTGGAAAGTGGAGCAATGGAGCTGAGATGACGGAGGAGGAGGCCCTGCTGGAGCAGCAGAGAATGTTTGCCGAGGCTCGAGCAAGAATGAACGGCGGGGCCACAGCTCCAAAGCAAGCAGAGGGTGATCAAAGTTTAGAGAGCTAA | 471 | 47.13 | MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALELLGFSEYIEEVYSAYEQHKLETMQDSLKGGKWSNGAEMTEEEALLEQQRMFAEARARMNGGATAPKQAEGDQSLES | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10867718 | 10872634 | - | Bpe005766.1 | Bpe12g00503 | 112516 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00503 | 156 | SUPERFAMILY | Histone-fold | 12 | 142 | IPR009072 | GO:0046982 | |
Bpe12g00503 | 156 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 14 | 79 | IPR003958 | - | |
Bpe12g00503 | 156 | MobiDBLite | consensus disorder prediction | 135 | 156 | - | - | |
Bpe12g00503 | 156 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 155 | - | - | |
Bpe12g00503 | 156 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 155 | IPR044255 | - | |
Bpe12g00503 | 156 | Gene3D | Histone, subunit A | 4 | 144 | IPR009072 | GO:0046982 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe12g00503 | Bpe15g00553 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe12g00503 | Bpe-Chr12:10867718 | Bpe04g01866 | Bpe-Chr4:23814893 | 6.35E-18 | dispersed | |
Bpe12g00503 | Bpe-Chr12:10867718 | Bpe15g00553 | Bpe-Chr15:16595219 | 4.97E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22203 | PF00808 | CBFD_NFYB_HMF | 3.90E-22 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00503 | K21751 | - | tcc:18604965 | 288.115 |