Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00515 ATGGGTTGGGCAATAGCTCTACACGGTGGCGCCGGCGATATTCCGCAATCATTGCCGCCCGACCGCCGGTTACCGCGCGAGGAAGCCCTTCGCCACTGTCTTCAGATTGGAGTCGAAGCTCTCGAAGCCCAAAAGTCTCCGTTGGATGTCGTTGAACTCGTGGTTAGGGAGCTGGAAAATAACCCGCATTATAATGCCGGTAGAGGTTCTGTCTTGACCACCGATGGAGCAGTAGAAATGGAAGCTAGTATCATGGATGGTATGACAAAGAGATGTGGAGCTGTTTCTGGACTTACCACGGTTGTTAATGCTGTGTCTCTGGCAAGACTGGTAATGGAGAAGACTCCTCATATTTATCTTGGATTTGCTGGAGCTGAGGCTTTTGCTAGACAACAAGGGGTTGAGACCGTAGACCCTAGTTACTTTATCACTCCACTGAATATTGAACGCCTACAGCAGGCAAAAGAGGCCAACAGAGTGCAGGTAAATGCCTTTATTTCAATCTTAATCCAAACCTCTTGCTCTTCTTTTGACGAACAGATAGATTACACACAACCAACTTCTCGAGATCTTAAAATTGAAGCACAAGTTGCCTCCGGCGATAGTCAAATTGGGACGGTCGGGTGTGTGGCTGTCGATAGTCAAGGGAATTTGGCAGCAGCAACTTCTACGGGCGGATTAGTGAACAAAATGGCCGGTAGAATTGGCGACACACCCATTATAGGAGCCGGGACGTATGCCAACAATCTTTGTGCAGTGTCTGCTACGGGCATAGGCGAAGCTATTATCCGAGGTACGGTTGCAAGAGATGTCGCGGCTCTAATGGAGTTCAAATCTCTGTCTCTCAAGGAAGCAGCTGCTTATGTTGTGAAGCAGAGTGTTCCGAAAGGCAGTGTCGGTTTAGTTGCTGTATCTGCGACCGGAGAAGTCGCCATGCCTTTTAACACAACTGGTATGTTCAGGGCTTGTGCCACTGAAGATGGATTTTCAGAAATAGCCATTTGGCCTTCTCTTTATAATTGA 1023 48.19 MGWAIALHGGAGDIPQSLPPDRRLPREEALRHCLQIGVEALEAQKSPLDVVELVVRELENNPHYNAGRGSVLTTDGAVEMEASIMDGMTKRCGAVSGLTTVVNAVSLARLVMEKTPHIYLGFAGAEAFARQQGVETVDPSYFITPLNIERLQQAKEANRVQVNAFISILIQTSCSSFDEQIDYTQPTSRDLKIEAQVASGDSQIGTVGCVAVDSQGNLAAATSTGGLVNKMAGRIGDTPIIGAGTYANNLCAVSATGIGEAIIRGTVARDVAALMEFKSLSLKEAAAYVVKQSVPKGSVGLVAVSATGEVAMPFNTTGMFRACATEDGFSEIAIWPSLYN 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11005053 11006791 + Bpe005778.2 Bpe12g00515 112528

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00515 340 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 335 IPR029055 -
Bpe12g00515 340 Pfam Asparaginase 3 335 IPR000246 GO:0016787
Bpe12g00515 340 Gene3D (Glycosyl)asparaginase 206 338 - -
Bpe12g00515 340 CDD Asparaginase_2 4 328 - -
Bpe12g00515 340 PANTHER L-ASPARAGINASE 1 180 IPR000246 GO:0016787
Bpe12g00515 340 PANTHER L-ASPARAGINASE 178 335 IPR000246 GO:0016787
Bpe12g00515 340 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 180 - -
Bpe12g00515 340 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 178 335 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00515 K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] - qsu:112028955 509.605
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00991 Bpe-Chr7:15615973 Bpe12g00515 Bpe-Chr12:11005053 3.78E-16 dispersed
Bpe12g00515 Bpe-Chr12:11005053 Bpe13g00934 Bpe-Chr13:15249797 6.46E-22 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g428 . . . Bda15g00633 Bpe12g00515 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma08g00251 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012222 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe12g00515 Bpe_Chr12 FPKM 0.234973 0.0 0.0 0.163527 1.585544 2.727896 1.743714 0.0 0.0 0.0