Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00521 ATGAATTCAAAGGAAAAAGGCTTAAAAGCAAGGGAAGAGGGAGAGACCACCACAAACGAGTGGAAATTACCCAAGTTGTCGGCATCGAGTTCAAGATCATGGTCGGGATCGAGAAATCCGAGGATTGTGCGAGTTTCTCGAACGTTTGGAGGGAAAGATAGACATAGTAAAGTTTGTACAATCCGAGGATTGAGAGATAGGAGGATCAGACTTTCAGTTCCAACTGCAATTCAACTATATGATCTTCAAGATAGACTTGGTGTTAATCAACCAAGCAAGGTAATCGATTGGTTGCTTACCGTCACAAAGCTTGATATCGATAAGCTCCCTCCGCTCCAACTGTCTCCCGGATTCGGTCAATTCGACCGGGAAATTTTGGCTTCTCAAGATCATTCAGGTTCGAATTTTACCTACCGGCGTGAGACTTTTGTTATGTTGATGCACGAATCAAAACAATATCATCTACTTGAATTCTAA 477 42.35 MNSKEKGLKAREEGETTTNEWKLPKLSASSSRSWSGSRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGVNQPSKVIDWLLTVTKLDIDKLPPLQLSPGFGQFDREILASQDHSGSNFTYRRETFVMLMHESKQYHLLEF 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11089125 11089601 - Bpe005784.1 Bpe12g00521 112534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00521 158 MobiDBLite consensus disorder prediction 1 19 - -
Bpe12g00521 158 Pfam TCP family transcription factor 51 115 IPR017887 -
Bpe12g00521 158 PANTHER TRANSCRIPTION FACTOR TCP17 2 137 - -
Bpe12g00521 158 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Bpe12g00521 158 MobiDBLite consensus disorder prediction 1 39 - -
Bpe12g00521 158 MobiDBLite consensus disorder prediction 20 39 - -
Bpe12g00521 158 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 137 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00521 Bpe15g00574 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00521 Bpe-Chr12:11089125 Bpe13g00324 Bpe-Chr13:11101391 3.65E-57 dispersed
Bpe12g00521 Bpe-Chr12:11089125 Bpe15g00574 Bpe-Chr15:16742038 6.38E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22206 PF03634 TCP 2.60E-25 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00521 - - rcu:8263441 186.808