Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00551 ATGGAAGGAGGAGATGAGCTCCACCACCACCACCACCGCCATCTCCACCACCACAACCGCCCAACCTTCCCCTTTCAATTACTAGAAAAGAAAGACGACGAAGCTTCCTGCTCCAGCTCCGGATACCCTTCTCTTGCCATTTCCGCAGATCCAGCCACCTCTTCCTCCCGTTTACAGGCCACCCCCTCCACGTCGGCAGAGCCGTCCAAGAAGCCTCCGCCCAAAAGAACATCGACGAAGGACCGCCACACCAAGGTCGACGGCCGTGGCCGGCGCATCAGAATGCCTGCTCTTTGCGCAGCAAGAGTTTTCCAGCTAACCCGCGAGCTGGGCCACAAGTCCGATGGAGAGACCATCGAGTGGCTCCTCCAACAGGCGGAGCCAGCCGTGATCGCCGCTACCGGCACTGGAACAATACCAGCGAACTTCGCTTCACTTAATATATCATTAAGAAGCTCCGGGTCAAGCATGTCCGTTCCATCTCAGCTTAGATCATCTTCCTACTATAATCCGAATTTCTCTCTTCAGCAACCGAGAAAAAGTCTTTTTCCGGGAATAGGTTTGTCGCCGGAAAATACATCCACGTTATTGAATTTTCAGTCCAGTAGTATGGGTTCTATGCTGCATGCAAAGCAAGAACTGAGAGATACTTCACTGGAGGTATCTGAGGGGGATGAAGGCATAGGCCGGAAAAGAAGACATGACCAAGATTTGTTGTCTCAACATCAAATGGGAAGCTATTTATTGCAATCAAGTCCCGGAACAATTCCGGCTACACATGGGGCTCAAATTCCAGCCAATTTTTGGATGCTTACTAATACAAATAACCAAGTGATGGGTGGCGACCCAATTTGGACATTTCCTTCCGTTAGTAATAGCGCTTTGTATAGGGGGACCATGTCTAGTGGGTTACATTTCATGAATTTTCCGGCCCCGATGACCTTATTGCCCGGTCAACAATTAGGGTCGGTCATCGGGATTGGCAGCGGCGGTAGCAGTGGTGCCAGCGACGGACATTTAAATATGATGACGGGGCTGAACCCGTATAGATCCATGCAGAATTCGAGTGTGTTGGAATCTGCCGGGACTGGTTCCCACTCACACCATGGTGGCGGCAGTAGCGACAGAGGTGACGATCGACATGACTCAACAACCAACAATTAG 1164 51.12 MEGGDELHHHHHRHLHHHNRPTFPFQLLEKKDDEASCSSSGYPSLAISADPATSSSRLQATPSTSAEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFASLNISLRSSGSSMSVPSQLRSSSYYNPNFSLQQPRKSLFPGIGLSPENTSTLLNFQSSSMGSMLHAKQELRDTSLEVSEGDEGIGRKRRHDQDLLSQHQMGSYLLQSSPGTIPATHGAQIPANFWMLTNTNNQVMGGDPIWTFPSVSNSALYRGTMSSGLHFMNFPAPMTLLPGQQLGSVIGIGSGGSSGASDGHLNMMTGLNPYRSMQNSSVLESAGTGSHSHHGGGSSDRGDDRHDSTTNN 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11348752 11349915 + Bpe005815.1 Bpe12g00551 112564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00551 387 MobiDBLite consensus disorder prediction 356 370 - -
Bpe12g00551 387 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 14 385 - -
Bpe12g00551 387 Pfam TCP family transcription factor 77 243 IPR017887 -
Bpe12g00551 387 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 385 IPR005333 GO:0003700
Bpe12g00551 387 MobiDBLite consensus disorder prediction 37 72 - -
Bpe12g00551 387 MobiDBLite consensus disorder prediction 1 90 - -
Bpe12g00551 387 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Bpe12g00551 387 MobiDBLite consensus disorder prediction 371 387 - -
Bpe12g00551 387 MobiDBLite consensus disorder prediction 73 90 - -
Bpe12g00551 387 MobiDBLite consensus disorder prediction 356 387 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00785 Bpe12g00551 CCT
Bpe12g00551 Bpe15g00605 CCT
Bpe12g00551 Bpe15g00605 ECH
Bpe07g00785 Bpe12g00551 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00550 Bpe-Chr9:14289329 Bpe12g00551 Bpe-Chr12:11348752 1.17E-39 dispersed
Bpe12g00551 Bpe-Chr12:11348752 Bpe13g01416 Bpe-Chr13:19402438 3.27E-96 dispersed
Bpe12g00551 Bpe-Chr12:11348752 Bpe15g00605 Bpe-Chr15:16963063 1.21E-110 wgd
Bpe12g00551 Bpe-Chr12:11348752 Bpe07g00785 Bpe-Chr7:14287029 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22212 PF03634 TCP 1.20E-39 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00551 - - csv:101221049 489.96