Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00555 GATGAAGAGCTTGAATCAGCAAGAGTAGAAATGGGAGAGGTGAGAGAAGAAAACCAACGCCTAAAAATGTGCTTAGATCAGATAATGAAGAATTACAGGATGCTACAAATGCAGTTCGATGACATTGTTCAACAAGATGAAAAGAAAAACAAGATGCCACCTGCCGAATCTCGTAAAGAAGTCGAAGAAACCGACCTAGTTGCCCTTACGCTCGGAAGATTTCCAAGCACGGGAAAAACGATCAGTGAAAACATCTTGAATTCTCACAAACTGATAAAAGAAAATGATCAACAAATCATGACACAAGAATTAGCTCTAGGGTTAGACTGCAACTTCGATGGCTCTAGATTGAGTGATCGAATAAAGGCTCATTCACCGAAAGGTCGAAGCCCGAGTTCGAACAGCAACGAAGAGGTCAAAGAAGGAGAAGGGGAAGATCCATGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGAGAAGATGAAGTGATGCAGCAGAATCCACCAAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAACCCATGCCCAAGAGCTTATTATCGTTGTACTGGAGCTCAATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCCGAGGACATGTCGATTTTAATCACTACATACGAAGGAACCCACAACCACCCTCTCTCCGTCTCAGCCACCGCCATGGCATCCACCACTTCTGCAGCAGTGGCAATGCTATTATCCGGCTCATCAACCTCACAATTCGGCCCTAACCCATCAGCAACAACAGCCACCACCACTCAGGCAAATCTTCATGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTACCCAATTCTTCCATGTCATCTTCCTTGCCCACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTTCGTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCCATTTTGGCAGATCTTTTTCTTCATCGTATCCTCCCTGGTATCCTTTCACAAACTTGGATTTCGGTTCTTCTCAGTCCAACCTTATGTCTTGGGGCAATGGCCTTCTTGGCTATGGAAATCAACTGCCTTATAACAGAACCCAAATAGGAACTTTTGATATCGGAACTTATATGCAGAAGACAAATAACGTGCCAGCGGTAGCGGCGCCCCCACGACACCCTCTTCCGGACCCAATCGCCGCTGCAACGAAGACAATTACAGCGGACCCTAGTTTCCAATCTGCTTTAGCGGCGGCATTAACATCATTCATCGGAAATGGAGCTAGCGGCCGCGTCGCCGGTGAAAGTTTTCTGGAAAATTTGAAGTGGGTGGAGAAGTTTCCACTGGCGTCATCTACCCAAAAAGGAAACGGGTGCGGATCGAGCTTCATCAGCACCACGCCGGCGACGAATTCTCAGCATGGGAACTTGACGTTCTTACCTTCAAATTCATCGCCATTTTCGACATCCAAAAGTGTTTCTACATCTCTGGGAGATAACAGAGATCACCAACCTAGTTGA 1596 45.24 DEELESARVEMGEVREENQRLKMCLDQIMKNYRMLQMQFDDIVQQDEKKNKMPPAESRKEVEETDLVALTLGRFPSTGKTISENILNSHKLIKENDQQIMTQELALGLDCNFDGSRLSDRIKAHSPKGRSPSSNSNEEVKEGEGEDPWPPNKGLKTMRSGEDEVMQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAVAMLLSGSSTSQFGPNPSATTATTTQANLHGLNFYLSDNSNSKQFYLPNSSMSSSLPTHPTITIDLTSNPSSSSSSSASSSSSSSHFGRSFSSSYPPWYPFTNLDFGSSQSNLMSWGNGLLGYGNQLPYNRTQIGTFDIGTYMQKTNNVPAVAAPPRHPLPDPIAAATKTITADPSFQSALAAALTSFIGNGASGRVAGESFLENLKWVEKFPLASSTQKGNGCGSSFISTTPATNSQHGNLTFLPSNSSPFSTSKSVSTSLGDNRDHQPS 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11403395 11405351 + Bpe005819.1 Bpe12g00555 112568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00555 531 MobiDBLite consensus disorder prediction 119 171 - -
Bpe12g00555 531 ProSiteProfiles WRKY domain profile. 181 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe12g00555 531 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 3 526 - -
Bpe12g00555 531 MobiDBLite consensus disorder prediction 313 344 - -
Bpe12g00555 531 SUPERFAMILY WRKY DNA-binding domain 179 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe12g00555 531 MobiDBLite consensus disorder prediction 134 148 - -
Bpe12g00555 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 3 526 IPR044810 GO:0003700
Bpe12g00555 531 SMART WRKY_cls 186 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe12g00555 531 Gene3D WRKY domain 171 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe12g00555 531 MobiDBLite consensus disorder prediction 489 531 - -
Bpe12g00555 531 Pfam WRKY DNA -binding domain 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00791 Bpe12g00555 CCT
Bpe07g00791 Bpe12g00555 ECH
Bpe12g00555 Bpe13g00280 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00402 Bpe-Chr5:18422954 Bpe12g00555 Bpe-Chr12:11403395 1.12E-59 dispersed
Bpe12g00555 Bpe-Chr12:11403395 Bpe15g00723 Bpe-Chr15:17745681 8.14E-68 dispersed
Bpe12g00555 Bpe-Chr12:11403395 Bpe13g00280 Bpe-Chr13:10699745 2.87E-78 wgd
Bpe12g00555 Bpe-Chr12:11403395 Bpe15g00610 Bpe-Chr15:16979338 9.52E-84 wgd
Bpe12g00555 Bpe-Chr12:11403395 Bpe07g00791 Bpe-Chr7:14322658 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22214 PF03106 WRKY 9.10E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00555 - - tcc:18604620 526.939