Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00555 | GATGAAGAGCTTGAATCAGCAAGAGTAGAAATGGGAGAGGTGAGAGAAGAAAACCAACGCCTAAAAATGTGCTTAGATCAGATAATGAAGAATTACAGGATGCTACAAATGCAGTTCGATGACATTGTTCAACAAGATGAAAAGAAAAACAAGATGCCACCTGCCGAATCTCGTAAAGAAGTCGAAGAAACCGACCTAGTTGCCCTTACGCTCGGAAGATTTCCAAGCACGGGAAAAACGATCAGTGAAAACATCTTGAATTCTCACAAACTGATAAAAGAAAATGATCAACAAATCATGACACAAGAATTAGCTCTAGGGTTAGACTGCAACTTCGATGGCTCTAGATTGAGTGATCGAATAAAGGCTCATTCACCGAAAGGTCGAAGCCCGAGTTCGAACAGCAACGAAGAGGTCAAAGAAGGAGAAGGGGAAGATCCATGGCCACCCAACAAAGGTTTGAAGACAATGAGAAGTGGAGAAGATGAAGTGATGCAGCAGAATCCACCAAAGAAAGCTAGGGTTTGTGTGAGGGCTCGTTGTGATACGCCAACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAACCCATGCCCAAGAGCTTATTATCGTTGTACTGGAGCTCAATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCCGAGGACATGTCGATTTTAATCACTACATACGAAGGAACCCACAACCACCCTCTCTCCGTCTCAGCCACCGCCATGGCATCCACCACTTCTGCAGCAGTGGCAATGCTATTATCCGGCTCATCAACCTCACAATTCGGCCCTAACCCATCAGCAACAACAGCCACCACCACTCAGGCAAATCTTCATGGATTAAACTTCTATCTTTCTGACAATTCAAATTCAAAACAATTTTATTTACCCAATTCTTCCATGTCATCTTCCTTGCCCACACACCCAACAATCACCATAGACCTCACTTCAAATCCGTCTTCTTCTTCTTCGTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCCATTTTGGCAGATCTTTTTCTTCATCGTATCCTCCCTGGTATCCTTTCACAAACTTGGATTTCGGTTCTTCTCAGTCCAACCTTATGTCTTGGGGCAATGGCCTTCTTGGCTATGGAAATCAACTGCCTTATAACAGAACCCAAATAGGAACTTTTGATATCGGAACTTATATGCAGAAGACAAATAACGTGCCAGCGGTAGCGGCGCCCCCACGACACCCTCTTCCGGACCCAATCGCCGCTGCAACGAAGACAATTACAGCGGACCCTAGTTTCCAATCTGCTTTAGCGGCGGCATTAACATCATTCATCGGAAATGGAGCTAGCGGCCGCGTCGCCGGTGAAAGTTTTCTGGAAAATTTGAAGTGGGTGGAGAAGTTTCCACTGGCGTCATCTACCCAAAAAGGAAACGGGTGCGGATCGAGCTTCATCAGCACCACGCCGGCGACGAATTCTCAGCATGGGAACTTGACGTTCTTACCTTCAAATTCATCGCCATTTTCGACATCCAAAAGTGTTTCTACATCTCTGGGAGATAACAGAGATCACCAACCTAGTTGA | 1596 | 45.24 | DEELESARVEMGEVREENQRLKMCLDQIMKNYRMLQMQFDDIVQQDEKKNKMPPAESRKEVEETDLVALTLGRFPSTGKTISENILNSHKLIKENDQQIMTQELALGLDCNFDGSRLSDRIKAHSPKGRSPSSNSNEEVKEGEGEDPWPPNKGLKTMRSGEDEVMQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAQSCPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAVAMLLSGSSTSQFGPNPSATTATTTQANLHGLNFYLSDNSNSKQFYLPNSSMSSSLPTHPTITIDLTSNPSSSSSSSASSSSSSSHFGRSFSSSYPPWYPFTNLDFGSSQSNLMSWGNGLLGYGNQLPYNRTQIGTFDIGTYMQKTNNVPAVAAPPRHPLPDPIAAATKTITADPSFQSALAAALTSFIGNGASGRVAGESFLENLKWVEKFPLASSTQKGNGCGSSFISTTPATNSQHGNLTFLPSNSSPFSTSKSVSTSLGDNRDHQPS | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11403395 | 11405351 | + | Bpe005819.1 | Bpe12g00555 | 112568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00555 | 531 | MobiDBLite | consensus disorder prediction | 119 | 171 | - | - | |
Bpe12g00555 | 531 | ProSiteProfiles | WRKY domain profile. | 181 | 247 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00555 | 531 | PANTHER | WRKY TRANSCRIPTION FACTOR 61-RELATED | 3 | 526 | - | - | |
Bpe12g00555 | 531 | MobiDBLite | consensus disorder prediction | 313 | 344 | - | - | |
Bpe12g00555 | 531 | SUPERFAMILY | WRKY DNA-binding domain | 179 | 246 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00555 | 531 | MobiDBLite | consensus disorder prediction | 134 | 148 | - | - | |
Bpe12g00555 | 531 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 3 | 526 | IPR044810 | GO:0003700 | |
Bpe12g00555 | 531 | SMART | WRKY_cls | 186 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00555 | 531 | Gene3D | WRKY domain | 171 | 247 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe12g00555 | 531 | MobiDBLite | consensus disorder prediction | 489 | 531 | - | - | |
Bpe12g00555 | 531 | Pfam | WRKY DNA -binding domain | 187 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe07g00791 | Bpe12g00555 | CCT | |
Bpe07g00791 | Bpe12g00555 | ECH | |
Bpe12g00555 | Bpe13g00280 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00402 | Bpe-Chr5:18422954 | Bpe12g00555 | Bpe-Chr12:11403395 | 1.12E-59 | dispersed | |
Bpe12g00555 | Bpe-Chr12:11403395 | Bpe15g00723 | Bpe-Chr15:17745681 | 8.14E-68 | dispersed | |
Bpe12g00555 | Bpe-Chr12:11403395 | Bpe13g00280 | Bpe-Chr13:10699745 | 2.87E-78 | wgd | |
Bpe12g00555 | Bpe-Chr12:11403395 | Bpe15g00610 | Bpe-Chr15:16979338 | 9.52E-84 | wgd | |
Bpe12g00555 | Bpe-Chr12:11403395 | Bpe07g00791 | Bpe-Chr7:14322658 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22214 | PF03106 | WRKY | 9.10E-24 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00555 | - | - | tcc:18604620 | 526.939 |