Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00558 ATGCCTGGAAGTATAATTGAGATCGAGCTTTACAACTTTATGACCTTCAATCACTTAAAATGCAAACCGGGATCACGATTGAACCTTGTTATTGGTCCTAATGGATCTGGAAAAAGCTCAATTGTTTGTGCCATTGCACTTGGTCTCGGTGGCGAGCCTCAGCTTCTTGGGAGAGCCACAAATATTGGTGCATTTGTGAAACGTGGAGAGGAGTCTGGCTATATAAAAATTACCTTGAGAGGCGAGACTAAAGAAGAGCAGATTGCCATCATGCGGAGAATGGACACTCGCAATAAGTCTGAGTGGTTGTTCAATGGAAAAGTGGCTCCAAAAAAAGAAGTATCCGCAATTATACAAAGGTTCAACATCCAAGTTAATAATTTGACTCAATTTTTGCCACAGGACAGGGTTTGTGAGTTTGCAAAACTAACTCCTGTGCAACTTCTAGAAGAGACTGAAAAAGCCATTGGCGATACTCAACTTCCAGGCCAACATCGTGCACTTGTTGAAAAGAGCCGTGAAATAAAGAATATAGAGCGGGCTGTGGAAAAAAATGGGGACACATTGAATCAGTTGAAGGCACTAAATGCTGAGCTAGAGAAGGATGTTGAGCGTGTTCGTCAAAGGGAAATACTTCTAGCAAAGGCAGATATCATTTTTTGTTTTTTTTCTTTTCAACCATCGGCTGAGTCCTTGAAAAAGAAATTGCCGTGGCTTAAGTATGATATAAAGAAGGTTGAATATATAGAATTAAAGGAGAAGGAGAATGATGCCAAAAAGAAGTTGGATGAAGCAGCAACGACATTAAATGGTCTCAAAGAACCCATTGAGAAACATAAAAAGGAGAAAGCAGCGGTGGATGCTAAAAGCAAAAAAATTAGCAATATCATGAATAATAATACGAGAAAACGAATCGAGCTTCTAGATAATGAAAACCATTTGGGGGTAGAAATACAAAGCAAGTACAAAGAAATGGGAGATTTGAGGAAGCAAGAAGAGTCTCGGCAACAAAGAATTATGCAAGCTAAGGAGGAACTTGTTGCAGCTGAACTAGAGCTTCAAAATTTGCGTCCTTATTGTGTTCCAAGGGAGGATATTGAAAGATTAGCTAGTCAAATAATGGATCTTGAACTTTCTGCAAATCAAAAGAGGTTGTCTAAGACAGAGAGCGAAAAAGTCTTAGCTCAGAAAAGGATAGCCTTGAGACAGTGCTTAGACAGGTTAAAGGATATGGAAAGCAAACATACTAAACTTTTGCAGGCATTGAAAAATTCTGGAGCTGATAAAATTTCTGATGCTTACCACTGGTTGCAAGAACATCGCCATGATTTCAACAAGGAGGTTTATGGTCCAATTTTGCTTGAGGTTAATGTTTCTAATCAGATTCATGCTGACTACTTGGAAAGTCAAACCCCTCATTACATCTGGAAGCTTTTATTTCTTTTGGTTTTTGACTTGCAGTCTTTTGTAACTCAAGATTCTAACGATCGTGACCTTTTGGTCAAATGTTTCAAATCATTTGATGTTCCCATTTTGAATTACGTGGATGATGAGGGTTGTCGAAAAGAAAAATTTGAAATTACTGAGGAGATGCGCAAACTTGGCATCTATTCCAGGCTTGACCAAGTTTTTGATGCTCCCAACTCTGTGAAGGAAGTTTTGATCAGTCAGTTTGCTTTGGATCGCTCATATATTGGTTCTAAGGAGACTGATCAGAAGGCAGATGCAGTTTCAAAATATGGAATTTTAGATTTTTGGACTCCAGAAAATCACTATCACTGGTCTGTATCCAGATACGGTGACCATATGACTGGAAATGTGGAACCAGTGGAGCGCTCTCGTCTTCTTCTATGCAATAAGGATGTGGGTGAAGTTGATGGTATGAGATTGAGGAAAAGTGAACTGGAAGAATCTGTCGCAGCTTTAGAAGAAAGCCACAAGTTTTTTCAGATTGAGATAAGAAACATAGAAAATGAAACAGCTAAACTTCGTAAACAACGGGAGGACATTATCAGCATTGTGCACCAGGAGAAGAGGAAGCGTCAGGAAATGGAAAATCGTATCAATCAAAGGAAAAAGAAACTAGAATCTATGACACAAGAGGAAGACTTGGAGACTTCCATAGCGAAGCTTAATGATCAAGCCGCAGGTATATCTATTCAACGGTTCCGATGTGCAATAGAGATTAAGAATCTACTTGTAGATACTGTATCCCACCGACGAAGTTTTGCTCTACATCATTTGTCATCAATTGAATTTGATGCTAAGATTAGAGACATGGAATTCAATATGAAGAAACAGGAGAAGGATGCTATGCAAGCATCATTGCACTTAGAGAATTGTAAGAAGGAAGTAGAGGATTGTAGACAGCAACTGTCAGTTGCTAAGAGGCATGCGGAATCAATTGCTGTGATCACTCCTGAACTTAAAAAGGATTTTCTTGAGATGCCAACTACAATCGAAGAATTGGAGACCGCAATTCAAGACAATATTTCTCAAGCTAATTCTATTTTATTCTTGAACCACAACATATTAGAGGAGTATGAACATAGACAGAGTCAGATAGGAAGCATTGCAACAAAACTTGTAACTGATCAAGAGGAGCTCAAAAGGCGGGTCACTGAAGTTGATGATCTCAAGAAAAATTGGCTTCCTACTTTGAGAACCCTTGTTACTCAGATTAATGAGACCTTCAGTCGCAACTTCCAAGAGATGGCTGTTGCTGGAGAAGTCTCGTTGGATGAGCATGGCATGGACTTCGATAAATTTGGAATTCTTATAAAAGTTAAGTTCAGACAATCAGGACAGCTTCAGGTTCTCAGTGCTCACCATCAGTCTGGCGGGGAACGCTCAGTTTCAACAATTCTTTATCTTGTATCTCTTCAAAACCTTACCAACTGCCCGTTTAGGGTGGTTGATGAGATAAATCAAGGAATGGATCCAATTAATGAAAGGAAGATGTTCCAGCAGTTGGTGAGAGCTGCTAGCCAACCAAATACACCACAGTGTTTTTTATTGACCCCAAAGTTACTACCAGATTTAGTATATAGTGAGGCTTGCAGTATCTTGAATATCATGAACGGTCCCTGGATTGAGGATCCCTCCAAAGTGTGGAGTAGTGGAGACCGCTGGGCAGCGGTCATGGGGTTGGTTGGAGAAAGTAGATCCTGA 3171 39.77 MPGSIIEIELYNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATNIGAFVKRGEESGYIKITLRGETKEEQIAIMRRMDTRNKSEWLFNGKVAPKKEVSAIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAIGDTQLPGQHRALVEKSREIKNIERAVEKNGDTLNQLKALNAELEKDVERVRQREILLAKADIIFCFFSFQPSAESLKKKLPWLKYDIKKVEYIELKEKENDAKKKLDEAATTLNGLKEPIEKHKKEKAAVDAKSKKISNIMNNNTRKRIELLDNENHLGVEIQSKYKEMGDLRKQEESRQQRIMQAKEELVAAELELQNLRPYCVPREDIERLASQIMDLELSANQKRLSKTESEKVLAQKRIALRQCLDRLKDMESKHTKLLQALKNSGADKISDAYHWLQEHRHDFNKEVYGPILLEVNVSNQIHADYLESQTPHYIWKLLFLLVFDLQSFVTQDSNDRDLLVKCFKSFDVPILNYVDDEGCRKEKFEITEEMRKLGIYSRLDQVFDAPNSVKEVLISQFALDRSYIGSKETDQKADAVSKYGILDFWTPENHYHWSVSRYGDHMTGNVEPVERSRLLLCNKDVGEVDGMRLRKSELEESVAALEESHKFFQIEIRNIENETAKLRKQREDIISIVHQEKRKRQEMENRINQRKKKLESMTQEEDLETSIAKLNDQAAGISIQRFRCAIEIKNLLVDTVSHRRSFALHHLSSIEFDAKIRDMEFNMKKQEKDAMQASLHLENCKKEVEDCRQQLSVAKRHAESIAVITPELKKDFLEMPTTIEELETAIQDNISQANSILFLNHNILEEYEHRQSQIGSIATKLVTDQEELKRRVTEVDDLKKNWLPTLRTLVTQINETFSRNFQEMAVAGEVSLDEHGMDFDKFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQNLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLVYSEACSILNIMNGPWIEDPSKVWSSGDRWAAVMGLVGESRS 1056
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11422644 11444647 - Bpe005822.1 Bpe12g00558 112571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00558 1056 CDD ABC_SMC5_euk 929 1031 - -
Bpe12g00558 1056 Coils Coil 325 352 - -
Bpe12g00558 1056 Coils Coil 394 414 - -
Bpe12g00558 1056 Coils Coil 248 268 - -
Bpe12g00558 1056 Coils Coil 674 701 - -
Bpe12g00558 1056 Pfam RecF/RecN/SMC N terminal domain 5 996 IPR003395 -
Bpe12g00558 1056 Coils Coil 178 209 - -
Bpe12g00558 1056 CDD ABC_SMC5_euk 3 149 - -
Bpe12g00558 1056 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1053 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Bpe12g00558 1056 Coils Coil 625 666 - -
Bpe12g00558 1056 Gene3D - 850 1028 IPR027417 -
Bpe12g00558 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 999 IPR027417 -
Bpe12g00558 1056 Coils Coil 764 798 - -
Bpe12g00558 1056 Gene3D - 4 200 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00360 Bpe-Chr3:8598346 Bpe12g00558 Bpe-Chr12:11422644 3.96E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00558 K22803 - csv:101210248 1525.38