Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00561 | ATGGGGCATAAGAAGAAAAATGTTGCTCCTCGTTCAAAACAATCTGAGGCGGCTTCACCGGCGGCTGAAGTTGCTGTTGGCGGAGCCGCCGTTGATGCCGTGAGTATATTAAAGTCTGACCCTTGCTTGCAACCTCATGATCCCAATAATCTGAACCTTCATAATCACAACCAAGGCGAGGATGAGCCTGGGGCCGGGATTGAGTCAAATAGCTCATCTTTCTCCATTGTTAAGCTCGAATGTGAACGTGGGCTCACTGCCCTACGGAGGGGGAACCACAAGAGGGCTCTAAAGATGATGAAAGAGGCATGTTTAAGGCATGAGAATTCAGCTTTGATTCACCGGGTTCAGGGAACGGTTTGTATCAAAGTTGCGTCGATGATTGATGATTTACACACAAAGCAGCGGCATTTAAAGAATGCAATTGAGTCAGCTCATAAAGCCGTTGAACTCTCACCAAACTCCATTGAATTTGCGCACTTCTACGCAAATTTGCTGTATGAGGCAGCAAATGATGGGAAGGAGTATGAAGAAGTGGTGCAAGAGTGTGAACGGGCACTTGGAATTGAAAACCCAATTGATCCTGCAAAAGAAAGCTTGCAGGATGAGAGCAAGCAAAAGATATCGACAGCTGAAGCTCGAATTTCTCATGTGCAAAATGAGTTGCAGCAGCTTATTCAGAAGTCAAACCTTGTTTCTCTATCAACCTGGATGAAGAATTTCGGGAATGGGGAAGAGAAATTTCGGTTGATTCCAATCAGAAGGGTGGCAGAAGACCCCATGGAGGTTACGTTGGTTCAGGCTAAGAGGCCAAATGAGATCACGAAAGCAAATAGAACCCCAGAGGAACGTAGGAAGGAGATTGAAGTTCGTGTTGCTGCTGCAAGACTTTTGCAGCAGAAATCTGAGACATCCCATGTGCAAAACGAGGGAGATAAGAGTGATATACAGTCAGGGTCTGGCCAGAGATCAGGTGAGCGGAGGAAGCATGGGAATTTAAGGAAACAGGGATCTTCAGCTGAAAGGAAGAATAGGGTTCAGTTGTATTGGAAGTCTTTGAGTATTGACTCAAAGAAAGACTTTCTTAGGGTAAGGATAAATGATCTTAGGGGCCATTTTAATTCTTCTAAGGATGGTTCTGCCGCTGAAGTACTCTCAGAAGCTTTATCCTTCTTTGAGGCCAATAAAACGTGGAAGTTCTGGCTTTGCTGCCAATGTATTGAGAAATTTGCTGACTCTGATTCTCATATGCAACATATAGTGCAGGATCACATGCCTAATCTCTTGCCAAAGATGCAGTCCATTTTGCCAAAGAATGTAAAAAATGAGTGGGTTGAGATGATTCTTAGTTGCCCTTGGAAACCATTGGATGTCTCAGCTTCTGTTAAAATGGTGACAAATAGAACACTATACGAAGGTGCTAAAATTGTTGAAGATAATTGCTCAGATTACCATACCAGGGATTGTGACGAATACTTCAAAGATGCATGGGATTCATCTCCAGGTAAAAAAAGTTCCGGAAACGTTTCCATTAACAATGCTTTTGAAAACTGTGGAAAAAATTCTGAGTATGAAAGTCTTCACAAAGATCAGGGATCTAATACACATTCTCTGCCGGACAACTGGCCAATCTCCGATGATTTAGATCGTTCAAAGCTTCTTGAAAGAATTCATGTCATATTTGAGTTGCTTATCAGTCATAAATATCTTGCCGAAAGCCATCTGAAAGAGGTTATTCAATATACAACGGATGAGCTTCAGGGTCTTCCCTCTGGTTCTTATCTTCTAAACCATGGTTTGGACCAAACACCAATTTGCATGTGCTTTTTGGGAGCTTCACAGCTTAAGAAAATTCTCAAATACTTGCAAGAATTGTCTCATTCTTGCGGTTTAAGTATATATTCCGAGAAGAGTAACAATCACATAAATGATGTCAACAGCGGCACACAAGTTATTGCGAATAAAGTCAAGATTGCTTTGAATGGCGATGGGTCATATCTCCTTCTTGATGGTTGCTTAATGTCAGATGACTGTCTTGCTGGTAATGTCAGCAATAGTTGCGCAGATAATGTTGTTAGTGCAACTCCTGTGAAGACTGCAAATGCAAACTGGATTCTTCCTGATGTGGATGCCCTGTTGTCTTACATTTTGGTTGACCATGCAAGCGAGGATAAGCTGGCATCATGGCTACGTGCTAAAGAAGAAAAAATTCAAGAAGGAATAGAAATTCTCCATATGCTGGAGAAGGAATTTTACCACCTACAGAGCCTTTGTGAGAGAAAATGTGAACATTTAAGCTATGAAGGCGCATTACATGCTGTGGAGGATCTTTGTCTTGCAGAAGGTAAAAAGAGGGAGAATATGACTGACTCTGGGAATCAACACTACGAATCTGTTCTCAGAAAGCGAAGAGAAGAGCTTATTCGAGCAGAAAATGATGAGATGTTACTCAGTAGTAAATTTGATTTGGATGCTTTAAACGATGTTTTAAAAGAAGCAGAAGCTCTTAGTGCCAATCAATTCGGAAGCGATGAAACTTATGCAGGGATGACTTCTCAGTTGTGTGACTTGCAATCTGGGGAAGATGAATATTGGAGAGCTAAAGACTACTTGCGTGAAGCTGATTCATGTATTGAAGTTGCAATTCAAAGGCAAAAGGAACAGTTATCTATAGAGATTAGCAAAATTGATGCACTAATCATGAGAAATGTAACTGGAATGCAGCATTTGGAACTCAAGCTCGAGCCTGTTTGTGCTCATGATTATCAGTCAATACTATTGCCTCTTGTGCAATCGTACTTGAGGGTGCAATTGGAGGATCTGGCCGAGAAAGATGCAACAGAAAAATCTGATGCTGCAAGAGAAGCATTTTTAGCTGAGCTTGAGCTAGATTCAAAGAAAGGCATCAGACGAAGCAATGATAATTTGAGACACTCCCAGGAAAAAACAAAAGACAAAAAAAAGCACAAGGAATCTAGAAAAATCAAAGATTCCAAGGTTCAAATTTTGCAGTCTGATTTTTTGCCTTTAACTTATTCTTTTTCCCTTCAATCTGATGATGGCGAAGTTCTAGATTCAGATGCTGCCGTGTCTGAAGATGCTGATGAATTGAAACTTCAAGAAGAGGAATTTAGACAGAAAATTGAGCTTGAAGCTGAAGAAAGAAAGCTTGAAGAGACTTTAGAATATCAAAGACGAATTGAGGAGGAAGCCAAGCAGAAGCATCTTGCTGAGCCAGAAGAAAAGATCACAGTGAGTATTTGGCACTGTGCCTCTGTTTTACTTAAGAGGATAATTAGAGGAGTTATTTGTCTATTTACATGTTTCCAGAAACAACTGATAGAAGGCAATGCATTTCCCACAAATTTTGATGGCTTGCCCATGAATGGCACTCCAACAACATTGAGACTTCATGATACTGCAGAATTGTCTAATGGTAGAATTTTCGAGAATCGTCTCCCTCCTTATGATCGACGGACTGGAAGGAAAGGTAGACGATCAAAGGGTTCTGCTAAATTGGTCAATGGAAGGTATCAAACCATAGCATTTGACCAGGATATTTGTGATTTAGAAGCTAGGAGTTCACAGCTTGATAATCCAGTAAAAGAGCAAGATAAATTTCATGACAATCCCCTGGCAGATAGTGTTCCTTCTGCTTTGGAAGATAATGGTACAACCCCATTAAGTCATTTACAAGTGGAGGAGGAGGAGGAACGGTTCAAAGCGGATCTTAAAAAGGCAGTGCTCCAAAGCCTTGATGCATCCAAGGCACACAAGAAGTTGCCAAGGGTTTCAGGAGTGAGAAAACCACCTATCACTTCTGCTGTAGTGGATCACATTGGCGTTTCATCAAATGATGTAAAAGGAGAAATTGCAAAGAGAACAGATGTATTTGGTACAGGGCTGAAGAATGAAGTTGGTGAATATAATTGCTTTCTTAATGTCATTATACAGTCCTTGTGGCATTTAAGACCGTTTCGAGATGAGTTCCTGAGGAGGTCTGCCATTGAGCATGTTCATGTGGGGTATCCTTGTGTTGTCTGTGCATTATATGAAATCTTCAGCTCCCTGAGCATTGCATCCACCGCAGGTCAACAAGAACCGGTGGCCCCCTCTTCTCTGAGAATGGCTCTTAGCAACCTCTACCCTGATAGTAATTTCTTTCAGGAGGGTCAGATGAATGATGCTTCTGAAGTCCTAGAAGTGATATTTACCTGCCTTCACCAAGCATTTACGTCTACTAGTTTACGGGTTCCTGATGCTGAATTAGTTGATAGCAACAGCATAGCGTCTTGGGATTGTGGAAATGATGTTTGTATAGTGCATTCCATTTTTGGTCTGGACATTTTTGAACGAATGAACTGTTGCAGCTGTGGACTTGAGTCCAGATATTTAAAGTATACTTCCTTCTTCCACAATATAAATGCAAGCGCCCTCCGAGCTACAAAGGTCATGTGTGAAGAAAGCTCGTTTGATGAGCTTTTAAATGTAGTTGAAATGAACCATCAGGTCGCATGCGATCTGGAGTCTGGTGGATGTGGAAAGCTCAACTATATCCATCACTTTCTTGCAGCTCCTCCACATATCTTCACAACAGTTTTGGGATGGCAGAATACACGTGAGAGTGTTGATGACATAAAAGCAACACTATCTGCTCTAAGTACTGAAATAGATATCGGCGCCTTCTATCGTGGTCTAGATCCGAAAAATACACATAGTTTGGTCTCAGTGGTATGCTACTACGGGCAACACTATCACTGCTTCGCGTATAGTCATCAGCATGAATGCTGGATTATGTATGATGATAAAACTGTTAAGGTAATTGGTAGCTGGGCTGAAGTTCTTACCATGTGTGAGAAGGGGCATTTGCAACCTCAGGTTCTTTTCTTCGAAGCTGTAAACTAG | 4905 | 41.49 | MGHKKKNVAPRSKQSEAASPAAEVAVGGAAVDAVSILKSDPCLQPHDPNNLNLHNHNQGEDEPGAGIESNSSSFSIVKLECERGLTALRRGNHKRALKMMKEACLRHENSALIHRVQGTVCIKVASMIDDLHTKQRHLKNAIESAHKAVELSPNSIEFAHFYANLLYEAANDGKEYEEVVQECERALGIENPIDPAKESLQDESKQKISTAEARISHVQNELQQLIQKSNLVSLSTWMKNFGNGEEKFRLIPIRRVAEDPMEVTLVQAKRPNEITKANRTPEERRKEIEVRVAAARLLQQKSETSHVQNEGDKSDIQSGSGQRSGERRKHGNLRKQGSSAERKNRVQLYWKSLSIDSKKDFLRVRINDLRGHFNSSKDGSAAEVLSEALSFFEANKTWKFWLCCQCIEKFADSDSHMQHIVQDHMPNLLPKMQSILPKNVKNEWVEMILSCPWKPLDVSASVKMVTNRTLYEGAKIVEDNCSDYHTRDCDEYFKDAWDSSPGKKSSGNVSINNAFENCGKNSEYESLHKDQGSNTHSLPDNWPISDDLDRSKLLERIHVIFELLISHKYLAESHLKEVIQYTTDELQGLPSGSYLLNHGLDQTPICMCFLGASQLKKILKYLQELSHSCGLSIYSEKSNNHINDVNSGTQVIANKVKIALNGDGSYLLLDGCLMSDDCLAGNVSNSCADNVVSATPVKTANANWILPDVDALLSYILVDHASEDKLASWLRAKEEKIQEGIEILHMLEKEFYHLQSLCERKCEHLSYEGALHAVEDLCLAEGKKRENMTDSGNQHYESVLRKRREELIRAENDEMLLSSKFDLDALNDVLKEAEALSANQFGSDETYAGMTSQLCDLQSGEDEYWRAKDYLREADSCIEVAIQRQKEQLSIEISKIDALIMRNVTGMQHLELKLEPVCAHDYQSILLPLVQSYLRVQLEDLAEKDATEKSDAAREAFLAELELDSKKGIRRSNDNLRHSQEKTKDKKKHKESRKIKDSKVQILQSDFLPLTYSFSLQSDDGEVLDSDAAVSEDADELKLQEEEFRQKIELEAEERKLEETLEYQRRIEEEAKQKHLAEPEEKITVSIWHCASVLLKRIIRGVICLFTCFQKQLIEGNAFPTNFDGLPMNGTPTTLRLHDTAELSNGRIFENRLPPYDRRTGRKGRRSKGSAKLVNGRYQTIAFDQDICDLEARSSQLDNPVKEQDKFHDNPLADSVPSALEDNGTTPLSHLQVEEEEERFKADLKKAVLQSLDASKAHKKLPRVSGVRKPPITSAVVDHIGVSSNDVKGEIAKRTDVFGTGLKNEVGEYNCFLNVIIQSLWHLRPFRDEFLRRSAIEHVHVGYPCVVCALYEIFSSLSIASTAGQQEPVAPSSLRMALSNLYPDSNFFQEGQMNDASEVLEVIFTCLHQAFTSTSLRVPDAELVDSNSIASWDCGNDVCIVHSIFGLDIFERMNCCSCGLESRYLKYTSFFHNINASALRATKVMCEESSFDELLNVVEMNHQVACDLESGGCGKLNYIHHFLAAPPHIFTTVLGWQNTRESVDDIKATLSALSTEIDIGAFYRGLDPKNTHSLVSVVCYYGQHYHCFAYSHQHECWIMYDDKTVKVIGSWAEVLTMCEKGHLQPQVLFFEAVN | 1634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11459588 | 11469218 | + | Bpe005825.1 | Bpe12g00561 | 112574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00561 | 1634 | Coils | Coil | 793 | 813 | - | - | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 299 | 321 | - | - | |
Bpe12g00561 | 1634 | Gene3D | Cysteine proteinases | 1284 | 1632 | - | - | |
Bpe12g00561 | 1634 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1300 | 1633 | IPR028889 | - | |
Bpe12g00561 | 1634 | Gene3D | Tetratricopeptide repeat domain | 67 | 227 | IPR011990 | GO:0005515 | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 969 | 997 | - | - | |
Bpe12g00561 | 1634 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1634 | - | - | |
Bpe12g00561 | 1634 | CDD | Peptidase_C19 | 1392 | 1631 | - | - | |
Bpe12g00561 | 1634 | SUPERFAMILY | TPR-like | 83 | 189 | IPR011990 | GO:0005515 | |
Bpe12g00561 | 1634 | Coils | Coil | 201 | 228 | - | - | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 299 | 340 | - | - | |
Bpe12g00561 | 1634 | Pfam | Protein of unknown function (DUF629) | 345 | 880 | IPR006865 | - | |
Bpe12g00561 | 1634 | Pfam | Protein of unknown function (DUF627) | 86 | 190 | IPR006866 | - | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bpe12g00561 | 1634 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1301 | 1629 | IPR001394 | GO:0004843|GO:0016579 | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 45 | 70 | - | - | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 322 | 340 | - | - | |
Bpe12g00561 | 1634 | Coils | Coil | 730 | 750 | - | - | |
Bpe12g00561 | 1634 | MobiDBLite | consensus disorder prediction | 1199 | 1225 | - | - | |
Bpe12g00561 | 1634 | PANTHER | INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE | 1 | 1634 | - | - | |
Bpe12g00561 | 1634 | SUPERFAMILY | Cysteine proteinases | 1300 | 1631 | IPR038765 | - | |
Bpe12g00561 | 1634 | Coils | Coil | 1034 | 1070 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe07g00798 | Bpe12g00561 | CCT | |
Bpe07g00798 | Bpe12g00561 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe12g00561 | Bpe-Chr12:11459588 | Bpe07g00798 | Bpe-Chr7:14355409 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00561 | - | - | mcha:111007268 | 1974.13 |