Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00561 ATGGGGCATAAGAAGAAAAATGTTGCTCCTCGTTCAAAACAATCTGAGGCGGCTTCACCGGCGGCTGAAGTTGCTGTTGGCGGAGCCGCCGTTGATGCCGTGAGTATATTAAAGTCTGACCCTTGCTTGCAACCTCATGATCCCAATAATCTGAACCTTCATAATCACAACCAAGGCGAGGATGAGCCTGGGGCCGGGATTGAGTCAAATAGCTCATCTTTCTCCATTGTTAAGCTCGAATGTGAACGTGGGCTCACTGCCCTACGGAGGGGGAACCACAAGAGGGCTCTAAAGATGATGAAAGAGGCATGTTTAAGGCATGAGAATTCAGCTTTGATTCACCGGGTTCAGGGAACGGTTTGTATCAAAGTTGCGTCGATGATTGATGATTTACACACAAAGCAGCGGCATTTAAAGAATGCAATTGAGTCAGCTCATAAAGCCGTTGAACTCTCACCAAACTCCATTGAATTTGCGCACTTCTACGCAAATTTGCTGTATGAGGCAGCAAATGATGGGAAGGAGTATGAAGAAGTGGTGCAAGAGTGTGAACGGGCACTTGGAATTGAAAACCCAATTGATCCTGCAAAAGAAAGCTTGCAGGATGAGAGCAAGCAAAAGATATCGACAGCTGAAGCTCGAATTTCTCATGTGCAAAATGAGTTGCAGCAGCTTATTCAGAAGTCAAACCTTGTTTCTCTATCAACCTGGATGAAGAATTTCGGGAATGGGGAAGAGAAATTTCGGTTGATTCCAATCAGAAGGGTGGCAGAAGACCCCATGGAGGTTACGTTGGTTCAGGCTAAGAGGCCAAATGAGATCACGAAAGCAAATAGAACCCCAGAGGAACGTAGGAAGGAGATTGAAGTTCGTGTTGCTGCTGCAAGACTTTTGCAGCAGAAATCTGAGACATCCCATGTGCAAAACGAGGGAGATAAGAGTGATATACAGTCAGGGTCTGGCCAGAGATCAGGTGAGCGGAGGAAGCATGGGAATTTAAGGAAACAGGGATCTTCAGCTGAAAGGAAGAATAGGGTTCAGTTGTATTGGAAGTCTTTGAGTATTGACTCAAAGAAAGACTTTCTTAGGGTAAGGATAAATGATCTTAGGGGCCATTTTAATTCTTCTAAGGATGGTTCTGCCGCTGAAGTACTCTCAGAAGCTTTATCCTTCTTTGAGGCCAATAAAACGTGGAAGTTCTGGCTTTGCTGCCAATGTATTGAGAAATTTGCTGACTCTGATTCTCATATGCAACATATAGTGCAGGATCACATGCCTAATCTCTTGCCAAAGATGCAGTCCATTTTGCCAAAGAATGTAAAAAATGAGTGGGTTGAGATGATTCTTAGTTGCCCTTGGAAACCATTGGATGTCTCAGCTTCTGTTAAAATGGTGACAAATAGAACACTATACGAAGGTGCTAAAATTGTTGAAGATAATTGCTCAGATTACCATACCAGGGATTGTGACGAATACTTCAAAGATGCATGGGATTCATCTCCAGGTAAAAAAAGTTCCGGAAACGTTTCCATTAACAATGCTTTTGAAAACTGTGGAAAAAATTCTGAGTATGAAAGTCTTCACAAAGATCAGGGATCTAATACACATTCTCTGCCGGACAACTGGCCAATCTCCGATGATTTAGATCGTTCAAAGCTTCTTGAAAGAATTCATGTCATATTTGAGTTGCTTATCAGTCATAAATATCTTGCCGAAAGCCATCTGAAAGAGGTTATTCAATATACAACGGATGAGCTTCAGGGTCTTCCCTCTGGTTCTTATCTTCTAAACCATGGTTTGGACCAAACACCAATTTGCATGTGCTTTTTGGGAGCTTCACAGCTTAAGAAAATTCTCAAATACTTGCAAGAATTGTCTCATTCTTGCGGTTTAAGTATATATTCCGAGAAGAGTAACAATCACATAAATGATGTCAACAGCGGCACACAAGTTATTGCGAATAAAGTCAAGATTGCTTTGAATGGCGATGGGTCATATCTCCTTCTTGATGGTTGCTTAATGTCAGATGACTGTCTTGCTGGTAATGTCAGCAATAGTTGCGCAGATAATGTTGTTAGTGCAACTCCTGTGAAGACTGCAAATGCAAACTGGATTCTTCCTGATGTGGATGCCCTGTTGTCTTACATTTTGGTTGACCATGCAAGCGAGGATAAGCTGGCATCATGGCTACGTGCTAAAGAAGAAAAAATTCAAGAAGGAATAGAAATTCTCCATATGCTGGAGAAGGAATTTTACCACCTACAGAGCCTTTGTGAGAGAAAATGTGAACATTTAAGCTATGAAGGCGCATTACATGCTGTGGAGGATCTTTGTCTTGCAGAAGGTAAAAAGAGGGAGAATATGACTGACTCTGGGAATCAACACTACGAATCTGTTCTCAGAAAGCGAAGAGAAGAGCTTATTCGAGCAGAAAATGATGAGATGTTACTCAGTAGTAAATTTGATTTGGATGCTTTAAACGATGTTTTAAAAGAAGCAGAAGCTCTTAGTGCCAATCAATTCGGAAGCGATGAAACTTATGCAGGGATGACTTCTCAGTTGTGTGACTTGCAATCTGGGGAAGATGAATATTGGAGAGCTAAAGACTACTTGCGTGAAGCTGATTCATGTATTGAAGTTGCAATTCAAAGGCAAAAGGAACAGTTATCTATAGAGATTAGCAAAATTGATGCACTAATCATGAGAAATGTAACTGGAATGCAGCATTTGGAACTCAAGCTCGAGCCTGTTTGTGCTCATGATTATCAGTCAATACTATTGCCTCTTGTGCAATCGTACTTGAGGGTGCAATTGGAGGATCTGGCCGAGAAAGATGCAACAGAAAAATCTGATGCTGCAAGAGAAGCATTTTTAGCTGAGCTTGAGCTAGATTCAAAGAAAGGCATCAGACGAAGCAATGATAATTTGAGACACTCCCAGGAAAAAACAAAAGACAAAAAAAAGCACAAGGAATCTAGAAAAATCAAAGATTCCAAGGTTCAAATTTTGCAGTCTGATTTTTTGCCTTTAACTTATTCTTTTTCCCTTCAATCTGATGATGGCGAAGTTCTAGATTCAGATGCTGCCGTGTCTGAAGATGCTGATGAATTGAAACTTCAAGAAGAGGAATTTAGACAGAAAATTGAGCTTGAAGCTGAAGAAAGAAAGCTTGAAGAGACTTTAGAATATCAAAGACGAATTGAGGAGGAAGCCAAGCAGAAGCATCTTGCTGAGCCAGAAGAAAAGATCACAGTGAGTATTTGGCACTGTGCCTCTGTTTTACTTAAGAGGATAATTAGAGGAGTTATTTGTCTATTTACATGTTTCCAGAAACAACTGATAGAAGGCAATGCATTTCCCACAAATTTTGATGGCTTGCCCATGAATGGCACTCCAACAACATTGAGACTTCATGATACTGCAGAATTGTCTAATGGTAGAATTTTCGAGAATCGTCTCCCTCCTTATGATCGACGGACTGGAAGGAAAGGTAGACGATCAAAGGGTTCTGCTAAATTGGTCAATGGAAGGTATCAAACCATAGCATTTGACCAGGATATTTGTGATTTAGAAGCTAGGAGTTCACAGCTTGATAATCCAGTAAAAGAGCAAGATAAATTTCATGACAATCCCCTGGCAGATAGTGTTCCTTCTGCTTTGGAAGATAATGGTACAACCCCATTAAGTCATTTACAAGTGGAGGAGGAGGAGGAACGGTTCAAAGCGGATCTTAAAAAGGCAGTGCTCCAAAGCCTTGATGCATCCAAGGCACACAAGAAGTTGCCAAGGGTTTCAGGAGTGAGAAAACCACCTATCACTTCTGCTGTAGTGGATCACATTGGCGTTTCATCAAATGATGTAAAAGGAGAAATTGCAAAGAGAACAGATGTATTTGGTACAGGGCTGAAGAATGAAGTTGGTGAATATAATTGCTTTCTTAATGTCATTATACAGTCCTTGTGGCATTTAAGACCGTTTCGAGATGAGTTCCTGAGGAGGTCTGCCATTGAGCATGTTCATGTGGGGTATCCTTGTGTTGTCTGTGCATTATATGAAATCTTCAGCTCCCTGAGCATTGCATCCACCGCAGGTCAACAAGAACCGGTGGCCCCCTCTTCTCTGAGAATGGCTCTTAGCAACCTCTACCCTGATAGTAATTTCTTTCAGGAGGGTCAGATGAATGATGCTTCTGAAGTCCTAGAAGTGATATTTACCTGCCTTCACCAAGCATTTACGTCTACTAGTTTACGGGTTCCTGATGCTGAATTAGTTGATAGCAACAGCATAGCGTCTTGGGATTGTGGAAATGATGTTTGTATAGTGCATTCCATTTTTGGTCTGGACATTTTTGAACGAATGAACTGTTGCAGCTGTGGACTTGAGTCCAGATATTTAAAGTATACTTCCTTCTTCCACAATATAAATGCAAGCGCCCTCCGAGCTACAAAGGTCATGTGTGAAGAAAGCTCGTTTGATGAGCTTTTAAATGTAGTTGAAATGAACCATCAGGTCGCATGCGATCTGGAGTCTGGTGGATGTGGAAAGCTCAACTATATCCATCACTTTCTTGCAGCTCCTCCACATATCTTCACAACAGTTTTGGGATGGCAGAATACACGTGAGAGTGTTGATGACATAAAAGCAACACTATCTGCTCTAAGTACTGAAATAGATATCGGCGCCTTCTATCGTGGTCTAGATCCGAAAAATACACATAGTTTGGTCTCAGTGGTATGCTACTACGGGCAACACTATCACTGCTTCGCGTATAGTCATCAGCATGAATGCTGGATTATGTATGATGATAAAACTGTTAAGGTAATTGGTAGCTGGGCTGAAGTTCTTACCATGTGTGAGAAGGGGCATTTGCAACCTCAGGTTCTTTTCTTCGAAGCTGTAAACTAG 4905 41.49 MGHKKKNVAPRSKQSEAASPAAEVAVGGAAVDAVSILKSDPCLQPHDPNNLNLHNHNQGEDEPGAGIESNSSSFSIVKLECERGLTALRRGNHKRALKMMKEACLRHENSALIHRVQGTVCIKVASMIDDLHTKQRHLKNAIESAHKAVELSPNSIEFAHFYANLLYEAANDGKEYEEVVQECERALGIENPIDPAKESLQDESKQKISTAEARISHVQNELQQLIQKSNLVSLSTWMKNFGNGEEKFRLIPIRRVAEDPMEVTLVQAKRPNEITKANRTPEERRKEIEVRVAAARLLQQKSETSHVQNEGDKSDIQSGSGQRSGERRKHGNLRKQGSSAERKNRVQLYWKSLSIDSKKDFLRVRINDLRGHFNSSKDGSAAEVLSEALSFFEANKTWKFWLCCQCIEKFADSDSHMQHIVQDHMPNLLPKMQSILPKNVKNEWVEMILSCPWKPLDVSASVKMVTNRTLYEGAKIVEDNCSDYHTRDCDEYFKDAWDSSPGKKSSGNVSINNAFENCGKNSEYESLHKDQGSNTHSLPDNWPISDDLDRSKLLERIHVIFELLISHKYLAESHLKEVIQYTTDELQGLPSGSYLLNHGLDQTPICMCFLGASQLKKILKYLQELSHSCGLSIYSEKSNNHINDVNSGTQVIANKVKIALNGDGSYLLLDGCLMSDDCLAGNVSNSCADNVVSATPVKTANANWILPDVDALLSYILVDHASEDKLASWLRAKEEKIQEGIEILHMLEKEFYHLQSLCERKCEHLSYEGALHAVEDLCLAEGKKRENMTDSGNQHYESVLRKRREELIRAENDEMLLSSKFDLDALNDVLKEAEALSANQFGSDETYAGMTSQLCDLQSGEDEYWRAKDYLREADSCIEVAIQRQKEQLSIEISKIDALIMRNVTGMQHLELKLEPVCAHDYQSILLPLVQSYLRVQLEDLAEKDATEKSDAAREAFLAELELDSKKGIRRSNDNLRHSQEKTKDKKKHKESRKIKDSKVQILQSDFLPLTYSFSLQSDDGEVLDSDAAVSEDADELKLQEEEFRQKIELEAEERKLEETLEYQRRIEEEAKQKHLAEPEEKITVSIWHCASVLLKRIIRGVICLFTCFQKQLIEGNAFPTNFDGLPMNGTPTTLRLHDTAELSNGRIFENRLPPYDRRTGRKGRRSKGSAKLVNGRYQTIAFDQDICDLEARSSQLDNPVKEQDKFHDNPLADSVPSALEDNGTTPLSHLQVEEEEERFKADLKKAVLQSLDASKAHKKLPRVSGVRKPPITSAVVDHIGVSSNDVKGEIAKRTDVFGTGLKNEVGEYNCFLNVIIQSLWHLRPFRDEFLRRSAIEHVHVGYPCVVCALYEIFSSLSIASTAGQQEPVAPSSLRMALSNLYPDSNFFQEGQMNDASEVLEVIFTCLHQAFTSTSLRVPDAELVDSNSIASWDCGNDVCIVHSIFGLDIFERMNCCSCGLESRYLKYTSFFHNINASALRATKVMCEESSFDELLNVVEMNHQVACDLESGGCGKLNYIHHFLAAPPHIFTTVLGWQNTRESVDDIKATLSALSTEIDIGAFYRGLDPKNTHSLVSVVCYYGQHYHCFAYSHQHECWIMYDDKTVKVIGSWAEVLTMCEKGHLQPQVLFFEAVN 1634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11459588 11469218 + Bpe005825.1 Bpe12g00561 112574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00561 1634 Coils Coil 793 813 - -
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 299 321 - -
Bpe12g00561 1634 Gene3D Cysteine proteinases 1284 1632 - -
Bpe12g00561 1634 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1300 1633 IPR028889 -
Bpe12g00561 1634 Gene3D Tetratricopeptide repeat domain 67 227 IPR011990 GO:0005515
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 969 997 - -
Bpe12g00561 1634 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1634 - -
Bpe12g00561 1634 CDD Peptidase_C19 1392 1631 - -
Bpe12g00561 1634 SUPERFAMILY TPR-like 83 189 IPR011990 GO:0005515
Bpe12g00561 1634 Coils Coil 201 228 - -
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 299 340 - -
Bpe12g00561 1634 Pfam Protein of unknown function (DUF629) 345 880 IPR006865 -
Bpe12g00561 1634 Pfam Protein of unknown function (DUF627) 86 190 IPR006866 -
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 1 24 - -
Bpe12g00561 1634 Pfam Ubiquitin carboxyl-terminal hydrolase 1301 1629 IPR001394 GO:0004843|GO:0016579
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 45 70 - -
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 322 340 - -
Bpe12g00561 1634 Coils Coil 730 750 - -
Bpe12g00561 1634 MobiDBLite consensus disorder prediction 1199 1225 - -
Bpe12g00561 1634 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1634 - -
Bpe12g00561 1634 SUPERFAMILY Cysteine proteinases 1300 1631 IPR038765 -
Bpe12g00561 1634 Coils Coil 1034 1070 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00798 Bpe12g00561 CCT
Bpe07g00798 Bpe12g00561 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00561 Bpe-Chr12:11459588 Bpe07g00798 Bpe-Chr7:14355409 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00561 - - mcha:111007268 1974.13