Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00567 | ATGGATCCTCCCCTAGTAAACGAGTCTTCCTTCTCGGCCGCCAACCCGTCTGCTTACAGCTTGGCTGAGATTTGGCCGTTCAGCGGAGCATCCGACGGAGTACTGGGACTACGAACCGGTAATTTGGGTCGAAATAATGGTGGGTTAGCTGAGGGTTCTGGAAATCGTGATGGGTCGGCGGAGGAATCGACAGTGACTGGGCAGAGCGGGGGCGGAGGGAAGAGGAAGAGGGTGGATGTGAGCTCGGAGGATGAGTCTTCGAAAATGCATGAATTGAGTGGTAAAAGAATGAAAATGGGGGAATCCAGAGATGAGAATGGTGGTGCGAAAGCTGAAGAAACAAGCTCAGCTAATGGTAACAAACCCGGCGAACCAATCTCTAAAACATTGGAGCCACCTAAAGATTATATTCACGTGAGAGCGAGGAGAGGCCAAGCTACCGATAGCCACAGTCTGGCAGAACGAGCTAGGAGAGAGAAAATTAGTGAGAGAATGAAAATCCTTCAAGACTTGGTTCCAGGATGTAATAAGGTTATTGGAAAGGCACTCGTTCTCGATGAGATTATCAATTACATTCAATCCTTGCAGCGTCAGGTCGAGTTTCTGTCGATGAAGCTTGAAGCAGTTAATTCAAGAATAAACAGGAACCCAGGCAATGAAGGCTATACTACCAACGATAATGGAACCCAGGAATTTGATGCTGCAGGAATGATACATGGTTCCCAAGCAATACCAAGAGAATATGGTCAAGGTCAAGGCTTACAACCTGAATGGCTCCATATGCAAATTGGTGGTGCTGGTTTTGAAAGAGCAAATTAA | 819 | 47.13 | MDPPLVNESSFSAANPSAYSLAEIWPFSGASDGVLGLRTGNLGRNNGGLAEGSGNRDGSAEESTVTGQSGGGGKRKRVDVSSEDESSKMHELSGKRMKMGESRDENGGAKAEETSSANGNKPGEPISKTLEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRINRNPGNEGYTTNDNGTQEFDAAGMIHGSQAIPREYGQGQGLQPEWLHMQIGGAGFERAN | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11510494 | 11513106 | + | Bpe005831.1 | Bpe12g00567 | 112580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00567 | 272 | Coils | Coil | 192 | 212 | - | - | |
Bpe12g00567 | 272 | Gene3D | - | 142 | 217 | IPR036638 | GO:0046983 | |
Bpe12g00567 | 272 | PANTHER | MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 270 | - | - | |
Bpe12g00567 | 272 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 1 | 270 | IPR024097 | GO:0006355 | |
Bpe12g00567 | 272 | SMART | finulus | 151 | 201 | IPR011598 | GO:0046983 | |
Bpe12g00567 | 272 | MobiDBLite | consensus disorder prediction | 30 | 133 | - | - | |
Bpe12g00567 | 272 | MobiDBLite | consensus disorder prediction | 76 | 110 | - | - | |
Bpe12g00567 | 272 | CDD | bHLH_AtBPE_like | 135 | 217 | - | - | |
Bpe12g00567 | 272 | Pfam | Helix-loop-helix DNA-binding domain | 149 | 196 | IPR011598 | GO:0046983 | |
Bpe12g00567 | 272 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 145 | 195 | IPR011598 | GO:0046983 | |
Bpe12g00567 | 272 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 143 | 213 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe07g00808 | Bpe12g00567 | CCT | |
Bpe07g00808 | Bpe12g00567 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe12g00567 | Bpe-Chr12:11510494 | Bpe13g00756 | Bpe-Chr13:14089584 | 1.18E-46 | dispersed | |
Bpe12g00567 | Bpe-Chr12:11510494 | Bpe13g00471 | Bpe-Chr13:12200788 | 1.57E-74 | wgd | |
Bpe12g00567 | Bpe-Chr12:11510494 | Bpe07g00808 | Bpe-Chr7:14414093 | 5.09E-143 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22217 | PF00010 | HLH | 2.20E-08 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00567 | - | - | zju:107418528 | 351.288 |