Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00570 | ATGGTGTCTTCCTCTTCTCAGAAGAAAACCTTCCATTCTCTCCTCGCTTCCAACCTCACAAAGCTTACTATCCCTGCTTCTTCTTCTTCTTCTTCCCCATCTTCTTCCTCGGCTACCACCCACCACGACTTCGAGTTTTCCGACCTTTTTGGCCCTCCCGTCTCCTCCCCATCCGCTTCCTCCTCATTCCAGAGAGATCCACTACAACCTCAGCTGCAAGTGATTCATAATCGATCCCATTCCTTTGTCGGTCCCTCTCCTCGCTTCGCTCCTTCCTCGTCACTCCCCCTTCACCGGGAACTTGTTTCGCAGAGTGAGGAGGAAGACGGTGAAGAAGCAGATGATGAAATTCCAGTTATTAATGGAGCTCTAAATGATGAGAGAAAGAATGAAATCCAGAACAGTGATGGAAATAAAGTGGTGGGTAAGATCGGGCCTGCCGATTTTGAGATTCTTAGAGTTGTCGGTAAGGGTGCGTTTGGAAAGGTCTTTCTGGTGAAGAAGACGGTGGACGATAGTGGAGATAGTGATGGGATTTACGCAATGAAAGTGATGAGAAAGGACACTATTATAAAGAAGAATCATGTTGATTATATGAAGGCTGAGAGAGACATTCTTACCAAAGTTGTGCATCCCTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAAGCAAAGCTCTATTTGATTCTCGATTTCATAAATGGAGGGCATCTCTTCTTTCATCTCTACCGACAGGGCCTTTTCAGTGAGGACCAGGCAAGGATGTATACTGCAGAGATTGTATCTGCTGTTTCACATCTGCACAGTTGTGGAATTGTGCATCGGGATCTCAAGCCTGAAAATATTCTAGTTGATTCAGACGGGCATGTTATGCTAACAGACTTTGGGCTTGCCAAGGAAATTGATGAATCAAGCAGGTCAAATTCATTGTGCGGAACGACAGAGTACATGGCTCCCGAAATTTTACTGAATAAAGGGCACAACAAAGATGCTGATTGGTGGAGTGTCGGGATACTCTTATACGAAATGCTTTCTGGGCAGCCTCCATTTACACATTCAAATAGGAAGAAGCTTCAAGAGAAAATTATCAAAGACAAAGTGAAACTTCCACCTTATCTCAGCAGTGAAGCACACTCTTTACTTAAAGGACTACTTCAAAAGGAACCATCGAACAGATTAGGAAGTGGGTCAAATGGAGCAGATAAGATAAAAAGTCATAAATGGTTTCAACCAATCAACTGGAAGAAATTGGAGGCCAGAGAAATGCAACCGAAGTTCAAGCCCGATGTAACCGGAAAAGATTGTACAGCCAATTTCGACCGCTGCTGGACGGTAATGCCTCCGGATGACTCACCAGCTCCAACACCAACTTCAGATGAACATTTCCAGGGATATACTTATGTTGCTCCTAATCCTTGGCTTTCTTCATCGGGGTAA | 1440 | 44.58 | MVSSSSQKKTFHSLLASNLTKLTIPASSSSSSPSSSSATTHHDFEFSDLFGPPVSSPSASSSFQRDPLQPQLQVIHNRSHSFVGPSPRFAPSSSLPLHRELVSQSEEEDGEEADDEIPVINGALNDERKNEIQNSDGNKVVGKIGPADFEILRVVGKGAFGKVFLVKKTVDDSGDSDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKAKLYLILDFINGGHLFFHLYRQGLFSEDQARMYTAEIVSAVSHLHSCGIVHRDLKPENILVDSDGHVMLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLNKGHNKDADWWSVGILLYEMLSGQPPFTHSNRKKLQEKIIKDKVKLPPYLSSEAHSLLKGLLQKEPSNRLGSGSNGADKIKSHKWFQPINWKKLEAREMQPKFKPDVTGKDCTANFDRCWTVMPPDDSPAPTPTSDEHFQGYTYVAPNPWLSSSG | 479 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11520406 | 11523462 | + | Bpe005834.1 | Bpe12g00570 | 112583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00570 | 479 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 6 | 477 | - | - | |
Bpe12g00570 | 479 | Pfam | Protein kinase domain | 149 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00570 | 479 | MobiDBLite | consensus disorder prediction | 24 | 67 | - | - | |
Bpe12g00570 | 479 | Pfam | Protein kinase C terminal domain | 431 | 468 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe12g00570 | 479 | ProSiteProfiles | Protein kinase domain profile. | 149 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00570 | 479 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 429 | - | - | |
Bpe12g00570 | 479 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 453 | - | - | |
Bpe12g00570 | 479 | SMART | pkinase_C_6 | 411 | 470 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe12g00570 | 479 | SMART | serkin_6 | 149 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00570 | 479 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
Bpe12g00570 | 479 | SUPERFAMILY | Protein kinase-like (PK-like) | 148 | 473 | IPR011009 | - | |
Bpe12g00570 | 479 | MobiDBLite | consensus disorder prediction | 24 | 43 | - | - | |
Bpe12g00570 | 479 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 6 | 477 | - | - | |
Bpe12g00570 | 479 | MobiDBLite | consensus disorder prediction | 101 | 128 | - | - | |
Bpe12g00570 | 479 | ProSitePatterns | Protein kinases ATP-binding region signature. | 155 | 183 | IPR017441 | GO:0005524 | |
Bpe12g00570 | 479 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 273 | 285 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe12g00570 | 479 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 411 | 478 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00975 | Bpe-Chr3:29275513 | Bpe12g00570 | Bpe-Chr12:11520406 | 3.70E-160 | dispersed | |
Bpe04g01652 | Bpe-Chr4:22632703 | Bpe12g00570 | Bpe-Chr12:11520406 | 1.85E-64 | dispersed | |
Bpe04g01911 | Bpe-Chr4:24079830 | Bpe12g00570 | Bpe-Chr12:11520406 | 1.16E-66 | dispersed | |
Bpe12g00570 | Bpe-Chr12:11520406 | Bpe12g00646 | Bpe-Chr12:12105926 | 1.68E-62 | dispersed | |
Bpe12g00570 | Bpe-Chr12:11520406 | Bpe04g01311 | Bpe-Chr4:19547159 | 5.35E-175 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63632 | PF00069 | Pkinase | 5.40E-74 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00570 | K04688 | - | csv:101214867 | 712.22 |