Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00577 ATGGCAATTCCGATACCCAGTAGACAGCTTTTCATCGACGGAGAATGGAGAGAACCAGTTCTTAAGAAACGCATCCCCATCATCAATCCTGCCACTGAAGAAATCATCGGTATCTCTCTCTCTCTCTCTGTGAGAAGTTTTATGGGTCAGTCTATGATTTGTGCTTTAGGGGATATTCCTGCAGCAACTGCAGAGGATGTAGAGCTAGCTGTAAATGCAGCCAGGAGAGCCCTTGCCAAAAACCAAGGGGGTGAATGGGCCTCTTCTTCTGGAGCTGTTCGCTCAAAGTATTTGCGCGCCATCGCTGCCAAGGTAGTGGAGAAGAAATCTGAACTGGCAAAGCTCGAAGCAATTGATTGTGGAAAACCTCTGGATGAAGCTGCCTGGGATATGGATGATGTAGCTGGGTGTTTTGAGTACTACGCAGACCTTGCTGAAGGTTTGGATGCCAAGCAAAAGGCACCACTTTCCCTTCCTATGGATTCATTCAAGAGCTATGTTCTCAAGGAACCCATTGGAGTGGTTGGGTTGATTACTCCATGGAACTATCCTCTACTGATGGCTGCATGGAAAGTGGCTCCTGCATTGGCTGCTGGATGTGCTGCAATTCTCAAGCCATCGGAATTGGCTTCTGTGACTTGTTTGGAACTGGCTGAAATATGTAACAGTATCGGCCTTCCTCGTGGCGTTCTCAATGTTTTAACTGGAAACGGTCCTGAAGCCGGTGCTCCTTTGGCTTCGCATCCGCACGTTGACAAGATTGCATTTACAGGAAGCACCTCTACAGGGAGCAAGATTATGTCTGCTGCAGCTCAAGTGGTCAAGCCTGTTACACTGGAGCTTGGTGGAAAGAGTCCGATTCTTGTTTTTGAGGACGTTGACTTGGATAAAGCTGCTGAATGGACTGCCTTCGGTTGCTTTTGGACTAATGGTCAGATTTGTAGTGCAACTTCTCGTCTTCTTGTACAAGAAAGCATTGCCCATGATTTTTTGGACAACCTGGTACAATGGTGCAGAAATATTAAAATATCAGATCCTCTGGAAGATGGTTGTCGGCTTGGTCCTGTTGTTAGTAAAGGACAGTATGAGAAAGTATTGAAGTTCATCTCAACCGCCGAGAGTGAAGGTGCAACTATTTTATCGGGTGGGGGTCGTCCGGAGCATCTCAAAAAAGGATTCTTCATTGAACCAACCATCATAAATGGTGTGACTACATCTATGCAAATCTGGAGAGAAGAAGTTTTCGGACCTGTAATTTGTGTCAAAACGTTTAAAACTGAAGATGAAGCAATTGAATTAGCTAATGATAGCCATTATGGGTTAGGTTCGGCTGTGATCTCAAATGACTTAGAAAGGTGTGAGCGGATTTCGAAGGCTTTGCAGGCAGGAATTGTGTGGATCAATTGCTCGCAGCCGTGTTTCTGTCAAGCCCCATGGGGAGGCACCAAGCGTAGTGGTTTTGGTCGTGAATTAGGCGAATGGGGACTGGATAATTATGTGAGCGTGAAGCAGGTTACTCAGTATGTGTCCAGTGAGCCATGGGGATGGTATCAGTCTCCTTCGTCTTCAAAACTCTGA 1578 46.2 MAIPIPSRQLFIDGEWREPVLKKRIPIINPATEEIIGISLSLSVRSFMGQSMICALGDIPAATAEDVELAVNAARRALAKNQGGEWASSSGAVRSKYLRAIAAKVVEKKSELAKLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEGLDAKQKAPLSLPMDSFKSYVLKEPIGVVGLITPWNYPLLMAAWKVAPALAAGCAAILKPSELASVTCLELAEICNSIGLPRGVLNVLTGNGPEAGAPLASHPHVDKIAFTGSTSTGSKIMSAAAQVVKPVTLELGGKSPILVFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVQESIAHDFLDNLVQWCRNIKISDPLEDGCRLGPVVSKGQYEKVLKFISTAESEGATILSGGGRPEHLKKGFFIEPTIINGVTTSMQIWREEVFGPVICVKTFKTEDEAIELANDSHYGLGSAVISNDLERCERISKALQAGIVWINCSQPCFCQAPWGGTKRSGFGRELGEWGLDNYVSVKQVTQYVSSEPWGWYQSPSSSKL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11564836 11569758 - Bpe005840.1 Bpe12g00577 112590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00577 525 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 56 520 - -
Bpe12g00577 525 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 37 - -
Bpe12g00577 525 CDD ALDH_F10_BADH 27 507 - -
Bpe12g00577 525 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 307 318 IPR016160 GO:0016491
Bpe12g00577 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 478 IPR016163 GO:0016620
Bpe12g00577 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 503 IPR016162 GO:0016491
Bpe12g00577 525 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 56 520 - -
Bpe12g00577 525 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 37 - -
Bpe12g00577 525 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 279 286 IPR029510 GO:0016491
Bpe12g00577 525 SUPERFAMILY ALDH-like 6 506 IPR016161 GO:0016491
Bpe12g00577 525 Pfam Aldehyde dehydrogenase family 56 505 IPR015590 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00817 Bpe12g00577 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00577 Bpe-Chr12:11564836 Bpe12g00589 Bpe-Chr12:11666187 1.47E-117 dispersed
Bpe12g00577 Bpe-Chr12:11564836 Bpe13g00279 Bpe-Chr13:10685412 7.26E-11 wgd
Bpe12g00577 Bpe-Chr12:11564836 Bpe07g00817 Bpe-Chr7:14464866 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00577 K00130 - jre:108999250 887.486