Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00579 ATGGTCGGCGGCTGCGATGCGTCGGCCCTCATTTCTTCCAACTTATTTAATAAAGCCGAAAGAGACTCCGACAGCAACCTCTCTCTCCCTGGCGACGCCTTCGACGTCATCGTCCGAGCTAAAACCACCCTCGAGCTCACCTGCCCCGGCATCGTCTCGTGCTCCGACATTCTGGCGCAGTCCACCCGCGACCTCGTCACCATGGTAGGAGGTCCATTTTACAAAGTTCGGCTAGGTCGGAAGGATGGATTGGTTTCTCAGGCCACCAGAGTCGAGTCAAATCTCCCCCACACTGACCAAACTGTAGACAACCTGATAAAATACTTCGCAGCGAAAGGGTTCACCATCAGAGAATTCGTAGCTCTCTCCGGTGCCCACACCATTGGGTTCTCCCACTGCAAAGAATTCTCCAATCGGTTATTCCGTTACAGCAAAACCGCGAAAACCGATCCCTCAATGCACCCGAAGTTCGCCGGAGCTTTGAAGACAATGTGTGCAAACTACACCGTCGACCCTGAGATGTCGGCTTTTAACGACGTAATGACGCCGGGAAAATTTGACAACATGTACTACCAGAATTTGTTAAAAGGGCTAGGTCTCTTAGCCTCCGATCAAGCTCTGACAAAAGACCCGAGGACGAGGCCGTTCGTGGAGTACTACGCGGCGGATCAGGCGGCGTTCTTTAAAGACTTCTCACAGGCAATGGAAAAGCTTAGTGTCTACGGCATCAAAACTGGCCGGAAAGGAGAAGTGAGGCGGAGGTGCGAGCAGTTCAATAGAATCCAGACTTGA 792 52.27 MVGGCDASALISSNLFNKAERDSDSNLSLPGDAFDVIVRAKTTLELTCPGIVSCSDILAQSTRDLVTMVGGPFYKVRLGRKDGLVSQATRVESNLPHTDQTVDNLIKYFAAKGFTIREFVALSGAHTIGFSHCKEFSNRLFRYSKTAKTDPSMHPKFAGALKTMCANYTVDPEMSAFNDVMTPGKFDNMYYQNLLKGLGLLASDQALTKDPRTRPFVEYYAADQAAFFKDFSQAMEKLSVYGIKTGRKGEVRRRCEQFNRIQT 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11581470 11582261 - Bpe005842.1 Bpe12g00579 112592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00579 263 Pfam Peroxidase 1 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PANTHER - 1 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Haem peroxidase superfamily signature 52 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Haem peroxidase superfamily signature 70 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 ProSiteProfiles Plant heme peroxidase family profile. 1 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 Gene3D Peroxidase, domain 2 96 238 - -
Bpe12g00579 263 PANTHER PEROXIDASE 41 1 263 - -
Bpe12g00579 263 Gene3D - 2 259 - -
Bpe12g00579 263 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 32 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 193 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 233 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 51 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 PRINTS Plant peroxidase signature 70 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe12g00579 263 CDD secretory_peroxidase 2 255 IPR033905 GO:0004601|GO:0042744
Bpe12g00579 263 SUPERFAMILY Heme-dependent peroxidases 2 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00579 Bpe-Chr12:11581470 Bpe15g00305 Bpe-Chr15:14535375 3.80E-78 dispersed
Bpe15g00817 Bpe-Chr15:18301489 Bpe12g00579 Bpe-Chr12:11581470 1.67E-19 dispersed
Bpe12g00751 Bpe-Chr12:13007450 Bpe12g00579 Bpe-Chr12:11581470 4.50E-168 transposed
Bpe12g00579 Bpe-Chr12:11581470 Bpe14g00206 Bpe-Chr14:2315096 1.38E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00579 K00430 - twl:120008110 407.527