Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00581 GTTCATAGGAATAGGGAGACTACTGTAAAGGCGATGGATTTGTCTGAGTCCCAATGCTTGAAGTTACAGTTCGTCAACAACCTATCTCTTCCAGTATTTACTGGAGCTCGAATCGAAGGGGTTGATGGATCTTCCTTGAAAGTTACTATGGTTAATGCTATTAGTGGGAAATATGTCACCTCTGGCCCTGAATCATCCGCCAAGGTGGAAATTGTAGTTCTCGAGGGCGATTTTGATGGTGAAGATGGTGATAATTGGACGAGTGAAGAGTTTAAAAATAATGTCATCAGAGAAAGAGAAGGAAAGAAACCAATTCTCACTGGAGACGTATTTCTGAATCTGAAAGACGGTGTTGGTTCAATTAGTGACATTTCTTTCACGGATAATTCTAGCTGGACAAGGAGCCGAAGATTTAGATTGGGTGCCAGAGTTGTAGATAGTGTTGATGGAATTAGTGTAAGAGAAGCAAAGTCAGAATCCTTTGTCGTGAGGGATCATCGGGGTGAATTGTACAAGAAACACCATCCTCCCCTTCTGATCGATGAAGTATGGAGACTTGAAAAAATTGGCAAAGATGGAGCTTTTCACAGGAGATTGTGCAGGGAAAACATAGTTACCGTCAAGGATTTCCTAACCCTTCTCTTCCTTGATCCTCAAAGGCTTCGAAATATCCTTGGGACCGGCATGTCTGCCAAGATGTGGGACATAACTATTGAGCATGCTAGGACATGTGTAATTGATAAGAAGAAATACTTGTACAGAGGTGTGGTTTTTAACGTGGTTGGCCAACATTCTCTATTTTTATTTTCCTTAATATTGACAAAAATGCTCCATTCTCAGATTGATGCAACAATCTTAGTTCTGTCTGCATTTGAGCACTGGGGAGAAGTAGTTTCTATTGGAGATGAAGTTCTTCATGAAGCCGAGTCTTCTCAGTTAGTCAGTGGTGTCTGCTGCTCTAGCTCACCCACCATGGAGGGTTGCAGTGGGAGTATCATTTTGCCTACTCATCCTCAAACAGATGGCGGGTTTGACTATGCCCAACCAGGCGCCTTTTCTCCTGAAATTAACTTGCCAATATGTTCGGTTGGGATAGGCAGTGGCTTGGATGATTATATTCTTCAGAATATCGATGAAATGGGTCTCAGGTTTTACCAAACTTCAAATTTCCCCAACCTAGTTGATTCCTTGATAGGGAATTCTGAGCCCTTGAATCAAATTTTCTATCCAGATGATCATATGCAGTTTTTCGAACCTGATCTTCACCACAACTTCAACTTTAAATCACAGGCCGAAAATTCTCAACTTGTGGAGAAACTGCATCCGTGGCAGCGTGCTAAGATTAGATGGACAAAGCTATTTAGTGTGCTCAAATGGTTTTCAATCCGGAGAATGGTATCAAAGAGGCCCCGCCTTCCAGGGAACAAGCGACACCGAGTGGAGTTACATGAAGTTGATTAA 1461 42.23 VHRNRETTVKAMDLSESQCLKLQFVNNLSLPVFTGARIEGVDGSSLKVTMVNAISGKYVTSGPESSAKVEIVVLEGDFDGEDGDNWTSEEFKNNVIREREGKKPILTGDVFLNLKDGVGSISDISFTDNSSWTRSRRFRLGARVVDSVDGISVREAKSESFVVRDHRGELYKKHHPPLLIDEVWRLEKIGKDGAFHRRLCRENIVTVKDFLTLLFLDPQRLRNILGTGMSAKMWDITIEHARTCVIDKKKYLYRGVVFNVVGQHSLFLFSLILTKMLHSQIDATILVLSAFEHWGEVVSIGDEVLHEAESSQLVSGVCCSSSPTMEGCSGSIILPTHPQTDGGFDYAQPGAFSPEINLPICSVGIGSGLDDYILQNIDEMGLRFYQTSNFPNLVDSLIGNSEPLNQIFYPDDHMQFFEPDLHHNFNFKSQAENSQLVEKLHPWQRAKIRWTKLFSVLKWFSIRRMVSKRPRLPGNKRHRVELHEVD 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11587717 11589646 + Bpe005844.1 Bpe12g00581 112594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00581 486 PANTHER CALMODULIN-BINDING PROTEIN 60 A 9 468 - -
Bpe12g00581 486 Pfam Calmodulin binding protein central domain 179 244 IPR046830 -
Bpe12g00581 486 PANTHER OS02G0177800 PROTEIN 9 468 IPR012416 GO:0005516
Bpe12g00581 486 Pfam Calmodulin binding protein-like N-terminal domain 20 166 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00581 Bpe15g00529 CCT
Bpe12g00581 Bpe13g00259 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02147 Bpe-Chr2:22790159 Bpe12g00581 Bpe-Chr12:11587717 4.63E-72 dispersed
Bpe12g00581 Bpe-Chr12:11587717 Bpe13g01208 Bpe-Chr13:17426729 1.10E-93 dispersed
Bpe12g00581 Bpe-Chr12:11587717 Bpe13g00259 Bpe-Chr13:10548626 2.36E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00581 - - fve:101299477 537.724