Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00588 | AAAATGAATAGCGTTCATTTCTACACTCCCTCGACCTCCTTGCGCCGGTTCCCGAAATCCTTCTCACTGCGGAAGAAGGTTCCTCGGTGGTCCCAAATTCTCGAACCGGATTCTGAATTCGTAACCAAATGGAACTATGTCTTCCTCGTTACCTGTCTCATCGCCCTCTTTCTCGACCCACTATACTTCTACCTCCCCGCCATCGGGGGCCCCGCCTGTATGCAGATCGACATTCGCCTCGGAATTCTCGTCACCTTCTTCCGAACCGTCGCCGACCTGTTCTACCTCTTCAACATGATCATGAAATTCCGGACGGCGTTTGTCGCGCCGAGCTCTAGGGTTTTCGGACGGGGTGAGCTCGTGATGGATCCCAAGGCGATCGCAGCCCGATACCTCAAGTCGAATTTTGTAATCGATCTTGCCGCAACACTTCCCCTACCACAGATTGTGATCTGGTTTGTGATTCCGGCGGTAAAAAGCCCGACAGCTGCGAATGCTAACCACACTCTAGCTCTAATCGTACTCATCCAATATACGCCTCGTTTGTTCCTCATTTTCCCGTTAAACCAACGAATCAACAAAACTACCGGAGCAATAGCCAAGACCGCTTGGGTCGGAGCTGCCTATAATCTCCTCCTCTACATGTTGGCCAGTCACGTTATCGGAGCAGCGTGGTACGTGGCGTCGATTCAACGGCAGCACGAGTGTTGGAAAATAGAATGTAAAAAGGAGATGAACACCACACACTCTCCATCGTGTGTTTTGTTTTTTCTCGATTGCGATAGTTTGAACGAGCCGGAACGGCGCGCTTGGCTGGGAATCACTCATGTACTTACCAACTGCGATGCTTCAAAAGACGATCAAAACTTTCAGTTCGGAATGTTTGCAGATGCTTTCACTGATGATGTTGCCTCCTCGCACTTTATTGAGAAATACTTCTATTGCCTTTGGTGGGGTTTGAAGAATTTAAGTTCATATGGACAAAACATAATGACAAGCACATTCAGCGGCGAAACGCTGTTTAGCATTGTGATTTGCTCGTTGGGTCTGGTTCTTTTTTCGCATCTAATCGGCCAAGTTCAGAACTACCTTCAATCTTCCACGGCTAGACTCGAAGAATGGAGGGTCAAACGGAAAGATACCGAGGAATGGATGAGGCATCGACAACTTCCACCCGAGTTACAAGAACGAATTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTAGACGAAGAATCGATTTTACGTGCTTTGCCTTTAGACCTCAAACGCCAAATTCAAAGACATCTTTGTCTCGCACTTGTTCGCCGTGTTCCATTTTTTGCACAGATGGATGATCAGCTTCTGGACGCCATATGCGAGAGGTTAGTTTCTTCATTGAACACCAAAGACACGTTCATAACCCGAGAAGGTGATCCCGTGAACGAAATGCTTTTCGTCATTCGAGGGCAGCTCGAGAGCTCGACCACCAATGGCGGAAGGTCGGGATTCTTCAACTGCATCACCCTCCGACCGGGAGATTTCTGCGGCGAAGAGCTGCTGACATGGGCGCTGATTCCCTCCTCAAACGTGAGCCTTCCTTCCTCGACCCGGACCGTAAAATCTCTCACCGAAGTCGAAGCCTTCGCCCTCAGAGCGGAAGATCTCAAGTTCGTAGCGAGCCAATTCAAGCGGCTGCACAGCAAGAAACTGCAGCACGCCTTTCGATACTACTCTCATCAATGGCGGACGTGGGGAGCTTGCTTTATTCAAGCTGCATGGAGGCGACAGGTCAAGAGGAAGCTGGCGATGGAGCTGGCCCGGCAGGAGGAGGCATACTATTCGTCTGTTCTGGACCAAGAAGATGACAGCAAACGAAGTGAACTTTCTGGAGAGTTAGACGATGAAGATGGGGAGAGTTCAAGCAGATCTCAGCATTTGGGAGCCATTGTTTTTGCTTCGAAAGTTGCAGCAAATACCAGAAGAGGAGGAGGTAAGGGTAAGGGTAAGGTTTCTGTGCTTAACCCAGATGCTGCTAGCTTGAAGATGCCCAAGCTGTTGAAGCCAGAGGAGCCTGATTTTTCTTCATTCTCTGAAAATCAACCCTAG | 2097 | 49.17 | KMNSVHFYTPSTSLRRFPKSFSLRKKVPRWSQILEPDSEFVTKWNYVFLVTCLIALFLDPLYFYLPAIGGPACMQIDIRLGILVTFFRTVADLFYLFNMIMKFRTAFVAPSSRVFGRGELVMDPKAIAARYLKSNFVIDLAATLPLPQIVIWFVIPAVKSPTAANANHTLALIVLIQYTPRLFLIFPLNQRINKTTGAIAKTAWVGAAYNLLLYMLASHVIGAAWYVASIQRQHECWKIECKKEMNTTHSPSCVLFFLDCDSLNEPERRAWLGITHVLTNCDASKDDQNFQFGMFADAFTDDVASSHFIEKYFYCLWWGLKNLSSYGQNIMTSTFSGETLFSIVICSLGLVLFSHLIGQVQNYLQSSTARLEEWRVKRKDTEEWMRHRQLPPELQERIRRFVQYKWIATRGVDEESILRALPLDLKRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFITREGDPVNEMLFVIRGQLESSTTNGGRSGFFNCITLRPGDFCGEELLTWALIPSSNVSLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRQVKRKLAMELARQEEAYYSSVLDQEDDSKRSELSGELDDEDGESSSRSQHLGAIVFASKVAANTRRGGGKGKGKVSVLNPDAASLKMPKLLKPEEPDFSSFSENQP | 698 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11659486 | 11662643 | + | Bpe005851.1 | Bpe12g00588 | 112601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00588 | 698 | Pfam | Ion transport protein | 44 | 370 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Bpe12g00588 | 698 | SUPERFAMILY | Voltage-gated potassium channels | 36 | 365 | - | - | |
Bpe12g00588 | 698 | Gene3D | Helix hairpin bin | 369 | 434 | - | - | |
Bpe12g00588 | 698 | SUPERFAMILY | cAMP-binding domain-like | 372 | 568 | IPR018490 | - | |
Bpe12g00588 | 698 | MobiDBLite | consensus disorder prediction | 619 | 642 | - | - | |
Bpe12g00588 | 698 | CDD | CAP_ED | 443 | 574 | IPR000595 | - | |
Bpe12g00588 | 698 | SMART | cnmp_10 | 443 | 574 | IPR000595 | - | |
Bpe12g00588 | 698 | Gene3D | - | 47 | 367 | - | - | |
Bpe12g00588 | 698 | Gene3D | Jelly Rolls | 441 | 561 | IPR014710 | - | |
Bpe12g00588 | 698 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 6 | 693 | - | - | |
Bpe12g00588 | 698 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED | 6 | 693 | - | - | |
Bpe12g00588 | 698 | MobiDBLite | consensus disorder prediction | 676 | 698 | - | - | |
Bpe12g00588 | 698 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 443 | 573 | IPR000595 | - | |
Bpe12g00588 | 698 | Pfam | Cyclic nucleotide-binding domain | 466 | 554 | IPR000595 | - | |
Bpe12g00588 | 698 | MobiDBLite | consensus disorder prediction | 619 | 638 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe07g01072 | Bpe12g00588 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe09g00487 | Bpe-Chr9:13357648 | Bpe12g00588 | Bpe-Chr12:11659486 | 0 | dispersed | |
Bpe10g00594 | Bpe-Chr10:12858504 | Bpe12g00588 | Bpe-Chr12:11659486 | 0 | dispersed | |
Bpe12g00588 | Bpe-Chr12:11659486 | Bpe12g00381 | Bpe-Chr12:9134036 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00588 | K05391 | - | csv:101209760 | 1083.55 |