Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00588 AAAATGAATAGCGTTCATTTCTACACTCCCTCGACCTCCTTGCGCCGGTTCCCGAAATCCTTCTCACTGCGGAAGAAGGTTCCTCGGTGGTCCCAAATTCTCGAACCGGATTCTGAATTCGTAACCAAATGGAACTATGTCTTCCTCGTTACCTGTCTCATCGCCCTCTTTCTCGACCCACTATACTTCTACCTCCCCGCCATCGGGGGCCCCGCCTGTATGCAGATCGACATTCGCCTCGGAATTCTCGTCACCTTCTTCCGAACCGTCGCCGACCTGTTCTACCTCTTCAACATGATCATGAAATTCCGGACGGCGTTTGTCGCGCCGAGCTCTAGGGTTTTCGGACGGGGTGAGCTCGTGATGGATCCCAAGGCGATCGCAGCCCGATACCTCAAGTCGAATTTTGTAATCGATCTTGCCGCAACACTTCCCCTACCACAGATTGTGATCTGGTTTGTGATTCCGGCGGTAAAAAGCCCGACAGCTGCGAATGCTAACCACACTCTAGCTCTAATCGTACTCATCCAATATACGCCTCGTTTGTTCCTCATTTTCCCGTTAAACCAACGAATCAACAAAACTACCGGAGCAATAGCCAAGACCGCTTGGGTCGGAGCTGCCTATAATCTCCTCCTCTACATGTTGGCCAGTCACGTTATCGGAGCAGCGTGGTACGTGGCGTCGATTCAACGGCAGCACGAGTGTTGGAAAATAGAATGTAAAAAGGAGATGAACACCACACACTCTCCATCGTGTGTTTTGTTTTTTCTCGATTGCGATAGTTTGAACGAGCCGGAACGGCGCGCTTGGCTGGGAATCACTCATGTACTTACCAACTGCGATGCTTCAAAAGACGATCAAAACTTTCAGTTCGGAATGTTTGCAGATGCTTTCACTGATGATGTTGCCTCCTCGCACTTTATTGAGAAATACTTCTATTGCCTTTGGTGGGGTTTGAAGAATTTAAGTTCATATGGACAAAACATAATGACAAGCACATTCAGCGGCGAAACGCTGTTTAGCATTGTGATTTGCTCGTTGGGTCTGGTTCTTTTTTCGCATCTAATCGGCCAAGTTCAGAACTACCTTCAATCTTCCACGGCTAGACTCGAAGAATGGAGGGTCAAACGGAAAGATACCGAGGAATGGATGAGGCATCGACAACTTCCACCCGAGTTACAAGAACGAATTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTAGACGAAGAATCGATTTTACGTGCTTTGCCTTTAGACCTCAAACGCCAAATTCAAAGACATCTTTGTCTCGCACTTGTTCGCCGTGTTCCATTTTTTGCACAGATGGATGATCAGCTTCTGGACGCCATATGCGAGAGGTTAGTTTCTTCATTGAACACCAAAGACACGTTCATAACCCGAGAAGGTGATCCCGTGAACGAAATGCTTTTCGTCATTCGAGGGCAGCTCGAGAGCTCGACCACCAATGGCGGAAGGTCGGGATTCTTCAACTGCATCACCCTCCGACCGGGAGATTTCTGCGGCGAAGAGCTGCTGACATGGGCGCTGATTCCCTCCTCAAACGTGAGCCTTCCTTCCTCGACCCGGACCGTAAAATCTCTCACCGAAGTCGAAGCCTTCGCCCTCAGAGCGGAAGATCTCAAGTTCGTAGCGAGCCAATTCAAGCGGCTGCACAGCAAGAAACTGCAGCACGCCTTTCGATACTACTCTCATCAATGGCGGACGTGGGGAGCTTGCTTTATTCAAGCTGCATGGAGGCGACAGGTCAAGAGGAAGCTGGCGATGGAGCTGGCCCGGCAGGAGGAGGCATACTATTCGTCTGTTCTGGACCAAGAAGATGACAGCAAACGAAGTGAACTTTCTGGAGAGTTAGACGATGAAGATGGGGAGAGTTCAAGCAGATCTCAGCATTTGGGAGCCATTGTTTTTGCTTCGAAAGTTGCAGCAAATACCAGAAGAGGAGGAGGTAAGGGTAAGGGTAAGGTTTCTGTGCTTAACCCAGATGCTGCTAGCTTGAAGATGCCCAAGCTGTTGAAGCCAGAGGAGCCTGATTTTTCTTCATTCTCTGAAAATCAACCCTAG 2097 49.17 KMNSVHFYTPSTSLRRFPKSFSLRKKVPRWSQILEPDSEFVTKWNYVFLVTCLIALFLDPLYFYLPAIGGPACMQIDIRLGILVTFFRTVADLFYLFNMIMKFRTAFVAPSSRVFGRGELVMDPKAIAARYLKSNFVIDLAATLPLPQIVIWFVIPAVKSPTAANANHTLALIVLIQYTPRLFLIFPLNQRINKTTGAIAKTAWVGAAYNLLLYMLASHVIGAAWYVASIQRQHECWKIECKKEMNTTHSPSCVLFFLDCDSLNEPERRAWLGITHVLTNCDASKDDQNFQFGMFADAFTDDVASSHFIEKYFYCLWWGLKNLSSYGQNIMTSTFSGETLFSIVICSLGLVLFSHLIGQVQNYLQSSTARLEEWRVKRKDTEEWMRHRQLPPELQERIRRFVQYKWIATRGVDEESILRALPLDLKRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFITREGDPVNEMLFVIRGQLESSTTNGGRSGFFNCITLRPGDFCGEELLTWALIPSSNVSLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRQVKRKLAMELARQEEAYYSSVLDQEDDSKRSELSGELDDEDGESSSRSQHLGAIVFASKVAANTRRGGGKGKGKVSVLNPDAASLKMPKLLKPEEPDFSSFSENQP 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11659486 11662643 + Bpe005851.1 Bpe12g00588 112601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00588 698 Pfam Ion transport protein 44 370 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe12g00588 698 SUPERFAMILY Voltage-gated potassium channels 36 365 - -
Bpe12g00588 698 Gene3D Helix hairpin bin 369 434 - -
Bpe12g00588 698 SUPERFAMILY cAMP-binding domain-like 372 568 IPR018490 -
Bpe12g00588 698 MobiDBLite consensus disorder prediction 619 642 - -
Bpe12g00588 698 CDD CAP_ED 443 574 IPR000595 -
Bpe12g00588 698 SMART cnmp_10 443 574 IPR000595 -
Bpe12g00588 698 Gene3D - 47 367 - -
Bpe12g00588 698 Gene3D Jelly Rolls 441 561 IPR014710 -
Bpe12g00588 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 693 - -
Bpe12g00588 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 6 693 - -
Bpe12g00588 698 MobiDBLite consensus disorder prediction 676 698 - -
Bpe12g00588 698 ProSiteProfiles cAMP/cGMP binding motif profile. 443 573 IPR000595 -
Bpe12g00588 698 Pfam Cyclic nucleotide-binding domain 466 554 IPR000595 -
Bpe12g00588 698 MobiDBLite consensus disorder prediction 619 638 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g01072 Bpe12g00588 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00487 Bpe-Chr9:13357648 Bpe12g00588 Bpe-Chr12:11659486 0 dispersed
Bpe10g00594 Bpe-Chr10:12858504 Bpe12g00588 Bpe-Chr12:11659486 0 dispersed
Bpe12g00588 Bpe-Chr12:11659486 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00588 K05391 - csv:101209760 1083.55