Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00589 TCAGGAAGAAACACTAAGTGGGTGGGAAGCATCAACAAGTTTAGTACATCGGCTGCTTTGGAGGAATTCATCACTCCACCAGTTCAAATTCGTTACACTCAACATCTCATCGATGGACGCTTTGTAGACTCCGTTTCAGGAAAAACATTCCCAACCTTAGACCCTCGTACTGGGGAAATAATTGCTCAAGTTGCTGAAGGTGATGCCGAAGACATCAACCAAGCAGTATCGGCTGCTCGTAGGGCTTTCGATGAGGGTCCATGGCCAAGAATGCCTGCTTATGAAAGATCAAAGATATTACTCAAGTTTGCTGATTTGATCGAGAAGCATAGAGATGAACTTGCAGTTCTGGAGACATGGGACAATGGAAAACCTTACGAACAAGCTTTAAAATCCGAATTACCTACATTAACACGATTATTTCGTTACTATGCAGGTTGGGCCGATAAAATCCATGGTCTAACTGTTCCGGCTGATGGAGATCATCATGTGGAAATATTGCATGAGCCAATTGGTGTAGTGGGGCAAATAATTCCTTGGAATTTTCCTCTCATTTTGTTTGCTTGGAAAGTTGGCCCTGCATTAGCATGTGGAAATACGATCGTTCTAAAACCTGCAGAGCAAACACCACTAACGGCTCTTTACGTTGCCAACCTCTTCCTCGAGGCTGGTCTTCCTCCAGGTGTGCTTAATATAGTTTCAGGATATGGTCCTTCTGCTGGTGCAGCTCTTGCCAGTCACATGGATGTAGATAAGCTATCTTTTACGGGATCCACCGAAACTGGAAAAATCGTATTGGAATTGGCTGCAAGAAGTAATCTTAAGCCAGTGACGTTGGAGCTAGGAGGAAAATCACCATTCATTGTGTGTGAAGATGCTGATATAGATAGGGCTGTTGAACTTGCTCATTTCGCTCTCTTTTTTAACCAGGGTCAATGTTGTTGTGCCGGGTCTCGCACTTACGTGCATGAGCGTGTCTACGATGAGTTTGTCGAAAAGTCGAAGGCTCGTGCTGTTAGACGTGCTGTTGGTGATCCTTTCAAAAAGGGCGTTGAACAAGGTCCTCAGATCGACTCTGAGCAATTTGAAAAAGTTCTCCGATATATAAAATTGGGTTTGGAAAGTAACGCTACTTTGGAATGCGGAGGCGAGAGACTCGGTTCAAAGGGGTTCTTTGTCCAGCCTACCGTCTTCTCCAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATATTTGGCCCGGTGCAGTCCATCTTGAAATTCAAGGAGCTCGACGAGGTGATACGAAGAGCGAATTCAACTCATTATGGCTTAGCAGCTGGGGTTTACACGAAGAACATCGATACGGCGAACACTCTGGCTCGAGCGTTGAGGACAGGGACAGTCTGGATTAACTGCTTTGATGTTTTTGATGCCGCCATTCCATTTGGAGGGTATAAAATGAGTGGGGTTGGAAGAGAGAAAGGGGTTTACAGCCTCCACAGCTACTTGCAGGTCAAGGCTGTTGTTACACATTTGAAGAATCCAGCATGGTTGTAA 1542 44.81 SGRNTKWVGSINKFSTSAALEEFITPPVQIRYTQHLIDGRFVDSVSGKTFPTLDPRTGEIIAQVAEGDAEDINQAVSAARRAFDEGPWPRMPAYERSKILLKFADLIEKHRDELAVLETWDNGKPYEQALKSELPTLTRLFRYYAGWADKIHGLTVPADGDHHVEILHEPIGVVGQIIPWNFPLILFAWKVGPALACGNTIVLKPAEQTPLTALYVANLFLEAGLPPGVLNIVSGYGPSAGAALASHMDVDKLSFTGSTETGKIVLELAARSNLKPVTLELGGKSPFIVCEDADIDRAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKSKARAVRRAVGDPFKKGVEQGPQIDSEQFEKVLRYIKLGLESNATLECGGERLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQSILKFKELDEVIRRANSTHYGLAAGVYTKNIDTANTLARALRTGTVWINCFDVFDAAIPFGGYKMSGVGREKGVYSLHSYLQVKAVVTHLKNPAWL 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11666187 11669023 + Bpe005852.1 Bpe12g00589 112602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00589 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 503 IPR016162 GO:0016491
Bpe12g00589 513 SUPERFAMILY ALDH-like 28 507 IPR016161 GO:0016491
Bpe12g00589 513 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 513 - -
Bpe12g00589 513 CDD ALDH_F2BC 30 505 - -
Bpe12g00589 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 474 IPR016163 GO:0016620
Bpe12g00589 513 Pfam Aldehyde dehydrogenase family 41 503 IPR015590 GO:0016491
Bpe12g00589 513 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 279 286 IPR029510 GO:0016491
Bpe12g00589 513 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 7 513 - -
Bpe12g00589 513 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 307 318 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00332 Bpe-Chr7:2577939 Bpe12g00589 Bpe-Chr12:11666187 2.14E-116 dispersed
Bpe07g00475 Bpe-Chr7:8120640 Bpe12g00589 Bpe-Chr12:11666187 5.46E-117 dispersed
Bpe11g01767 Bpe-Chr11:14058782 Bpe12g00589 Bpe-Chr12:11666187 0 dispersed
Bpe12g00577 Bpe-Chr12:11564836 Bpe12g00589 Bpe-Chr12:11666187 1.47E-117 dispersed
Bpe12g00589 Bpe-Chr12:11666187 Bpe13g01458 Bpe-Chr13:19861523 0 dispersed
Bpe13g00046 Bpe-Chr13:1350644 Bpe12g00589 Bpe-Chr12:11666187 1.14E-39 transposed
Bpe12g00589 Bpe-Chr12:11666187 Bpe13g00492 Bpe-Chr13:12333457 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00589 K00128 - tcc:18603880 905.205