Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00622 ATGAGAGTTCGAAGATACGAGCTCGGGAGGGCGGAGGAGGCGACCCACCCCGACTCCATGAGAGCCACCTTAGCAGAGTTTCTTTCCACTCTCATTTTCGTCTTCGCCGGCGAAGGCTCCGTCCTTGCTCTCTGTAAGCATTTTCCTCTCACTCTGTGTATTTTCAGTTCTTTCAGATCCTCCGTTCGATGGTTACGAGGACGATTATTTGGGTTTGGTTTGGCAGCTAAGATTTACCCGGGCAGAGAGATAACAGCGGCGGAGATGGTGGTTGTGGCCGTAGCACATGGTTTTGCGCTGTTTTCAGCCATGTCGGCAGCCATTAACATCTCCGGTGGGCATGTGAATCCGGCCGTGACGATGGGAGCTCTTCTGGGAGGGAGAATATCGTTGCTTCGAGCTGTCTTCTATTGGGTGGCTCAGCTCTTGGCTGCGGTGGTTGCTGCCCTCTTGCTCCGACTCGTTACTGCCGGAAAGAGGCCAGAAGGATTTTACGTTACATCTGGACTAGGGGTTTGGCATGGACTTATATTTGAAATAGTGATGACATTCGGGTTGGTCTACGTGTTCTATGCTACTTCGGTCGACCCGAAGAGAGGAGGGTTAGGCACGATAGCTCCGTTGGCTGTCGGGTTGATCCTCAGTGCCAACATGTTGGTGGGCGGTCCATTTGACGGTGCATGCATGAACCCAGCTCGAGCTTTCGGACCGGCTTTGGTAGGGTGGCGATGGAGAGATCATTGGATTTACTGGGTCGGTCCACTTTTGGGTGGTGGCTTGGCCGGCCTCATTTATGAGTACACGGTCATCCCCGGCGAGCAGCCCCCGCACCCACATATCCACCAGCCCTTGGCTCCAGAAGATTAC 867 54.09 MRVRRYELGRAEEATHPDSMRATLAEFLSTLIFVFAGEGSVLALCKHFPLTLCIFSSFRSSVRWLRGRLFGFGLAAKIYPGREITAAEMVVVAVAHGFALFSAMSAAINISGGHVNPAVTMGALLGGRISLLRAVFYWVAQLLAAVVAALLLRLVTAGKRPEGFYVTSGLGVWHGLIFEIVMTFGLVYVFYATSVDPKRGGLGTIAPLAVGLILSANMLVGGPFDGACMNPARAFGPALVGWRWRDHWIYWVGPLLGGGLAGLIYEYTVIPGEQPPHPHIHQPLAPEDY 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11888495 11889443 + Bpe024902 Bpe12g00622 112635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00622 289 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Bpe12g00622 289 SUPERFAMILY Aquaporin-like 13 278 IPR023271 -
Bpe12g00622 289 PANTHER AQUAPORIN-8 3 51 IPR034294 -
Bpe12g00622 289 TIGRFAM MIP: MIP family channel proteins 25 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 Gene3D Glycerol uptake facilitator protein. 5 274 IPR023271 -
Bpe12g00622 289 PANTHER - 76 289 - -
Bpe12g00622 289 PANTHER AQUAPORIN-8 76 289 IPR034294 -
Bpe12g00622 289 Pfam Major intrinsic protein 14 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PRINTS Major intrinsic protein family signature 178 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe12g00622 289 PANTHER - 3 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00622 Bpe-Chr12:11888495 Bpe14g00514 Bpe-Chr14:4529349 8.86E-66 dispersed
Bpe12g00622 Bpe-Chr12:11888495 Bpe03g01275 Bpe-Chr3:31280109 2.82E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00622 K09873 - fve:101307398 369.392