Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe12g00636 | ATGGTGAGGAAGAAGAGAGGTGAGCGTGGGAGCTCGGAGGCTCAGGAATCAAGTGGTGGTGGAAGCCAAGGTGGTCCTCTGCGGCAAGGCGAAAGGGGTCCCCAGCAGCAACAAGGAGGAAGAGGTTGGGGTCCTCAAGGTGGTCGAGGAGTCCCCCATCGTGATGCTGGTGTTGGAGGCCGAGGACGTGGAATGCCTCAACAGCAACAGCAACAACAGCATCAATATCAACCAAGAGGCAGGGGAGGACCACCTCCGCAGGGTGGTGGTCCTGGTGTCCATGGTGGAGGATTGCCTCCTTCAGGTGGGCCGTCCAGACCACCTGTTTCCGAGCTGCACCAAGCTTCCTTGGCTCCATATCAAGTTGGGGTGACTCAGCCCACACCAGGTGGGGGTAGTTCTTCAGCTCATCTTCCTGAAGCATCACAGATGGAGCAACAGTTTGAGCAGTTATCCGTTCAGCAGGAAACTGCTTCTACTCAATCAATTCATCCAATGCCACCCTCCAGCAAATCAATGAGATTCCCACTTCGCCCTGGAAAGGGAAGCACGGGTAGAAGGTGCATTGTGAAGGCTAATCACTTTTTTGCCGAACTACCTAACAAAGATCTTCACCAGTATGATGTTACAATTACCCCAGAGCTGACTTCACGAGGTGTTAGTCGTGCTGTAATGAATCAGTTGGTGAAATCTTACAGGGAGTCTCACCTTGGTAAGAGGCTTCCTGCCTATGATGGTCGGAAAAGTCTGTATACTGCAGGCCCTCTTCCATTTCTATCAAAGGAATTCAAAATCAGTCTCTTGGATGAAGATGATGGATCAGGCTCTCAAAGGAGGGAGAGGGAATTTAAGGTTGTGATCAAATTTGCTGCACGAGCTGACCTACATCATTTAGGGCTCTTTTTGGAAGGCAGACAGGCAGATGCTCCTCAGGAAGCCCTCCAGGTGCTGGACATTGTCCTTCGTGAACTGCCTACCACTAGATATTGTCCTATTGCACGATCATTTTATGCGCCTGGTCTGGGAAGGCGTCAGCCGCTTGGTGAGGGATTGGAAAGTTGGCGTGGCTTTTATCAAAGTATTCGACCAACACAAATGGGACTGTCTCTGAATATTGATATGTCTTCTACTGCTTTTATTGAGCCATTGCCAGTCATTGACTTTGTTAAAAAACTTCTGAATCGAGATGTGTCATCTCGGACACTGACCGATGCTGATCGTGTGAAGATAAAGAAAGCTTTACGAGGAGTCAAGGTTGAAGTCACACACCGAGGTAACATGCGAAGAAAGTATCGTATTTCTGGTCTAACATCGCAGGCGACAAGAGAACTTACTTTCCCTGTTGATGAGATGGGTACAATTAAATCTGTTGTTGAGTATTTTTCCGAAACCTATGGTTTCGTTATTCAACATACTCAATGGCCTTGTCTACAAGTTGGAAACCAGCAGAGACCTAATTATTTACCAATGGAGGTATGCAAGATTGTTGAGGGCCAGAGGTACTCAAAGAAACTGAACAATAAACAGATATCAGCATTGTTGAAAGTCACCTGCCAGCGTCCTCACGAAAGGGAACAAGATATAATGCAGACTGTTAGGCATAACGCGTATCATAATGATCCGTATGCAAAGGAGTTTGGGATTAAGATCAGTGAACAGCTTGCTTCTGTTGAAGCCCGTATCCTCCCTGCGCCTTGGCTCAAATACCATGATACTGGAAGGGAAAAAGATTGTTTGCCACAAGTGGGGCAATGGAACATGAGGAATAAGAAAATGGTTAATGGTGGTACAGTTAACAACTGGATGTGCATTAATTTTTCTCCTCTTGTACAAGACAGTGTTGCCCAAGGATTCTGCAGTGAACTCGCTCAAATGTGTAATATATCTGGAATGGCTTACAATCCAGAACCAGTACTTCCTCTCCGTAGTGCTCGTCCTGATCAAGTGGAGAAGGTTCTTAAAACCCAGTATCATGATGCAATGACAAAACTTAAGCCAAAATGCAAAGAACTTGATTTGCTTATTGTTGTTCTTCCAGATGATAATGGGTCCCTATATGGTGATTTGAAGCGAATTTGTGAGACCGATCTTGGTCTTGTCTCACAATGCTGTTTGACAAAGCACGTGTTCAAAATGAGTAAACAATATTTAGCTAATGTGGCCCTGAAGATTAATGTGAAAGTTGGGGGAAGGAATACCGTACTTGTTGATGCTGTTTTAAGGCAGATTCCTTTGGTTAGCGATATTCCTACAATCATTTTTGGTGCTGATGTTACTCATCCTCCTCCAGGGGAGGATTCTAGCCCATCCATTGCTGCTGTTGTGGCTTCCCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTTTGGTTTCTGCCCAGGCACACAGACAAGAGCTCATTCAAGATCTGTTTAAACAATGGCAAGATCCAGTAAGAGGAACAGTAGCTGGAGGAATGATCAAGGAACTCCTCATTTCATTCCGAAGAGCTACTGGACAGAAACCTCAACGAATAATCTTTTACAGGGATGGAGTGAGCGAGGGACAGTTCTATCAGGTTTTGCTGCATGAACTTGACGCCATTAGGAAGGCATGTAATTCTTTGGAACCCAATTATCAGCCTCGAGTAACATTTGTTGTAGTTCAGAAGCGGCACCACACTCGATTATTTGCTAACAATCATCGTGACTACAATACAGTTGATGGGAGTGGCAACATATTACCTGGTACGGTCGTGGACTCGAAGATTTGTCATCCTACAGAATTTGACTTCTACCTATGCAGCCACGCAGGAATACAGGGTACTAGCCGCCCAGCTCACTACCATGTTCTATGGGATGAGAACGAGTTCACAGCTGATGGGTTGCAATCCCTGACCAATAATCTTTGCTACACTTATGCTAGGTGTACACGATCTGTATCCATTGTTCCCCCTGCATACTATGCCCATCTTGCTGCATTTAGAGCTCGATTCTACATGGAGCCAGATACATCAGATAGTGGGTCAATGACGAGTGGAGCAGCCGGACGGGGTGGCGCTCGTAGCTCTCGCCCATTGGGGGCAGCTGCAGTGAGACCATTGCCTGCGCTGAAGGAAAATGTTAAACGAGTTATGTTTTACTGCTAA | 3126 | 46.23 | MVRKKRGERGSSEAQESSGGGSQGGPLRQGERGPQQQQGGRGWGPQGGRGVPHRDAGVGGRGRGMPQQQQQQQHQYQPRGRGGPPPQGGGPGVHGGGLPPSGGPSRPPVSELHQASLAPYQVGVTQPTPGGGSSSAHLPEASQMEQQFEQLSVQQETASTQSIHPMPPSSKSMRFPLRPGKGSTGRRCIVKANHFFAELPNKDLHQYDVTITPELTSRGVSRAVMNQLVKSYRESHLGKRLPAYDGRKSLYTAGPLPFLSKEFKISLLDEDDGSGSQRREREFKVVIKFAARADLHHLGLFLEGRQADAPQEALQVLDIVLRELPTTRYCPIARSFYAPGLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVKKLLNRDVSSRTLTDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDEMGTIKSVVEYFSETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKKLNNKQISALLKVTCQRPHEREQDIMQTVRHNAYHNDPYAKEFGIKISEQLASVEARILPAPWLKYHDTGREKDCLPQVGQWNMRNKKMVNGGTVNNWMCINFSPLVQDSVAQGFCSELAQMCNISGMAYNPEPVLPLRSARPDQVEKVLKTQYHDAMTKLKPKCKELDLLIVVLPDDNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAVLRQIPLVSDIPTIIFGADVTHPPPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKQWQDPVRGTVAGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACNSLEPNYQPRVTFVVVQKRHHTRLFANNHRDYNTVDGSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENEFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMTSGAAGRGGARSSRPLGAAAVRPLPALKENVKRVMFYC | 1041 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 11980127 | 11987358 | - | Bpe005896.1 | Bpe12g00636 | 112649 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe12g00636 | 1041 | CDD | Piwi_ago-like | 541 | 993 | IPR045246 | - | |
| Bpe12g00636 | 1041 | Pfam | PAZ domain | 386 | 512 | IPR003100 | GO:0005515 | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 13 | 42 | - | - | |
| Bpe12g00636 | 1041 | Pfam | Mid domain of argonaute | 580 | 655 | IPR032473 | - | |
| Bpe12g00636 | 1041 | CDD | PAZ_argonaute_like | 382 | 496 | - | - | |
| Bpe12g00636 | 1041 | Gene3D | paz domain | 376 | 501 | - | - | |
| Bpe12g00636 | 1041 | SUPERFAMILY | Ribonuclease H-like | 669 | 995 | IPR012337 | - | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 996 | 1018 | - | - | |
| Bpe12g00636 | 1041 | SMART | Piwi_a_2 | 673 | 994 | IPR003165 | GO:0003676 | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
| Bpe12g00636 | 1041 | ProSiteProfiles | Piwi domain profile. | 673 | 994 | IPR003165 | GO:0003676 | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 160 | 182 | - | - | |
| Bpe12g00636 | 1041 | SMART | PAZ_2_a_3 | 387 | 519 | IPR003100 | GO:0005515 | |
| Bpe12g00636 | 1041 | Pfam | Argonaute linker 1 domain | 332 | 381 | IPR014811 | - | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 119 | 148 | - | - | |
| Bpe12g00636 | 1041 | Gene3D | - | 742 | 1041 | IPR036397 | GO:0003676 | |
| Bpe12g00636 | 1041 | SUPERFAMILY | PAZ domain | 377 | 537 | IPR036085 | GO:0005515 | |
| Bpe12g00636 | 1041 | Pfam | Piwi domain | 674 | 993 | IPR003165 | GO:0003676 | |
| Bpe12g00636 | 1041 | ProSiteProfiles | PAZ domain profile. | 383 | 497 | IPR003100 | GO:0005515 | |
| Bpe12g00636 | 1041 | MobiDBLite | consensus disorder prediction | 1 | 148 | - | - | |
| Bpe12g00636 | 1041 | PANTHER | PROTEIN ARGONAUTE 1A | 73 | 1040 | - | - | |
| Bpe12g00636 | 1041 | Pfam | Argonaute linker 2 domain | 523 | 569 | IPR032472 | - | |
| Bpe12g00636 | 1041 | SMART | DUF1785_2 | 330 | 382 | IPR014811 | - | |
| Bpe12g00636 | 1041 | Gene3D | - | 561 | 736 | - | - | |
| Bpe12g00636 | 1041 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 73 | 1040 | - | - | |
| Bpe12g00636 | 1041 | Pfam | Glycine-rich region of argonaut | 72 | 168 | IPR024357 | - | |
| Bpe12g00636 | 1041 | Pfam | N-terminal domain of argonaute | 186 | 321 | IPR032474 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe08g00312 | Bpe-Chr8:1869303 | Bpe12g00636 | Bpe-Chr12:11980127 | 9.01E-150 | dispersed | |
| Bpe11g01061 | Bpe-Chr11:7950938 | Bpe12g00636 | Bpe-Chr12:11980127 | 2.04E-36 | dispersed | |
| Bpe12g00636 | Bpe-Chr12:11980127 | Bpe14g01214 | Bpe-Chr14:9068277 | 0 | dispersed | |
| Bpe11g00840 | Bpe-Chr11:6239325 | Bpe12g00636 | Bpe-Chr12:11980127 | 0 | transposed | |
| Bpe10g00887 | Bpe-Chr10:14621656 | Bpe12g00636 | Bpe-Chr12:11980127 | 0 | transposed | |
| Bpe12g00636 | Bpe-Chr12:11980127 | Bpe07g01069 | Bpe-Chr7:16095725 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe12g00636 | K11593 | - | rcu:8275074 | 1648.64 |