Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00636 ATGGTGAGGAAGAAGAGAGGTGAGCGTGGGAGCTCGGAGGCTCAGGAATCAAGTGGTGGTGGAAGCCAAGGTGGTCCTCTGCGGCAAGGCGAAAGGGGTCCCCAGCAGCAACAAGGAGGAAGAGGTTGGGGTCCTCAAGGTGGTCGAGGAGTCCCCCATCGTGATGCTGGTGTTGGAGGCCGAGGACGTGGAATGCCTCAACAGCAACAGCAACAACAGCATCAATATCAACCAAGAGGCAGGGGAGGACCACCTCCGCAGGGTGGTGGTCCTGGTGTCCATGGTGGAGGATTGCCTCCTTCAGGTGGGCCGTCCAGACCACCTGTTTCCGAGCTGCACCAAGCTTCCTTGGCTCCATATCAAGTTGGGGTGACTCAGCCCACACCAGGTGGGGGTAGTTCTTCAGCTCATCTTCCTGAAGCATCACAGATGGAGCAACAGTTTGAGCAGTTATCCGTTCAGCAGGAAACTGCTTCTACTCAATCAATTCATCCAATGCCACCCTCCAGCAAATCAATGAGATTCCCACTTCGCCCTGGAAAGGGAAGCACGGGTAGAAGGTGCATTGTGAAGGCTAATCACTTTTTTGCCGAACTACCTAACAAAGATCTTCACCAGTATGATGTTACAATTACCCCAGAGCTGACTTCACGAGGTGTTAGTCGTGCTGTAATGAATCAGTTGGTGAAATCTTACAGGGAGTCTCACCTTGGTAAGAGGCTTCCTGCCTATGATGGTCGGAAAAGTCTGTATACTGCAGGCCCTCTTCCATTTCTATCAAAGGAATTCAAAATCAGTCTCTTGGATGAAGATGATGGATCAGGCTCTCAAAGGAGGGAGAGGGAATTTAAGGTTGTGATCAAATTTGCTGCACGAGCTGACCTACATCATTTAGGGCTCTTTTTGGAAGGCAGACAGGCAGATGCTCCTCAGGAAGCCCTCCAGGTGCTGGACATTGTCCTTCGTGAACTGCCTACCACTAGATATTGTCCTATTGCACGATCATTTTATGCGCCTGGTCTGGGAAGGCGTCAGCCGCTTGGTGAGGGATTGGAAAGTTGGCGTGGCTTTTATCAAAGTATTCGACCAACACAAATGGGACTGTCTCTGAATATTGATATGTCTTCTACTGCTTTTATTGAGCCATTGCCAGTCATTGACTTTGTTAAAAAACTTCTGAATCGAGATGTGTCATCTCGGACACTGACCGATGCTGATCGTGTGAAGATAAAGAAAGCTTTACGAGGAGTCAAGGTTGAAGTCACACACCGAGGTAACATGCGAAGAAAGTATCGTATTTCTGGTCTAACATCGCAGGCGACAAGAGAACTTACTTTCCCTGTTGATGAGATGGGTACAATTAAATCTGTTGTTGAGTATTTTTCCGAAACCTATGGTTTCGTTATTCAACATACTCAATGGCCTTGTCTACAAGTTGGAAACCAGCAGAGACCTAATTATTTACCAATGGAGGTATGCAAGATTGTTGAGGGCCAGAGGTACTCAAAGAAACTGAACAATAAACAGATATCAGCATTGTTGAAAGTCACCTGCCAGCGTCCTCACGAAAGGGAACAAGATATAATGCAGACTGTTAGGCATAACGCGTATCATAATGATCCGTATGCAAAGGAGTTTGGGATTAAGATCAGTGAACAGCTTGCTTCTGTTGAAGCCCGTATCCTCCCTGCGCCTTGGCTCAAATACCATGATACTGGAAGGGAAAAAGATTGTTTGCCACAAGTGGGGCAATGGAACATGAGGAATAAGAAAATGGTTAATGGTGGTACAGTTAACAACTGGATGTGCATTAATTTTTCTCCTCTTGTACAAGACAGTGTTGCCCAAGGATTCTGCAGTGAACTCGCTCAAATGTGTAATATATCTGGAATGGCTTACAATCCAGAACCAGTACTTCCTCTCCGTAGTGCTCGTCCTGATCAAGTGGAGAAGGTTCTTAAAACCCAGTATCATGATGCAATGACAAAACTTAAGCCAAAATGCAAAGAACTTGATTTGCTTATTGTTGTTCTTCCAGATGATAATGGGTCCCTATATGGTGATTTGAAGCGAATTTGTGAGACCGATCTTGGTCTTGTCTCACAATGCTGTTTGACAAAGCACGTGTTCAAAATGAGTAAACAATATTTAGCTAATGTGGCCCTGAAGATTAATGTGAAAGTTGGGGGAAGGAATACCGTACTTGTTGATGCTGTTTTAAGGCAGATTCCTTTGGTTAGCGATATTCCTACAATCATTTTTGGTGCTGATGTTACTCATCCTCCTCCAGGGGAGGATTCTAGCCCATCCATTGCTGCTGTTGTGGCTTCCCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTTTGGTTTCTGCCCAGGCACACAGACAAGAGCTCATTCAAGATCTGTTTAAACAATGGCAAGATCCAGTAAGAGGAACAGTAGCTGGAGGAATGATCAAGGAACTCCTCATTTCATTCCGAAGAGCTACTGGACAGAAACCTCAACGAATAATCTTTTACAGGGATGGAGTGAGCGAGGGACAGTTCTATCAGGTTTTGCTGCATGAACTTGACGCCATTAGGAAGGCATGTAATTCTTTGGAACCCAATTATCAGCCTCGAGTAACATTTGTTGTAGTTCAGAAGCGGCACCACACTCGATTATTTGCTAACAATCATCGTGACTACAATACAGTTGATGGGAGTGGCAACATATTACCTGGTACGGTCGTGGACTCGAAGATTTGTCATCCTACAGAATTTGACTTCTACCTATGCAGCCACGCAGGAATACAGGGTACTAGCCGCCCAGCTCACTACCATGTTCTATGGGATGAGAACGAGTTCACAGCTGATGGGTTGCAATCCCTGACCAATAATCTTTGCTACACTTATGCTAGGTGTACACGATCTGTATCCATTGTTCCCCCTGCATACTATGCCCATCTTGCTGCATTTAGAGCTCGATTCTACATGGAGCCAGATACATCAGATAGTGGGTCAATGACGAGTGGAGCAGCCGGACGGGGTGGCGCTCGTAGCTCTCGCCCATTGGGGGCAGCTGCAGTGAGACCATTGCCTGCGCTGAAGGAAAATGTTAAACGAGTTATGTTTTACTGCTAA 3126 46.23 MVRKKRGERGSSEAQESSGGGSQGGPLRQGERGPQQQQGGRGWGPQGGRGVPHRDAGVGGRGRGMPQQQQQQQHQYQPRGRGGPPPQGGGPGVHGGGLPPSGGPSRPPVSELHQASLAPYQVGVTQPTPGGGSSSAHLPEASQMEQQFEQLSVQQETASTQSIHPMPPSSKSMRFPLRPGKGSTGRRCIVKANHFFAELPNKDLHQYDVTITPELTSRGVSRAVMNQLVKSYRESHLGKRLPAYDGRKSLYTAGPLPFLSKEFKISLLDEDDGSGSQRREREFKVVIKFAARADLHHLGLFLEGRQADAPQEALQVLDIVLRELPTTRYCPIARSFYAPGLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVKKLLNRDVSSRTLTDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDEMGTIKSVVEYFSETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKKLNNKQISALLKVTCQRPHEREQDIMQTVRHNAYHNDPYAKEFGIKISEQLASVEARILPAPWLKYHDTGREKDCLPQVGQWNMRNKKMVNGGTVNNWMCINFSPLVQDSVAQGFCSELAQMCNISGMAYNPEPVLPLRSARPDQVEKVLKTQYHDAMTKLKPKCKELDLLIVVLPDDNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAVLRQIPLVSDIPTIIFGADVTHPPPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKQWQDPVRGTVAGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACNSLEPNYQPRVTFVVVQKRHHTRLFANNHRDYNTVDGSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENEFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMTSGAAGRGGARSSRPLGAAAVRPLPALKENVKRVMFYC 1041
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 11980127 11987358 - Bpe005896.1 Bpe12g00636 112649
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00636 1041 CDD Piwi_ago-like 541 993 IPR045246 -
Bpe12g00636 1041 Pfam PAZ domain 386 512 IPR003100 GO:0005515
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 13 42 - -
Bpe12g00636 1041 Pfam Mid domain of argonaute 580 655 IPR032473 -
Bpe12g00636 1041 CDD PAZ_argonaute_like 382 496 - -
Bpe12g00636 1041 Gene3D paz domain 376 501 - -
Bpe12g00636 1041 SUPERFAMILY Ribonuclease H-like 669 995 IPR012337 -
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 996 1018 - -
Bpe12g00636 1041 SMART Piwi_a_2 673 994 IPR003165 GO:0003676
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 64 78 - -
Bpe12g00636 1041 ProSiteProfiles Piwi domain profile. 673 994 IPR003165 GO:0003676
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 160 182 - -
Bpe12g00636 1041 SMART PAZ_2_a_3 387 519 IPR003100 GO:0005515
Bpe12g00636 1041 Pfam Argonaute linker 1 domain 332 381 IPR014811 -
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 119 148 - -
Bpe12g00636 1041 Gene3D - 742 1041 IPR036397 GO:0003676
Bpe12g00636 1041 SUPERFAMILY PAZ domain 377 537 IPR036085 GO:0005515
Bpe12g00636 1041 Pfam Piwi domain 674 993 IPR003165 GO:0003676
Bpe12g00636 1041 ProSiteProfiles PAZ domain profile. 383 497 IPR003100 GO:0005515
Bpe12g00636 1041 MobiDBLite consensus disorder prediction 1 148 - -
Bpe12g00636 1041 PANTHER PROTEIN ARGONAUTE 1A 73 1040 - -
Bpe12g00636 1041 Pfam Argonaute linker 2 domain 523 569 IPR032472 -
Bpe12g00636 1041 SMART DUF1785_2 330 382 IPR014811 -
Bpe12g00636 1041 Gene3D - 561 736 - -
Bpe12g00636 1041 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 73 1040 - -
Bpe12g00636 1041 Pfam Glycine-rich region of argonaut 72 168 IPR024357 -
Bpe12g00636 1041 Pfam N-terminal domain of argonaute 186 321 IPR032474 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00312 Bpe-Chr8:1869303 Bpe12g00636 Bpe-Chr12:11980127 9.01E-150 dispersed
Bpe11g01061 Bpe-Chr11:7950938 Bpe12g00636 Bpe-Chr12:11980127 2.04E-36 dispersed
Bpe12g00636 Bpe-Chr12:11980127 Bpe14g01214 Bpe-Chr14:9068277 0 dispersed
Bpe11g00840 Bpe-Chr11:6239325 Bpe12g00636 Bpe-Chr12:11980127 0 transposed
Bpe10g00887 Bpe-Chr10:14621656 Bpe12g00636 Bpe-Chr12:11980127 0 transposed
Bpe12g00636 Bpe-Chr12:11980127 Bpe07g01069 Bpe-Chr7:16095725 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00636 K11593 - rcu:8275074 1648.64