Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00646 ATGGTTTTCAAAGGCAGGTTCTTTTCCTCTTCTAGGAAGTCTGATTCGTCTAGTCCAGATGGATCCAATAGTCCTCGATTCCTGGGTTCGAACTCGCCAATCGGATCCGACAAAAAGAAATCGAAATCTGGGACGAAAGAGGATGCTTCTATCTCTGACCACGGTGCTTCTGGAATCGGCAATTTTGGGGGAGTTGGTTCGAAAGATGGAACGAAGAAGAAGAATGCAAAGCTCAAGGAGAGTCAACTTCATACTCCCCCGGAAACGACGTTGAAGTCCTCTTCGCTGGTGAGTTCTAGTTCAGCGTACCCAGTGAAGAAGGCGGCGGATGTTAAGGACGTGCCTTCATCAGTGTCGCCTATACTCGCTTCCTCTCTTGGATTGAATAGAATCAAGACGAGATCAGGGCCTTTGCCCCAAGAAAGCTTTTTCGGGTTTAAAAATGATAAGGGACAAGCTCTGGGATCGAGTAATCTTTCGAAGCCTGGTAGCAGTGGGAGCTCCAGTTCTAGCTCTTTGAAAAGTGGGGGAAAGAAGAAAGAAGTGCTAAATCAAAGCAGGATGAGTTCTCAGGAGAATGTTAAACCTTGGATGTATGGTGTAAACAGTTCGGAGAATGTTTCTCCTGGGAGTTCTAAATCTAGAGAATTAAGTCCAAATCTACCGGCACACCCACGGCGTCAGAGCCGGGAATCATCATCCGAAGCAGGTATGAAAAGTGAATCATGCGGATATTCTGGAGGCTTAAGAAGTTCTGAAGTTTGTACGCCTGAGACTACATATGATTGTGAAAATCCAAAGGAGTCCGAATCTCCTCGTTTTCAAGCCATACTCCGTGTTACTAGTGCTCCTAGAAGGAAGTATCCTGCAGATATAAAAAGTTTCTCCCATGAACTAAACTCCAAAGGAGTAAGACCTTTCCCATTTTGGAAGCCCAGAGGATTGAATAACTTAGAGGAAATATTAGTTGTCATACGAGCAAAATTTGACAGAGCAAAGGAAGAAGTGAACTCTGATCTGGCTGTTTTTGCAGCAGATCTGGTTGGTACTCTTGAAAAAGATGCAGATAGTCATCCTGAGTGGCAAGAAACAATTGAGGACTTGCTTGTTTTAGCTCGAAGCTGTGCCATGACCTCAGCTGCTGAGTTTTGGCTCCAATGTGAAGGCATTGTTCAGGAATTGGACGATAGGCGTCAAGAACTCCCTGGAGGTAAGCTGAAGCAGCTTCATACTCGAATGCTTTTCATACTCACAAGATGCACAAGGTTGTTACAGTTTCACAAGGAGAGTGGGTTGGCTGAGGATGAAAATGTCTTCCAGCTTCACCCATCTAGAATACTCAATTCCGCGGATAAAAGAGGTCCTTCAGGAATGACAATGGATTTAAAAAGTAGTACTGCTGTTAAGAGCACAAAAGTACTTTCAGTTAGGAAATCTTACAGCCAGGAGCAACATTGGAGTCAAGCACATGATAATCAGAAGGGAAATTTTGCGTCACCCTCTGTGGATAATAGTTCAAAGAAGTTGGTATCTCCTTCTAGCAGGGACAGGATGGCTTCTTGGAAAAAACTTCCTTCTCCGGCAGTAAAAGTTGTTAAAGAAGCAGCGCCTACAAAAGATGAGAATGATATCAGGGCAAAACCGACAAAGATGACAAACAATAATAGTGTAGTGTCTGAAGTTGACATGTCTGGTTTTAAGGGGACGGAGGGCTTCCCTGCCAAAGATTTCCACGAACAGACTGTTAAGCACCAACACAAGGCTTCTTGGGGTTACTGGGGGGACCAGCCAACTGTTTTTAACGAAAGTTCAATAATTTGTCGTATTTGTGAGGAGGAGGTTCCTACATCACATGTGGAAGATCATTTAAGAATTTGTGCAATTGTTGATCGATGTGATCAGAAGGGTCTAAGTGTGAATGACCGTCTTATAAGAATTGCTGAAACCCTAGAAAAGATGATGGAGTCCTTTACACAAAAGGATAGCCACCATGTAGAAAGTCCAGATGTTGCAAAAGTGACGAATTCGAGTGTTACTGAAGAATCTGATGCTCTTTCTCCAAAACTTAGTGATTGGTCCCGTCGAGGCTCAGAGGATATGCTTGACTGTTTCCATGAAACAGATAATTCTGTCTTTATGGATGACTTAAAGGGTTTGCCTTCAATGACATGTAAAACTCGATTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCAGCAGGTAGTATGACTCCTCGGTCTCCAATATTGACTCCAAGAACCAGTCAGATGGATTTGTTCTTGGCCGGAAAGTGTGCTTACTCTGAGCAGGATGATCACCCGCAGATGAACGAACTTGCTGATATTGCAAGATGTGTTGCGAATCCTTCTTTGGATGATGAGAACTCCATGCAATATTTACTATCTTGTCTTGAAGACTTGAGGGTTGTCATTGACCGGAGGAAGTTTGATGCACTAACTGTTGAGACCTTTGGCACACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAACTTTGTGAGCTGGTTGATGATGAGAAAGTTGATATAACTAGTACTGTTATTGATGAAGATACACCTTTGGAAGATGATGTGGTTCGTAGCTTAAGAACAAGCCCCGTGCATTCTTCCAAGGACCGAACTTCAATTGATGACTTTGAGATTATAAAACCAATCAGCAGAGGGGCATTTGGTAGGGTGTTTCTTGCCAAAAAGAGAACAACTGGGGATCTCTTTGCAATAAAGGTTTTGAAGAAGGCCGATATGATTCGTAAGAATGCTGTTGAAAGCATATTAGCAGAACGTGATATTTTAATTTCTGTCCGCAACCCATTTGTGGTGCGCTTCTTCTACTCTTTTACATGCCGTGAGAACTTGTATCTCGTCATGGAATACTTGAATGGGGGAGATCTCTACTCATTGTTGAGAAATTTAGGTTGCTTGGATGAAGATGTGGCACGTGTATATATAGCTGAAGTTGTACTCGCTTTGGAATATTTGCATTCTCTTCGTGTAGTTCATCGAGATTTGAAGCCCGATAATTTGCTAATTGCACATGATGGTCATATTAAGACACTCCATGTCCATTTTCAGTTGACAGATTTTGGGCTTTCAAAGGTTGGTCTTATCAATAGCACCGATGACTTGTCAGGACCTGCAGTTAGTGAGACATCTCTCCATGTAGAGGACGAACCTTCAGTATCTATGTCTGAAGATCAGAAAGAGAGGAGGAAGAAACGGTCCGCTGTGGGAACACCAGACTATTTGGCCCCGGAAATATTATTGGGAACTGGACATGGTACCACTGCGGACTGGTGGTCTGTGGGTACAATATTTGATAATATTCTCAATTGTCAAATACCTTGGCCTCGGGTACCTGATGAAATGAGCCATGAAGCACACGATTTAATTGATCGATTATTGACAGAGGATCCTCATCTGAGACTTGGAGCTAGAGGAGCTTCTGAGGTGAAGCAACATATGTTCTTTAAGGATATCAACTGGGATACGTTAGCAAGGCAAAAGGCTGCATTTGTTCCATCGTCAGAAAGTGCTCTAGATACTAGTTACTTCACAAGTCGATACTCGTGGAGTCACTCAAATGATAATGTCTATCCTTCAAGTGAACTTGAGGATTCCAGTGACGCTGATAGCTTAAGTGGCAGTAGTGGTTTTAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGTGGTCTCACTGAATTTGAGCCTGGCTCCTCTGTCAATTACTCTTTCAGTAATTTCTCATTTAAGAACCTCTCTCAGCTTGCATCGATCAACTACGACTTGCTCTCTAAAGGTTGGAAGGATGATCCACCCAATCCTAATGCATAA 3858 43.03 MVFKGRFFSSSRKSDSSSPDGSNSPRFLGSNSPIGSDKKKSKSGTKEDASISDHGASGIGNFGGVGSKDGTKKKNAKLKESQLHTPPETTLKSSSLVSSSSAYPVKKAADVKDVPSSVSPILASSLGLNRIKTRSGPLPQESFFGFKNDKGQALGSSNLSKPGSSGSSSSSSLKSGGKKKEVLNQSRMSSQENVKPWMYGVNSSENVSPGSSKSRELSPNLPAHPRRQSRESSSEAGMKSESCGYSGGLRSSEVCTPETTYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPFWKPRGLNNLEEILVVIRAKFDRAKEEVNSDLAVFAADLVGTLEKDADSHPEWQETIEDLLVLARSCAMTSAAEFWLQCEGIVQELDDRRQELPGGKLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLHPSRILNSADKRGPSGMTMDLKSSTAVKSTKVLSVRKSYSQEQHWSQAHDNQKGNFASPSVDNSSKKLVSPSSRDRMASWKKLPSPAVKVVKEAAPTKDENDIRAKPTKMTNNNSVVSEVDMSGFKGTEGFPAKDFHEQTVKHQHKASWGYWGDQPTVFNESSIICRICEEEVPTSHVEDHLRICAIVDRCDQKGLSVNDRLIRIAETLEKMMESFTQKDSHHVESPDVAKVTNSSVTEESDALSPKLSDWSRRGSEDMLDCFHETDNSVFMDDLKGLPSMTCKTRFGPKSDQGMTTSSAGSMTPRSPILTPRTSQMDLFLAGKCAYSEQDDHPQMNELADIARCVANPSLDDENSMQYLLSCLEDLRVVIDRRKFDALTVETFGTRIEKLIREKYLQLCELVDDEKVDITSTVIDEDTPLEDDVVRSLRTSPVHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKTLHVHFQLTDFGLSKVGLINSTDDLSGPAVSETSLHVEDEPSVSMSEDQKERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGTIFDNILNCQIPWPRVPDEMSHEAHDLIDRLLTEDPHLRLGARGASEVKQHMFFKDINWDTLARQKAAFVPSSESALDTSYFTSRYSWSHSNDNVYPSSELEDSSDADSLSGSSGFSNRQDEVGDECGGLTEFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPNPNA 1285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12105926 12117805 + Bpe005906.1 Bpe12g00646 112659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 669 686 - -
Bpe12g00646 1285 ProSiteProfiles AGC-kinase C-terminal domain profile. 1165 1268 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 1054 1083 - -
Bpe12g00646 1285 Pfam Protein kinase domain 887 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 82 102 - -
Bpe12g00646 1285 Gene3D Phosphorylase Kinase; domain 1 884 1197 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 1066 1083 - -
Bpe12g00646 1285 CDD STKc_MAST_like 893 1169 - -
Bpe12g00646 1285 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 1285 - -
Bpe12g00646 1285 Coils Coil 640 660 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 151 218 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 479 520 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 1207 1241 - -
Bpe12g00646 1285 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 23 1285 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 659 691 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 479 513 - -
Bpe12g00646 1285 Gene3D Transferase(Phosphotransferase) domain 1 967 1181 - -
Bpe12g00646 1285 SMART serkin_6 887 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 727 750 - -
Bpe12g00646 1285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672|GO:0006468
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 1207 1230 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 725 750 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 9 38 - -
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 235 250 - -
Bpe12g00646 1285 Coils Coil 315 335 - -
Bpe12g00646 1285 ProSiteProfiles Protein kinase domain profile. 887 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00646 1285 MobiDBLite consensus disorder prediction 1 250 - -
Bpe12g00646 1285 SUPERFAMILY Protein kinase-like (PK-like) 872 1199 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00392 Bpe-Chr12:9344961 Bpe12g00646 Bpe-Chr12:12105926 0 dispersed
Bpe12g00570 Bpe-Chr12:11520406 Bpe12g00646 Bpe-Chr12:12105926 1.68E-62 dispersed
Bpe12g00646 Bpe-Chr12:12105926 Bpe10g00480 Bpe-Chr10:12055396 1.93E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63635 PF00069 Pkinase 2.70E-52 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00646 - - csv:101214945 1805.42