Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00649 AGGTGGTATGTGGTCTGGACGCATTTCATACTGTTGTGGGCGGTGTATTCTTCCTTCTTCACTCCCTTGGAGTTTGGCTTCTTCAGAGGACTCCCTGAGAACCTCTTCCTTCTCGATAGCGCCGGTCAGATTGTCTTCTTCGTCGACATTTTCGTCCGCTTCTTCGTTGCATATCCAGACTTCCACGCACACCGCATCGTCTCTGATCGGAAACTCATCGCTCTCAGGTATTTGAAGTCTCGCTTTTTGGTCGATTTACTCGGTTGTATGCCCTGGGATGCTATCTACAAGGCATCTGGTAAGCAAGAGCCAGTCCGTTACCTGCTCTGGATTCGACTAAGTCGAGCATGCAGAGTTACAGAGTTTTTTGAGAAGTTAGAAAAAGATATTCGGATAAACTATCTTGGAAGTAGAATTGTGAAACTTTTTGTTGTTGAGCTTTATTGCACGCATACTGCAGCCTGCATTTTCTACTACCTGGCCACAACTCTGCCTCCCTCCAAAGAAGGGTACACATGGATAGGAAGTCTAAAGATGGGTGACTACAGCTATTCTCACTTTAGAGAAATTGATCTTTGGAAACGTTACGTCACATCATTATACTTTGCTGTTGTCACCATGGCAACTGTTGGTTATGGAGAAATACATGCAGTCAATGTCAGGGAAATGATATTCATCATGATATACGTGTCATTTGATATGATTCTTGGTGCTTACCTCCTTGGTAACATGGCAGCCTTGATAGTGAAAGGATCAAAAACAGAAAAGTTTAGGGATCAAGTGACAGACCTTATCAAATACATGAATAGAAACAAACTGGATAAACAGATAAGTAAAGAAATTAAATCCCATCTCCGATTGCAGTACGATCGTAGCTATGCTAAGTCTGACGTACTTCAGGATATTCCATCCTCTATTCGCTGCAAGATTTCACAGAACTTATATGAGCCATTCATCAAAAAGGTTCCCCTATTCAGAGGGTGTTCTATGGGATTTATAAAGCAAATTGCAAGCAGAGTCCATGAAGAATTTTTCCTCCCTGGAGAAGTGATTCTAGAGCAGGGAAATGTAATTGATCAATTGTATGTTGTGTGCCATGGCGAATTGGAGGAAGTTGACAAGGGTGAAGCGGATGAATCAGAAGAGCTGGTCAGGCGTCTGGAAACATACAGCTCGTTTGGTGAGATTTCCTTCCTTTGCAACAGTCCACAGCCATATACCGTTCTTGTTCGTGAACTATGCAGGGTTTTACGGCTTGATAAACAATCCTTCAGAGAAATCTTGGAGATTTACTTTTTAGATGGACGAACTATTTTAAATAACCTCCTTGAGGGAAAGGATTCAAATCTTCAAAACAAGCTTCAGGGCTCAGACGTAAGTATGTTCATTGGAAAACATGAATTTGAGTTAGCTATGAGGGTAAATTGTGCAGCCCATGACGGAGACTTTATCCAATTAAAACGTTTAATTCGAGCTGGGGCAGATCCTAAAAGGACTGATTATGATGGAAGATCTCCTTTGCATTTCTCTGCATCTAAAGGATACAAAGATATTGCTCGTTTTCTCATTGAACAAGGAGTGCCAGTTAATCTGTCAGATAAATTTGGGAACAGTCCCTTATTCGAAGCCGTAAAAAATGGACATGATGAAGTAGTTTCTCTCCTTGTTGGAGCTGGAGCAACACTTGGTATAGATGATACTGGTGGCTTTCTCTGCTCGACTGTAGCCAGGAGAGATCTGGATCTTTTAGTAAGAGTTTTGGCAAATGATATTGATCCAAATGCAAGAAATTACGATCACAGAACCCCACTTCACATAGCTGCGGCTGAAGGGTTGTATCTCATCTCAGAAGTACTTCTAAAAGCAGGAGCAAGTGTGTGGTTAAGGGACAGATGGGGGAATACACCACTAGATGAATCACGCATTAACGGAAATAAGAATTTGATCAAGCTACTTGATGTTGCAAGAACGTCTCAACTGTCCACTTTCTCTGGTTCTTATAAGAATCTTCAAGTTTCAGATGAAACGATCAGAAAGAAGTGCACTGTATTTGGCTTTCACCCATTTAAACCCAAGGAAGAAAGAGAAGATGGAGTGGTACTATGGGTCGCCCCAACCATTGAAGAGCTCATCAAGGCAGCCATGGAGGAGCTCAAATGTTCAAATGCCTCCTCCATTCTGTCAGAAAATGGGGGTAAAATTCTTGACCCTGCCATGATTGCCAACAATGATAAGCTTTTCTTAATTTAG 2250 41.82 RWYVVWTHFILLWAVYSSFFTPLEFGFFRGLPENLFLLDSAGQIVFFVDIFVRFFVAYPDFHAHRIVSDRKLIALRYLKSRFLVDLLGCMPWDAIYKASGKQEPVRYLLWIRLSRACRVTEFFEKLEKDIRINYLGSRIVKLFVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLKMGDYSYSHFREIDLWKRYVTSLYFAVVTMATVGYGEIHAVNVREMIFIMIYVSFDMILGAYLLGNMAALIVKGSKTEKFRDQVTDLIKYMNRNKLDKQISKEIKSHLRLQYDRSYAKSDVLQDIPSSIRCKISQNLYEPFIKKVPLFRGCSMGFIKQIASRVHEEFFLPGEVILEQGNVIDQLYVVCHGELEEVDKGEADESEELVRRLETYSSFGEISFLCNSPQPYTVLVRELCRVLRLDKQSFREILEIYFLDGRTILNNLLEGKDSNLQNKLQGSDVSMFIGKHEFELAMRVNCAAHDGDFIQLKRLIRAGADPKRTDYDGRSPLHFSASKGYKDIARFLIEQGVPVNLSDKFGNSPLFEAVKNGHDEVVSLLVGAGATLGIDDTGGFLCSTVARRDLDLLVRVLANDIDPNARNYDHRTPLHIAAAEGLYLISEVLLKAGASVWLRDRWGNTPLDESRINGNKNLIKLLDVARTSQLSTFSGSYKNLQVSDETIRKKCTVFGFHPFKPKEEREDGVVLWVAPTIEELIKAAMEELKCSNASSILSENGGKILDPAMIANNDKLFLI 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12151767 12159758 + Bpe005909.1 Bpe12g00649 112662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00649 749 PRINTS EAG/ELK/ERG potassium channel family signature 196 213 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe12g00649 749 PRINTS EAG/ELK/ERG potassium channel family signature 240 249 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe12g00649 749 PRINTS EAG/ELK/ERG potassium channel family signature 148 158 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe12g00649 749 PRINTS EAG/ELK/ERG potassium channel family signature 39 49 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe12g00649 749 SUPERFAMILY cAMP-binding domain-like 252 442 IPR018490 -
Bpe12g00649 749 Gene3D - 465 565 IPR036770 -
Bpe12g00649 749 Pfam Ankyrin repeats (3 copies) 477 563 IPR002110 GO:0005515
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat region circular profile. 502 534 - -
Bpe12g00649 749 SUPERFAMILY Voltage-gated potassium channels 2 249 - -
Bpe12g00649 749 Gene3D - 566 675 IPR036770 -
Bpe12g00649 749 Pfam KHA, dimerisation domain of potassium ion channel 679 748 IPR021789 -
Bpe12g00649 749 SUPERFAMILY Ankyrin repeat 475 652 IPR036770 -
Bpe12g00649 749 SMART cnmp_10 324 443 IPR000595 -
Bpe12g00649 749 Gene3D Jelly Rolls 294 459 IPR014710 -
Bpe12g00649 749 Gene3D - 4 250 - -
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat region circular profile. 535 566 - -
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Bpe12g00649 749 CDD CAP_ED 324 439 IPR000595 -
Bpe12g00649 749 ProSiteProfiles cAMP/cGMP binding motif profile. 324 428 IPR000595 -
Bpe12g00649 749 ProSiteProfiles KHA domain profile. 680 749 IPR021789 -
Bpe12g00649 749 Pfam Cyclic nucleotide-binding domain 344 429 IPR000595 -
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat profile. 502 534 IPR002110 GO:0005515
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat region circular profile. 599 631 - -
Bpe12g00649 749 Pfam Ion transport protein 5 249 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe12g00649 749 SMART ANK_2a 599 630 IPR002110 GO:0005515
Bpe12g00649 749 SMART ANK_2a 535 564 IPR002110 GO:0005515
Bpe12g00649 749 SMART ANK_2a 502 531 IPR002110 GO:0005515
Bpe12g00649 749 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG, ANKYRIN REPEAT-CONTAINING DOMAIN PROTEIN-RELATED 1 748 - -
Bpe12g00649 749 ProSiteProfiles Ankyrin repeat profile. 535 567 IPR002110 GO:0005515
Bpe12g00649 749 PANTHER POTASSIUM CHANNEL AKT1 1 748 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00448 Bpe-Chr8:2841352 Bpe12g00649 Bpe-Chr12:12151767 5.21E-109 dispersed
Bpe09g00719 Bpe-Chr9:15769287 Bpe12g00649 Bpe-Chr12:12151767 0 dispersed
Bpe12g00649 Bpe-Chr12:12151767 Bpe15g01241 Bpe-Chr15:20954241 3.67E-06 dispersed
Bpe12g00649 Bpe-Chr12:12151767 Bpe01g00497 Bpe-Chr1:3177400 2.25E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00649 K21867 - jre:108993203 1134.78