Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00653 ATGCAGAGCGCGGCTTTCAATTTCTCTCCTTCATTGCCTCTGCTGAAGCCTCGAAGGTCTTTGAATCCTATCTCGGCCTCTGGTTTCAACATCGTACGCTCCTCTCCCGCTTCTTCTAGCTGCAACGATCTTAGCTCCTCTGCTGGTATACCTCTGTTTTCTTCTGCTATTCCGCTCCGATCCTGGCCTTTGTCCTCGTCTTCTTCCTTCTCTCCTAAATTTAGCCCTTGGTCTGGTGCTCCGTCACTGCGGGATGACTCTGTCTCGAGTCGTTTTGAGGCCAAGGCGACCTCGGTACCGGAGAGTGCTGGAGAGAGCGAGGAATCCAAGAGTTTGTTCAAGACGCTGGAGTTGGGAGCGTTGTTCGGACTCTGGTACCTCTTCAACATATACTTCAATATCTACAATAAGCAGGTACTGAAGGTGTATCCATTCCCCGTTACAGTCACTACAATTCAATTTGCTGTCGGATCTGTGCTTGTTCTTTTTATGTGGAGTTTTAATCTCTATAAGAAGCCTAGAGTTAGTGGCGCACAGCTTGCAGCATTACTGCCACTGGCAGTTGTTCACACGTTAGGAAACCTTTTCACCAACATGAGTCTTGGTAAAGTGGCTGTATCATTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCTCTGTCATTCTATCTGCAATGTTTCTCGGGGAGAGGCCTACACTATGGGTGGTTGCTTCTCTTTTACCAATTGTTGGTGGTGTGGGATTGGCGTCGGCCACAGAGGCTTCATTCAACTGGTCTGGATTTTGGAGTGCTATGGCTTCCAATTTGACCAATCAATCCCGAAATGTCCTCAGCAAAAAGTTCATGATAAGAAAAGAGGATTCCTTGGACAACATCACTCTCTTTTCGATAATTACAATCATGTCCTTCATTTTGTTAGCTCCCTTTACTCTCTTCATGGAAGGTGTTAAGTTCACTCCTGCTTATCTGCAGTCTGCAGGATTGAATGTTAGTCAATTAGCCACTAGGTCTCTTCTTGCAGCCTTGTGTTTCCATGCTTATCAACAGGTGTCTTATATGATATTGCAAAGGGTATCTCCTGTCACTCACTCTGTCGGAAATTGTGTAAAGCGGGTGGTGGTCATTGTGAGCTCAGTCATCTTCTTCCAAACACCTGTCTCCCCGATCAATTCTCTTGGCACTGGAGTGGCTCTTGCTGGAGTTTTCCTTTATTCAAGGGTGAAACGCATTAAGGCGAAGCTGAAGAGCGCTTAG 1257 46.3 MQSAAFNFSPSLPLLKPRRSLNPISASGFNIVRSSPASSSCNDLSSSAGIPLFSSAIPLRSWPLSSSSSFSPKFSPWSGAPSLRDDSVSSRFEAKATSVPESAGESEESKSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVYPFPVTVTTIQFAVGSVLVLFMWSFNLYKKPRVSGAQLAALLPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTLWVVASLLPIVGGVGLASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIRKEDSLDNITLFSIITIMSFILLAPFTLFMEGVKFTPAYLQSAGLNVSQLATRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGVALAGVFLYSRVKRIKAKLKSA 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12184875 12187934 - Bpe005913.1 Bpe12g00653 112666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00653 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 251 - -
Bpe12g00653 418 Coils Coil 408 418 - -
Bpe12g00653 418 Pfam Triose-phosphate Transporter family 117 406 IPR004853 -
Bpe12g00653 418 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 52 393 - -
Bpe12g00653 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 301 409 - -
Bpe12g00653 418 PANTHER SOLUTE CARRIER FAMILY 35 52 393 - -
Bpe12g00653 418 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 116 414 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01514 Bpe-Chr11:11242687 Bpe12g00653 Bpe-Chr12:12184875 1.97E-150 dispersed
Bpe12g00653 Bpe-Chr12:12184875 Bpe13g00243 Bpe-Chr13:10401834 0 dispersed
Bpe12g00653 Bpe-Chr12:12184875 Bpe07g00843 Bpe-Chr7:14594929 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00653 K15283 - csv:101203848 592.038