Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00669 ATGATTCCGAATTCGAATTCCTCCTCAATCGGATCGTTTTCCACTTCTTTTGTCTTCTCCATCTTGGCGGAGGTCGATTCCAGTCCCGGATTTGGGCTCGCCTTCGTCCTCTCTAATACTACCTCTCCTCCCGGGGCCATAGCCGGCCAGTACTTCGGCCTCTTCACTAATGTCACAATACCAGCGGTGGCTCCTCTCCTTGCCGTCGAATTCGATGTCGGCCAGAATCCAGAGTTTAATGATCCTAATAACAATCACATTGGGATCAATCTGAACAGGGCTGAATCGGCGAAGACTCAGACGGCTGGTTATTACGATTCCACCGGAGTATTTGTTACAGTGGGGATGAGAACTGGTCAGAATATTCACGCTTGGATCGATTTCGATGGAGGTAACTTCGAAATTAATGTAACGGTGGCGCCGGTGGGGGTGATTCGCCCCTTACGACCGTCTCTGAATTTCAGAGATCCGGTTATTGCGAACTACGTCTCGGCCGAGATGTTTGTTGGATTTTCAGGATCGAAAACAACCTGGGTCGAGCCACAGAGAGTTTTAGCTTGGAGTTTGAGCGATTCGGGGACTGCAAGAGAAATAAATCGGACGGACTTTCCTCTTTTTATCCCGGAATCGAGGTCTTCTCTATCCGCCGGCGCAATTGCTGGGATTCTAATTGGTGCCGTAGTGTTTTTTATTATCCTCGCATCCGTGTGGTACTGGTTTTGGCGAAAGAGGAGGTTGAGAGAGGAGGAAGACAATGAAATCGAGGATTGGGAGATGGAATATTGGCCTCATAGATTCTCCTTCGAGGAGCTATCTGCAGCGACGGAGAAATTCTCCGACGACCACCTTCTAGGGTTTGGTGGATTTGGTAAAGTGTACAAAGGAACTTTACCCAACAACTCAATAATCGCAGTAAAATGCGTAAACCACGATTCAAAGCAAGGGCTTAAGGAATTCATGGCGGAAATCTCAAGTATGGGGAGATTACAGCACAAAAATTTAGTCCAAATGCGAGGATGGTGCAGAAAGAGGAACCAATTGATCCTTGTTTACGATTTCATGCCCAACGGAAGCCTCAACCGATGGATATTCGACAAATCGGAGAACCTCCTAGGATGGGACCACCGCAGGAGAGTCCTGAACGACGTCGCGGAAGGACTAAATTATCTCCACCATGGATGGGACCAAGTAGTGATTCACAGAGACATAAAATCGAGCAACATTCTGCTCGATTCCGACATGCGAGGCCGGCTCGGAGATTTCGGGCTGGCGAAATTGTACCAGCACGGTGCCGTTCCGAACACCACTCGAATCGTCGGAACTCTAGGGTACTTAGCTCCGGAGGTAGCTACATTGGCGGTGCCGACGGAAGCGAGCGACGTTTTCAGCTTTGGGGTGGTGATCCTGGAGGTGGTTTGCGGACGACGGCCGATAGAAGTCGCGTTTGAGGAAGATGAAGTGGTGCTGATAGATTGGGTTAGAGATCTATATGCGAGAGGGAGAGCAATCGAGGCTGTGGATCGGAGAATGGAGGGAGAGTACGAAGCGGCGGAAGTGGAGATGATTTTGAAGCTGGGTTTGACCTGTAGTCACCCTGATCCTCAACGGCGGCCGACCATGAACGATGTCGTCGCCATCTTGATTGGGGAGAAGTCGGCGGCTGCTCCGGCTGTGCTGTTGTCTGATTTGGCACCTCTCGAAGGTGTAAATATTCTCAATCTTAGCTAA 1728 49.88 MIPNSNSSSIGSFSTSFVFSILAEVDSSPGFGLAFVLSNTTSPPGAIAGQYFGLFTNVTIPAVAPLLAVEFDVGQNPEFNDPNNNHIGINLNRAESAKTQTAGYYDSTGVFVTVGMRTGQNIHAWIDFDGGNFEINVTVAPVGVIRPLRPSLNFRDPVIANYVSAEMFVGFSGSKTTWVEPQRVLAWSLSDSGTAREINRTDFPLFIPESRSSLSAGAIAGILIGAVVFFIILASVWYWFWRKRRLREEEDNEIEDWEMEYWPHRFSFEELSAATEKFSDDHLLGFGGFGKVYKGTLPNNSIIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKRNQLILVYDFMPNGSLNRWIFDKSENLLGWDHRRRVLNDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQHGAVPNTTRIVGTLGYLAPEVATLAVPTEASDVFSFGVVILEVVCGRRPIEVAFEEDEVVLIDWVRDLYARGRAIEAVDRRMEGEYEAAEVEMILKLGLTCSHPDPQRRPTMNDVVAILIGEKSAAAPAVLLSDLAPLEGVNILNLS 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12342232 12343959 - Bpe005929.1 Bpe12g00669 112682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00669 575 Pfam Protein kinase domain 279 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00669 575 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 7 565 - -
Bpe12g00669 575 SUPERFAMILY Protein kinase-like (PK-like) 255 547 IPR011009 -
Bpe12g00669 575 CDD lectin_legume_LecRK_Arcelin_ConA 17 193 IPR001220 GO:0030246
Bpe12g00669 575 Gene3D - 1 204 - -
Bpe12g00669 575 Gene3D Phosphorylase Kinase; domain 1 240 353 - -
Bpe12g00669 575 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Bpe12g00669 575 ProSiteProfiles Protein kinase domain profile. 278 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00669 575 SMART serkin_6 278 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00669 575 CDD STKc_IRAK 284 547 - -
Bpe12g00669 575 PANTHER - 7 565 - -
Bpe12g00669 575 Pfam Legume lectin domain 5 201 IPR001220 GO:0030246
Bpe12g00669 575 Gene3D Transferase(Phosphotransferase) domain 1 354 557 - -
Bpe12g00669 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Bpe12g00669 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 4 57 IPR013320 -
Bpe12g00669 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 345 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00750 Bpe-Chr4:4782370 Bpe12g00669 Bpe-Chr12:12342232 8.44E-155 dispersed
Bpe04g00752 Bpe-Chr4:4806396 Bpe12g00669 Bpe-Chr12:12342232 1.35E-149 dispersed
Bpe12g00669 Bpe-Chr12:12342232 Bpe03g00755 Bpe-Chr3:27604068 1.25E-120 dispersed
Bpe12g00669 Bpe-Chr12:12342232 Bpe02g00866 Bpe-Chr2:6553744 4.76E-165 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63636 PF00069 Pkinase 5.10E-50 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00669 - - jre:108985873 858.596